Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1557
(657 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 124 1e-28
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 113 2e-25
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 113 3e-25
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 113 3e-25
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 109 4e-24
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 109 4e-24
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 107 1e-23
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 106 3e-23
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 105 4e-23
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 101 7e-22
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 101 7e-22
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 101 7e-22
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 101 7e-22
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 101 7e-22
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 100 2e-21
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 98 8e-21
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 95 1e-19
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 95 1e-19
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 95 1e-19
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 95 1e-19
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 88 1e-17
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 71 2e-12
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 52 5e-07
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 44 2e-04
AY069347-1|AAL39492.1| 396|Drosophila melanogaster LD05576p pro... 32 0.60
AE014134-3030|AAF53752.1| 396|Drosophila melanogaster CG10495-P... 32 0.60
AY052073-1|AAK93497.1| 860|Drosophila melanogaster SD02969p pro... 27 3.8
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 124 bits (298), Expect = 1e-28
Identities = 69/188 (36%), Positives = 101/188 (53%), Gaps = 8/188 (4%)
Frame = +1
Query: 1 DFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVW 180
D ++ + IL D QFGFR HS V+QVHRLT+HIL + + Y A+F D+ +AFD+VW
Sbjct: 537 DIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKE--YCNAVFIDMQQAFDRVW 594
Query: 181 HNGLIFRLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXX 360
H+GLI ++ + P +++ +L +R F RV + S PR + AGVPQG
Sbjct: 595 HDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYS 653
Query: 361 XXXNDIPRSPPTH--------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWR 516
D+P H LA +ADD + YSS + A+ LQ L W ++W
Sbjct: 654 VFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWI 713
Query: 517 IDINPAKS 540
+ +NP K+
Sbjct: 714 LKVNPQKT 721
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 113 bits (272), Expect = 2e-25
Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 5/188 (2%)
Frame = +1
Query: 7 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHN 186
+ ++GI + QFGFR H V+Q+HR+ E IL + + Y +LF D+ +AFD+VWH
Sbjct: 538 MEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSKE--YCNSLFLDIREAFDRVWHI 595
Query: 187 GLIFRLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXX 366
GL ++ +P +++ +L R F R S+ + AGVPQG
Sbjct: 596 GLQLKI-KQTLPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLY 654
Query: 367 XNDIPRSP-----PTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINP 531
+D+P+ + LA FADD V Y SR + A +Q A +W R+W I IN
Sbjct: 655 SHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINS 714
Query: 532 AKSTAVLF 555
+KS V F
Sbjct: 715 SKSNNVCF 722
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 113 bits (271), Expect = 3e-25
Identities = 61/184 (33%), Positives = 100/184 (54%)
Frame = +1
Query: 4 FVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWH 183
F+ L Q+GFR + + +L +I + + + G + D+ AFD VWH
Sbjct: 562 FLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWH 619
Query: 184 NGLIFRLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXX 363
+GL+ +L +G P L+ I+++FL++R F + ++S+ R L AGVPQG
Sbjct: 620 DGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNI 679
Query: 364 XXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKST 543
+DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP K+
Sbjct: 680 FTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTN 739
Query: 544 AVLF 555
A+ F
Sbjct: 740 AIFF 743
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 113 bits (271), Expect = 3e-25
Identities = 61/184 (33%), Positives = 100/184 (54%)
Frame = +1
Query: 4 FVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWH 183
F+ L Q+GFR + + +L +I + + + G + D+ AFD VWH
Sbjct: 510 FLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWH 567
Query: 184 NGLIFRLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXX 363
+GL+ +L +G P L+ I+++FL++R F + ++S+ R L AGVPQG
Sbjct: 568 DGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNI 627
Query: 364 XXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKST 543
+DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP K+
