Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1567
         (324 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126441-1|AAI26442.1|  387|Homo sapiens BarH-like homeobox 2 pr...    32   0.35 
BC126439-1|AAI26440.1|  387|Homo sapiens BarH-like homeobox 2 pr...    32   0.35 
AY338397-1|AAQ01189.1|  387|Homo sapiens BARH-like 2 protein pro...    32   0.35 
U05596-1|AAA50748.1| 1232|Homo sapiens anion exchanger 3 brain i...    28   7.4  
BC146656-1|AAI46657.1| 1232|Homo sapiens solute carrier family 4...    28   7.4  
AY142112-1|AAN34939.1| 1259|Homo sapiens anion exchanger SLC4A3 ...    28   7.4  

>BC126441-1|AAI26442.1|  387|Homo sapiens BarH-like homeobox 2
           protein.
          Length = 387

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 56  PLAPADFTEHHMVHLLHHTRQPQSSKATPPQRM 154
           P   AD T+HH  H LHH++QP    A P Q +
Sbjct: 75  PHLVADATQHH--HHLHHSQQPPPPAAAPTQSL 105


>BC126439-1|AAI26440.1|  387|Homo sapiens BarH-like homeobox 2
           protein.
          Length = 387

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 56  PLAPADFTEHHMVHLLHHTRQPQSSKATPPQRM 154
           P   AD T+HH  H LHH++QP    A P Q +
Sbjct: 75  PHLVADATQHH--HHLHHSQQPPPPAAAPTQSL 105


>AY338397-1|AAQ01189.1|  387|Homo sapiens BARH-like 2 protein
           protein.
          Length = 387

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 56  PLAPADFTEHHMVHLLHHTRQPQSSKATPPQRM 154
           P   AD T+HH  H LHH++QP    A P Q +
Sbjct: 75  PHLVADATQHH--HHLHHSQQPPPPAAAPTQSL 105


>U05596-1|AAA50748.1| 1232|Homo sapiens anion exchanger 3 brain
           isoform protein.
          Length = 1232

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 53  RPLAPADFTEHHMVHLLHHTRQPQSSKATPPQRM 154
           R  +  DF  H   H  HHT  P S++  PP ++
Sbjct: 64  RSYSERDFEFHR--HTSHHTHHPLSARLPPPHKL 95


>BC146656-1|AAI46657.1| 1232|Homo sapiens solute carrier family 4,
           anion exchanger, member 3 protein.
          Length = 1232

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 53  RPLAPADFTEHHMVHLLHHTRQPQSSKATPPQRM 154
           R  +  DF  H   H  HHT  P S++  PP ++
Sbjct: 64  RSYSERDFEFHR--HTSHHTHHPLSARLPPPHKL 95


>AY142112-1|AAN34939.1| 1259|Homo sapiens anion exchanger SLC4A3
           protein.
          Length = 1259

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 53  RPLAPADFTEHHMVHLLHHTRQPQSSKATPPQRM 154
           R  +  DF  H   H  HHT  P S++  PP ++
Sbjct: 64  RSYSERDFEFHR--HTSHHTHHPLSARLPPPHKL 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,552,894
Number of Sequences: 237096
Number of extensions: 448792
Number of successful extensions: 1354
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)