Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1567
         (324 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              22   2.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   2.1  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          20   8.6  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +1

Query: 4  LYNKMAAKLVILLCALATARA 66
          LYN +   +++++C +   RA
Sbjct: 2  LYNNLTIVIILIMCGVQNLRA 22


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +2

Query: 83  HHMVHLLHHTRQPQSSKATPPQRMLH 160
           HH +H  H   QPQ  +     +  H
Sbjct: 169 HHQMHTQHPHMQPQQGQHQSQAQQQH 194



 Score = 21.4 bits (43), Expect = 2.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 119 AAAYDAIGAPYDAP*SPP 66
           AAA D  G+  D P SPP
Sbjct: 145 AAAVDHQGSVLDGPDSPP 162


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 75  KSAGASGRQSAQ 40
           K AGASGR+ A+
Sbjct: 97  KRAGASGRREAK 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,745
Number of Sequences: 438
Number of extensions: 729
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)