Sbjct: 628 FTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTN 687
Query: 544 AVLF 555
A+ F
Sbjct: 688 AIFF 691
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 109 bits (261), Expect = 4e-24
Identities = 60/181 (33%), Positives = 87/181 (48%), Gaps = 8/181 (4%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR H +Q+HR+ L + + Y F D+ +AFD+VWH GL+++ +
Sbjct: 550 QFGFRLQHGTPEQLHRVVNFALEAMENKE--YAVGAFLDIQQAFDRVWHPGLLYKAKRL- 606
Query: 217 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 396
P L L+++ FL R+F V+G +SS +P+ AGVPQG +D+P P
Sbjct: 607 FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPV 666
Query: 397 H--------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 552
+A +ADDT V S++ LQ A QW W + IN K V
Sbjct: 667 TEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVT 726
Query: 553 F 555
F
Sbjct: 727 F 727
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 109 bits (261), Expect = 4e-24
Identities = 60/181 (33%), Positives = 87/181 (48%), Gaps = 8/181 (4%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR H +Q+HR+ L + + Y F D+ +AFD+VWH GL+++ +
Sbjct: 352 QFGFRLQHGTPEQLHRVVNFALEAMENKE--YAVGAFLDIQQAFDRVWHPGLLYKAKRL- 408
Query: 217 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 396
P L L+++ FL R+F V+G +SS +P+ AGVPQG +D+P P
Sbjct: 409 FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPV 468
Query: 397 H--------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 552
+A +ADDT V S++ LQ A QW W + IN K V
Sbjct: 469 TEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVT 528
Query: 553 F 555
F
Sbjct: 529 F 529
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 107 bits (257), Expect = 1e-23
Identities = 58/178 (32%), Positives = 92/178 (51%)
Frame = +1
Query: 22 ILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFR 201
I+ QFGFR +H ++QV+R+T I + Y A+F DV++AFDKVW +GL+F+
Sbjct: 541 IIPAHQFGFRESHGTIEQVNRITTEIRTAFEYRE--YCTAVFLDVSQAFDKVWLDGLMFK 598
Query: 202 LFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP 381
+ + +P+S +++ +L +R F R S+ + AGVPQG DIP
Sbjct: 599 I-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIP 657
Query: 382 RSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 555
+ ++ FADDT + SR+ +L + + +W WRI +N K V F
Sbjct: 658 TNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTF 715
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 106 bits (254), Expect = 3e-23
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 9/182 (4%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ +L +
Sbjct: 593 QFGFRKEHGSEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 217 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 381
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYI 709
Query: 382 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 549
R PT L+ +ADDT V S + + ++ + W KW I +N AK+ V
Sbjct: 710 YRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGHV 769
Query: 550 LF 555
+F
Sbjct: 770 IF 771
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 105 bits (253), Expect = 4e-23
Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ +L +
Sbjct: 605 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 661
Query: 217 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 381
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 662 LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYI 721
Query: 382 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 549
R PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 722 YRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 781
Query: 550 LF 555
+F
Sbjct: 782 IF 783
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 101 bits (243), Expect = 7e-22
Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 9/182 (4%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ +L +
Sbjct: 477 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 533
Query: 217 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 381
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 534 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 593
Query: 382 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 549
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 594 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 653
Query: 550 LF 555
++
Sbjct: 654 IY 655
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 101 bits (243), Expect = 7e-22
Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 9/182 (4%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ +L +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 217 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 381
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 382 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 549
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 769
Query: 550 LF 555
++
Sbjct: 770 IY 771
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 101 bits (243), Expect = 7e-22
Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 9/182 (4%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ +L +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 217 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 381
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 382 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 549
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 769
Query: 550 LF 555
++
Sbjct: 770 IY 771
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 101 bits (243), Expect = 7e-22
Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 9/182 (4%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ +L +
Sbjct: 555 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 611
Query: 217 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 381
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 612 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 671
Query: 382 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 549
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 672 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 731
Query: 550 LF 555
++
Sbjct: 732 IY 733
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 101 bits (243), Expect = 7e-22
Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 9/182 (4%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ +L +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 217 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 381
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 382 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 549
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 769
Query: 550 LF 555
++
Sbjct: 770 IY 771
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 100 bits (240), Expect = 2e-21
Identities = 56/173 (32%), Positives = 84/173 (48%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR H ++QV+R+T I + Y A+F DVA+AFD+VW +GL+F++ +
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHRE--YCTAIFLDVAQAFDRVWLDGLLFKIIKL- 600
Query: 217 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 396
+P + +++ +L NR F R + + S + AGVPQG D P
Sbjct: 601 LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNL 660
Query: 397 HLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 555
+ FADDT + S+ L ++ +W WRI IN K V F
Sbjct: 661 TTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF 713
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 98.3 bits (234), Expect = 8e-21
Identities = 55/173 (31%), Positives = 83/173 (47%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR H ++QV+R+T I + Y A+F DVA+AFD+VW +GL+F++ +
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHRE--YCTAIFLDVAQAFDRVWLDGLLFKIIKL- 600
Query: 217 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 396
+P + +++ +L N F R + + S + AGVPQG D P
Sbjct: 601 LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNL 660
Query: 397 HLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 555
+ FADDT + S+ L ++ +W WRI IN K V F
Sbjct: 661 TTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF 713
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 94.7 bits (225), Expect = 1e-19
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR +H Q+ R+T+ IL + A F D+ +AFD+VWH+GL+++L +
Sbjct: 149 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 205
Query: 217 VPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 381
+P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 206 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 265
Query: 382 -------RSPPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 525
P H LA +ADDT + S+ L Q+ +W +KW I I
Sbjct: 266 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 325
Query: 526 NPAKSTAVLF 555
N K+ +LF
Sbjct: 326 NAKKTGHILF 335
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 94.7 bits (225), Expect = 1e-19
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR +H Q+ R+T+ IL + A F D+ +AFD+VWH+GL+++L +
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 652
Query: 217 VPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 381
+P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 712
Query: 382 -------RSPPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 525
P H LA +ADDT + S+ L Q+ +W +KW I I
Sbjct: 713 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 772
Query: 526 NPAKSTAVLF 555
N K+ +LF
Sbjct: 773 NAKKTGHILF 782
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 94.7 bits (225), Expect = 1e-19
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR +H Q+ R+T+ IL + A F D+ +AFD+VWH+GL+++L +
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 652
Query: 217 VPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 381
+P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 712
Query: 382 -------RSPPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 525
P H LA +ADDT + S+ L Q+ +W +KW I I
Sbjct: 713 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 772
Query: 526 NPAKSTAVLF 555
N K+ +LF
Sbjct: 773 NAKKTGHILF 782
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 94.7 bits (225), Expect = 1e-19
