Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1561
(475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 283 3e-77
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 283 3e-77
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 283 3e-77
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 238 1e-63
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 179 8e-46
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 179 8e-46
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 161 2e-40
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 131 3e-31
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 83 1e-16
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 83 1e-16
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 83 1e-16
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 80 7e-16
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 80 7e-16
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 58 4e-09
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 1e-08
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 43 1e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 2e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.004
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.045
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.045
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.079
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 33 0.14
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.56
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 30 0.98
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 30 0.98
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 0.98
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 3.9
CU457740-1|CAM36331.1| 122|Caenorhabditis elegans Hypothetical ... 27 5.2
Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF016424-4|AAT68893.1| 152|Caenorhabditis elegans Hypothetical ... 27 6.9
AF016424-3|AAB65330.1| 251|Caenorhabditis elegans Hypothetical ... 27 6.9
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 283 bits (695), Expect = 3e-77
Identities = 131/138 (94%), Positives = 135/138 (97%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDK 229
+EK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 409
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 410 FEAGISKNGQTREHALLA 463
FEAGISKNGQTREHALLA
Sbjct: 123 FEAGISKNGQTREHALLA 140
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 283 bits (695), Expect = 3e-77
Identities = 131/138 (94%), Positives = 135/138 (97%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDK 229
+EK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 409
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 410 FEAGISKNGQTREHALLA 463
FEAGISKNGQTREHALLA
Sbjct: 123 FEAGISKNGQTREHALLA 140
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 283 bits (695), Expect = 3e-77
Identities = 131/138 (94%), Positives = 135/138 (97%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDK 229
+EK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 409
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 410 FEAGISKNGQTREHALLA 463
FEAGISKNGQTREHALLA
Sbjct: 123 FEAGISKNGQTREHALLA 140
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 238 bits (583), Expect = 1e-63
Identities = 109/115 (94%), Positives = 113/115 (98%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDK 229
+EK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 394
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 179 bits (436), Expect = 8e-46
Identities = 81/136 (59%), Positives = 102/136 (75%)
Frame = +2
Query: 53 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDKL 232
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 233 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 412
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 413 EAGISKNGQTREHALL 460
E G GQT+EHALL
Sbjct: 287 ETGFENGGQTKEHALL 302
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 179 bits (436), Expect = 8e-46
Identities = 81/136 (59%), Positives = 102/136 (75%)
Frame = +2
Query: 53 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDKL 232
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 233 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 412
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 413 EAGISKNGQTREHALL 460
E G GQT+EHALL
Sbjct: 305 ETGFENGGQTKEHALL 320
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 161 bits (392), Expect = 2e-40
Identities = 71/140 (50%), Positives = 100/140 (71%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDKLK 235
K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA E G+ S+ +W +D
Sbjct: 107 KEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTND 166
Query: 236 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 415
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE
Sbjct: 167 EEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFE 226
Query: 416 AGISKNGQTREHALLAFPSG 475
G + GQTREH++L +G
Sbjct: 227 TGFDRGGQTREHSMLVKTAG 246
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 131 bits (316), Expect = 3e-31
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDK 229
+EK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA EMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 230 LKAER 244
LK +
Sbjct: 63 LKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 83.0 bits (196), Expect = 1e-16
Identities = 53/138 (38%), Positives = 71/138 (51%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDK 229
R+K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 409
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 410 FEAGISKNGQTREHALLA 463
QTREH LLA
Sbjct: 150 MP-------QTREHLLLA 160
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 83.0 bits (196), Expect = 1e-16
Identities = 53/138 (38%), Positives = 71/138 (51%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDK 229
R+K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 409
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 410 FEAGISKNGQTREHALLA 463
QTREH LLA
Sbjct: 151 MP-------QTREHLLLA 161
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 83.0 bits (196), Expect = 1e-16
Identities = 53/138 (38%), Positives = 71/138 (51%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDK 229
R+K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 409
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 410 FEAGISKNGQTREHALLA 463
QTREH LLA
Sbjct: 151 MP-------QTREHLLLA 161
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 80.2 bits (189), Expect = 7e-16
Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Frame = +2
Query: 2 SGITRSL*SVTNQKWAREKTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEK 175
+ ITR+ + A K ++N+ IGH+D GK+T T + + G K KF++
Sbjct: 25 NSITRNAVAFFATAAATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE 82
Query: 176 EAHEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 355
+DK K E++RGITI++A +E+ + D PGH DFIKNMI
Sbjct: 83 ---------------IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMIC 127
Query: 356 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 463
GTSQ D AVL++AA G E QT+EH +LA
Sbjct: 128 GTSQMDVAVLVIAATDGVME-------QTKEHLILA 156
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 80.2 bits (189), Expect = 7e-16
Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Frame = +2
