Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1566
         (743 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533489-1|CAG38520.1|  127|Homo sapiens PAIP2 protein.                36   0.15 
BC062718-1|AAH62718.1|  127|Homo sapiens poly(A) binding protein...    36   0.15 
BC048106-1|AAH48106.1|  127|Homo sapiens PAIP2 protein protein.        36   0.15 
BC039337-1|AAH39337.1|  127|Homo sapiens PAIP2 protein protein.        36   0.15 
BC001716-1|AAH01716.1|  127|Homo sapiens poly(A) binding protein...    36   0.15 
AF317675-1|AAK11562.1|  127|Homo sapiens polyadenylate binding p...    36   0.15 
AB032981-1|BAA86469.1|  145|Homo sapiens KIAA1155 protein protein.     36   0.20 

>CR533489-1|CAG38520.1|  127|Homo sapiens PAIP2 protein.
          Length = 127

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = +2

Query: 644 FADYMWMENEEKFDKQV 694
           FA+YMWMENEE+F++Q+
Sbjct: 31  FAEYMWMENEEEFNRQI 47


>BC062718-1|AAH62718.1|  127|Homo sapiens poly(A) binding protein
           interacting protein 2 protein.
          Length = 127

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = +2

Query: 644 FADYMWMENEEKFDKQV 694
           FA+YMWMENEE+F++Q+
Sbjct: 31  FAEYMWMENEEEFNRQI 47


>BC048106-1|AAH48106.1|  127|Homo sapiens PAIP2 protein protein.
          Length = 127

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = +2

Query: 644 FADYMWMENEEKFDKQV 694
           FA+YMWMENEE+F++Q+
Sbjct: 31  FAEYMWMENEEEFNRQI 47


>BC039337-1|AAH39337.1|  127|Homo sapiens PAIP2 protein protein.
          Length = 127

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = +2

Query: 644 FADYMWMENEEKFDKQV 694
           FA+YMWMENEE+F++Q+
Sbjct: 31  FAEYMWMENEEEFNRQI 47


>BC001716-1|AAH01716.1|  127|Homo sapiens poly(A) binding protein
           interacting protein 2 protein.
          Length = 127

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = +2

Query: 644 FADYMWMENEEKFDKQV 694
           FA+YMWMENEE+F++Q+
Sbjct: 31  FAEYMWMENEEEFNRQI 47


>AF317675-1|AAK11562.1|  127|Homo sapiens polyadenylate binding
           protein-interacting protein 2 protein.
          Length = 127

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = +2

Query: 644 FADYMWMENEEKFDKQV 694
           FA+YMWMENEE+F++Q+
Sbjct: 31  FAEYMWMENEEEFNRQI 47


>AB032981-1|BAA86469.1|  145|Homo sapiens KIAA1155 protein protein.
          Length = 145

 Score = 35.5 bits (78), Expect = 0.20
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = +2

Query: 644 FADYMWMENEEKFDKQV 694
           FA+YMWMENEE F++QV
Sbjct: 53  FAEYMWMENEEDFNRQV 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,451,507
Number of Sequences: 237096
Number of extensions: 1993261
Number of successful extensions: 2632
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2632
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)