Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1568
(514 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28412-4|AAC46593.1| 269|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 30 0.85
Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical... 28 4.5
Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical pr... 27 6.0
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 27 6.0
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 27 6.0
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 27 6.0
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 27 7.9
U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical pr... 27 7.9
U41021-9|AAQ81276.1| 408|Caenorhabditis elegans Temporarily ass... 27 7.9
U41021-8|AAQ81275.1| 406|Caenorhabditis elegans Temporarily ass... 27 7.9
>U28412-4|AAC46593.1| 269|Caenorhabditis elegans Hypothetical
protein T19C3.2 protein.
Length = 269
Score = 31.9 bits (69), Expect = 0.28
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = -3
Query: 473 LYCLPDPAPSASACR--PNPTRPGPQS-QSLFRSYGSNLPTSLTYIILSTRGSSPWRPAA 303
L C+P+ PS S CR +P P PQ+ + L+R T LT I SP+ +A
Sbjct: 180 LQCVPEHRPSGSVCRCCCHPYTPNPQTFEYLYRKAYRKAETPLTSIF-----RSPFLGSA 234
Query: 302 DMGTNRRDISTYIPHLNF 249
G +S++ H F
Sbjct: 235 HFGGALLRLSSHFIHSMF 252
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 30.3 bits (65), Expect = 0.85
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -3
Query: 428 PNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTR-GSSP--WRPAADMGTNR 285
P P+ P P ++ +S NLP S+ + R G SP W P A TNR
Sbjct: 411 PVPSNPPPSNEQQSQSRVQNLPDSVRSAVSPRRSGKSPRQWPPPAMPTTNR 461
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 30.3 bits (65), Expect = 0.85
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -3
Query: 428 PNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTR-GSSP--WRPAADMGTNR 285
P P+ P P ++ +S NLP S+ + R G SP W P A TNR
Sbjct: 411 PVPSNPPPSNEQQSQSRVQNLPDSVRSAVSPRRSGKSPRQWPPPAMPTTNR 461
>Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical protein
T12G3.2b protein.
Length = 912
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = -3
Query: 452 APSASACRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDIS 273
AP+ A PT P L RS +LP S T + +S SP +P + + + +
Sbjct: 834 APAPIARNMGPTMISPPPAKLVRSDSDHLPPSNTMMRVS---CSPPKPPSQLPSPNQ--- 887
Query: 272 TYIPHLNFQGPQRVSGHRRK 213
T IPH+ G + H ++
Sbjct: 888 TTIPHMYNNGIPMIYEHHQQ 907
>AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical
protein C31B8.1 protein.
Length = 229
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 425 NPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSP 318
+P + P +Q LF S+G LP I + SSP
Sbjct: 19 SPFKASPSNQKLFISFGVGLPIFFQMCIFTASYSSP 54
>Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical
protein R11A8.1 protein.
Length = 552
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = -1
Query: 247 KVRREYPDTAANAVLFA---FRT--ISPFYRIPWNSNAQAEKKTLPGP 119
K+ +E D A N + FR I+PF P+ +N Q + +PGP
Sbjct: 435 KIEKEIADVAENQIRRIEENFRNPFIAPFAFFPYQNNFQMAPQNVPGP 482
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 464 LPDPAPSASACRPNPTRPGPQSQS 393
LPDP+ A RP+ PGPQ S
Sbjct: 54 LPDPSSPPPAPRPSGQPPGPQGPS 77
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 231 IRTPPQMRCSSRSEPYLPSIGFHGT 157
I T Q + SS +P+LP++GF GT
Sbjct: 299 IVTISQGKASSLYDPHLPTVGFDGT 323
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -2
Query: 207 CSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIETVP 34
C++ P+L I T+ +RQ + P+L +A H + FK E T+P
Sbjct: 80 CTTNFTPFLRPITVPVTKGVRQGDPISPNLFSACLEHVFRKLSCIEFKGEAEDYNTIP 137
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 195 SEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIE 43
S+ LP+ GF T K +P+ S A +G RT F EGT E
Sbjct: 1216 SKSKLPTFGFFSKTTKTTKTTGYPETSEAYTGELDTTDRTHDF--EGTSFE 1264
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 195 SEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIE 43
S+ LP+ GF T K +P+ S A +G RT F EGT E
Sbjct: 1205 SKSKLPTFGFFSKTTKTTKTTGYPETSEAYTGELDTTDRTHDF--EGTSFE 1253
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 195 SEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIE 43
S+ LP+ GF T K +P+ S A +G RT F EGT E
Sbjct: 1205 SKSKLPTFGFFSKTTKTTKTTGYPETSEAYTGELDTTDRTHDF--EGTSFE 1253
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 195 SEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIE 43
S+ LP+ GF T K +P+ S A +G RT F EGT E
Sbjct: 1216 SKSKLPTFGFFSKTTKTTKTTGYPETSEAYTGELDTTDRTHDF--EGTSFE 1264
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 195 SEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIE 43
S+ LP+ GF T K +P+ S A +G RT F EGT E
Sbjct: 1205 SKSKLPTFGFFSKTTKTTKTTGYPETSEAYTGELDTTDRTHDF--EGTSFE 1253
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 195 SEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIE 43
S+ LP+ GF T K +P+ S A +G RT F EGT E
Sbjct: 1205 SKSKLPTFGFFSKTTKTTKTTGYPETSEAYTGELDTTDRTHDF--EGTSFE 1253
>U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical
protein D1014.7 protein.
Length = 492
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -2
Query: 252 FSRSAESIRTPPQMRCSSRSEP--YLPSIGFHGTRT 151
FS S E+ T Q R + S P YLPSIG + T T
Sbjct: 11 FSASNENNETIKQGRDADSSSPSEYLPSIGHYFTHT 46
>U41021-9|AAQ81276.1| 408|Caenorhabditis elegans Temporarily
assigned gene nameprotein 24, isoform b protein.
Length = 408
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 511 GYRAPPRVFFFFFYIVY 461
G+ APP VF FFF++ Y
Sbjct: 352 GHEAPPLVFKFFFWLGY 368
>U41021-8|AAQ81275.1| 406|Caenorhabditis elegans Temporarily
assigned gene nameprotein 24, isoform a protein.
Length = 406
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 511 GYRAPPRVFFFFFYIVY 461
G+ APP VF FFF++ Y
Sbjct: 350 GHEAPPLVFKFFFWLGY 366
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,840,088
Number of Sequences: 27780
Number of extensions: 299074
Number of successful extensions: 1258
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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