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QFGFR +H Q+ R+T+ IL + A F D+ +AFD+VWH+GL+++L +
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 652
Query: 217 VPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 381
+P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 712
Query: 382 -------RSPPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 525
P H LA +ADDT + S+ L Q+ +W +KW I I
Sbjct: 713 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 772
Query: 526 NPAKSTAVLF 555
N K+ +LF
Sbjct: 773 NAKKTGHILF 782
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 87.8 bits (208), Expect = 1e-17
Identities = 47/136 (34%), Positives = 71/136 (52%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNMG 216
QF F H ++QV+R+T I + Y ALF DVA+AFD+VW +GL+F++ +
Sbjct: 85 QFDFPAKHGAIEQVNRITTEIRTAFEHRE--YCTALFLDVAQAFDRVWLDGLMFKIIQL- 141
Query: 217 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 396
+P ++ +++ +L R F R + SS + AGVPQG DIP +
Sbjct: 142 LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQL 201
Query: 397 HLALFADDTTVYYSSR 444
+ FADDT + SR
Sbjct: 202 TIFTFADDTAIISRSR 217
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 70.5 bits (165), Expect = 2e-12
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 4/170 (2%)
Frame = +1
Query: 4 FVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWH 183
F+ ++ Q F++NHS + + R+ L+ + L D +AFD+V
Sbjct: 537 FIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNALSTKN--HVSILATDFERAFDRVGI 594
Query: 184 NGLIFRLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXX 363
+ ++ RL G+ L +I+ F++NRSFR R+ S+ L G+PQG
Sbjct: 595 HAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMI 654
Query: 364 XXNDI----PRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQW 501
DI R +++L+ADD ++ +N + + +K + W
Sbjct: 655 AIEDINDIVTRHKDIYISLYADDAIIFTKIKNINTVREKFLEILQEINSW 704
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 52.4 bits (120), Expect = 5e-07
Identities = 33/109 (30%), Positives = 57/109 (52%)
Frame = +1
Query: 7 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHN 186
V+ ++ D+QFGF+ S + L L+ ++ ++T + D ++AFD+V +
Sbjct: 533 VTYNNLINDKQFGFKKGKSTSDCL--LYVDYLITKSK---MHTSLVTLDFSRAFDRVGVH 587
Query: 187 GLIFRLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 333
+I +L ++ I++F+SNR RV SSP PL G+PQG
Sbjct: 588 SIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQG 636
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 44.0 bits (99), Expect = 2e-04
Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 9/182 (4%)
Frame = +1
Query: 34 EQFGFRTNHSCVQQVHRLTEHILVGLNRPKPL-----YTGALFFDVAKAFDKVWHNGLIF 198
+Q+GFR S + + +T+ L+ + L Y + DV AF+ ++
Sbjct: 513 QQYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILG 572
Query: 199 RLFNMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXN- 372
+ N+GVPD + +I ++ +R Y E G RS ++AGVPQG +
Sbjct: 573 AMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRS--HQVSAGVPQGSVLGPILWNIMYDG 630
Query: 373 --DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTA 546
I + L FADD + ++ + A A +W K + I K+
Sbjct: 631 ILSISKPRGVELHCFADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEV 690
Query: 547 VL 552
VL
Sbjct: 691 VL 692
>AY069347-1|AAL39492.1| 396|Drosophila melanogaster LD05576p
protein.
Length = 396
Score = 32.3 bits (70), Expect = 0.60
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -2
Query: 287 PSTRYRKERFDKKSRMMSTRLSGTPMLNSLKIKPLCQTLSNAFATSKKRAPVYNGFGRLS 108
P RY K F + R+ +L+ TPM+ S I + N F+T P+ F
Sbjct: 29 PMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQNEFSTGADDQPLIAQFAAKD 88
Query: 107 PT 102
PT
Sbjct: 89 PT 90
>AE014134-3030|AAF53752.1| 396|Drosophila melanogaster CG10495-PA
protein.
Length = 396
Score = 32.3 bits (70), Expect = 0.60
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -2
Query: 287 PSTRYRKERFDKKSRMMSTRLSGTPMLNSLKIKPLCQTLSNAFATSKKRAPVYNGFGRLS 108
P RY K F + R+ +L+ TPM+ S I + N F+T P+ F
Sbjct: 29 PMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQNEFSTGADDQPLIAQFAAKD 88
Query: 107 PT 102
PT
Sbjct: 89 PT 90
>AY052073-1|AAK93497.1| 860|Drosophila melanogaster SD02969p
protein.
Length = 860
Score = 26.6 bits (56), Expect(2) = 3.8
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -2
Query: 353 RRGERTEPCGTPA-VRGRGEERVPSTRYRK-ERFDKKSRMMSTRLSGTPMLNSLKIKPLC 180
R+GE+ G P+ R + V +T K ++ +K +++ LSG L K+KPL
Sbjct: 468 RKGEQIANSGVPSHSRTKIVVSVDATLAHKLKQMEKSAKIDEDTLSGLKELEIGKLKPLP 527
Query: 179 QTLSNAFATSKK 144
+ N T ++
Sbjct: 528 SSSKNPVLTHRR 539
Score = 21.4 bits (43), Expect(2) = 3.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 53 VRNPNCSSIRMPLDETK 3
+R P+CSS D+TK
Sbjct: 545 IRTPSCSSSEASDDDTK 561
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,365,238
Number of Sequences: 53049
Number of extensions: 684240
Number of successful extensions: 2115
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2078
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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