Query: 2 SGITRSL*SVTNQKWAREKTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEK 175
+ ITR+ + A K ++N+ IGH+D GK+T T + + G K KF++
Sbjct: 25 NSITRNAVAFFATAAATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE 82
Query: 176 EAHEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 355
+DK K E++RGITI++A +E+ + D PGH DFIKNMI
Sbjct: 83 ---------------IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMIC 127
Query: 356 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 463
GTSQ D AVL++AA G E QT+EH +LA
Sbjct: 128 GTSQMDVAVLVIAATDGVME-------QTKEHLILA 156
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 57.6 bits (133), Expect = 4e-09
Identities = 39/113 (34%), Positives = 54/113 (47%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDKLKAERE 247
NI + H+DSGK+T T ++Y G ID HE+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 248 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
RGITI A + + IID PGH DF + D AVL++ G G
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 56.4 bits (130), Expect = 1e-08
Identities = 37/113 (32%), Positives = 52/113 (46%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDKLKAERE 247
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 248 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 1e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDKLKAERE 247
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 248 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 42.7 bits (96), Expect = 1e-04
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAHE----MGKGS 202
R++ N+ VI HVD GKST T L+ K G I K +F K+ E + +
Sbjct: 15 RKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTA 74
Query: 203 FKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 370
+ L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 75 ISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVT 134
Query: 371 DCAVLIVAAGTG 406
D A+++V +G
Sbjct: 135 DGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 42.3 bits (95), Expect = 2e-04
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAHE----MGKGS 202
R++ N+ VI HVD GKST T L+ K G I K +F K+ E + +
Sbjct: 15 RKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTA 74
Query: 203 FKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 370
+ L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 75 ISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVT 134
Query: 371 DCAVLIVAAGTG 406
D A+++V +G
Sbjct: 135 DGALVVVDCVSG 146
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.3 bits (85), Expect(2) = 2e-04
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 191 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 367
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 368 ADCAVLIVAAGTG 406
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
Score = 23.0 bits (47), Expect(2) = 2e-04
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 71 IVVIGHVDSGKST 109
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 37.9 bits (84), Expect = 0.004
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 62 HI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDKLKA 238
HI N+ ++ HVD GK++ L+ I R G +Y +D +
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSRED 63
Query: 239 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 391
E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 37.9 bits (84), Expect = 0.004
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 62 HI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDKLKA 238
HI N+ ++ HVD GK++ L+ I R G +Y +D +
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSRED 63
Query: 239 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 391
E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.045
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDKLKAERE 247
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 248 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.045
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDKLKAERE 247
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 248 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 33.5 bits (73), Expect = 0.079
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Frame = +2
Query: 65 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAHEMGKGSFKYAWVLDKLKAER 244
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLTRRIA-------------------ELGSTSAFDAHATSTTTDGI 54
Query: 245 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 421
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 422 ISKNGQTREHALLA 463
I QT EH LLA
Sbjct: 109 IQP--QTAEHLLLA 120
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 32.7 bits (71), Expect = 0.14
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Frame = +2
Query: 65 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAHEMGKGSFKYAWVLDKLKA 238
+ + V+G D GKST G L C G K I F + HE+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 239 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAG 400
RG ++ A E S VT+ID G + K I G + A L+VAA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAAD 285
Query: 401 TG 406
G
Sbjct: 286 RG 287
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.56
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 299 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 394
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.9 bits (64), Expect = 0.98
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 146 DKRTIEKFEKEAHEMGKGSFKYAWVLDKLKAERE 247
+KR ++ EKE ++ F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.9 bits (64), Expect = 0.98
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 146 DKRTIEKFEKEAHEMGKGSFKYAWVLDKLKAERE 247
+KR ++ EKE ++ F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 0.98
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 308 IIDAPGHRDFIKNMITGTSQADCAVLIV 391
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 65 INIVVIGHVDSGKSTTT 115
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 302 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 397
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>CU457740-1|CAM36331.1| 122|Caenorhabditis elegans Hypothetical
protein C50E10.1 protein.
Length = 122
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 474 PEGKASKACSRVCPFLEIPASNSPVPAATMSTAQSA*EVPVIMF 343
P ++ ++ F IP+ N P +AT ST+ E+P I F
Sbjct: 43 PTSPSTDIGEQMASFWNIPSPNPPATSATSSTSPEE-EIPCICF 85
>Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical
protein F56H9.4 protein.
Length = 390
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 50 REKTHINIVVIGHVDSGKSTTTGHL-IYKCGG 142
R+K + +++IG +SGKST + I CGG
Sbjct: 40 RKKKALKLLIIGPGESGKSTIVKQVRILHCGG 71
>AF016424-4|AAT68893.1| 152|Caenorhabditis elegans Hypothetical
protein F39G3.5b protein.
Length = 152
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 199 SFTHFVGLLLELLDGTFVNT 140
S THFVG + L+G F+NT
Sbjct: 21 SITHFVGFITICLNGYFLNT 40
>AF016424-3|AAB65330.1| 251|Caenorhabditis elegans Hypothetical
protein F39G3.5a protein.
Length = 251
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 199 SFTHFVGLLLELLDGTFVNT 140
S THFVG + L+G F+NT
Sbjct: 21 SITHFVGFITICLNGYFLNT 40
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,125,541
Number of Sequences: 27780
Number of extensions: 224657
Number of successful extensions: 746
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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