Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1557
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 63 1e-10
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 47 1e-05
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 44 1e-04
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 44 1e-04
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 36 0.025
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 31 0.95
Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 30 1.3
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 30 1.3
AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical ... 29 2.2
AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical ... 29 2.9
AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical ... 29 2.9
Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical pr... 28 5.1
AC024791-24|AAF60656.1| 627|Caenorhabditis elegans Hypothetical... 28 5.1
Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 27 8.9
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 27 8.9
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 80.2 bits (189), Expect = 1e-15
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Frame = +1
Query: 142 LFFDVAKAFDKVWHNGLIFRLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAG 321
++ D +KAFD++ H+ L+ +L ++ +L++ + +FLSNRSFR R+ T SS + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 322 VPQGXXXXXXXXXXXXNDIPRSPPTHLAL--FADDTTVYYSSRNKSLIAKKLQSAALALG 495
VPQG NDI P +A FADDT + Y+S K+ LQSA A+
Sbjct: 77 VPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKL-YASTPKTESENNLQSALDAVV 135
Query: 496 QWFRKWRIDINPAKSTAV 549
W + ++ +N +K+ V
Sbjct: 136 DWTKGSKLTLNQSKTVHV 153
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 63.3 bits (147), Expect = 1e-10
Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 2/175 (1%)
Frame = +1
Query: 37 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALF-FDVAKAFDKVWHNGLIFRLFN- 210
Q GF+ HS V ++T I+ GLN P + D+ AFDKV L L
Sbjct: 436 QHGFKPEHSTTTAVIQVTNDIIGGLNMKNPPERAIMACLDLRAAFDKVPTKKLCNDLMEA 495
Query: 211 MGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP 390
G+ + L + ++L R R + S L GVPQG D+P
Sbjct: 496 QGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQ 555
Query: 391 PTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 555
T L +ADD ++ + A+K+Q + ++ ++ + I+ KST +F
Sbjct: 556 DTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKSTVTVF 610
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +1
Query: 160 KAFDKVWHNGLIFRLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGX 336
KAFD+V H+ L+ +L + G+ DFLS+R+F +V + P+++GVP+G
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 337 XXXXXXXXXXXNDIPRSPPTHL--ALFADDTTVYYSS 441
N + S P + + FADD VY S
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSISCSAFADDLKVYSHS 98
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/100 (30%), Positives = 45/100 (45%)
Frame = +1
Query: 34 EQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNM 213
EQ GFR + S + +H L + VG PL +F D KAFD V H + L
Sbjct: 655 EQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTL--VFIDFKKAFDSVEHQAIWKSLDEQ 712
Query: 214 GVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 333
G + + ++++ N + + R P+T GV QG
Sbjct: 713 GADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQG 751
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/100 (30%), Positives = 45/100 (45%)
Frame = +1
Query: 34 EQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNM 213
EQ GFR + S + +H L + VG PL +F D KAFD V H + L
Sbjct: 394 EQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTL--VFIDFKKAFDSVEHQAIWKSLDEQ 451
Query: 214 GVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 333
G + + ++++ N + + R P+T GV QG
Sbjct: 452 GADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQG 490
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/100 (30%), Positives = 45/100 (45%)
Frame = +1
Query: 34 EQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFRLFNM 213
EQ GFR + S + +H L + VG PL +F D KAFD V H + L
Sbjct: 484 EQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTL--VFIDFKKAFDTVEHQAIWKSLDEQ 541
Query: 214 GVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 333
G + + ++++ N + + R P+T GV QG
Sbjct: 542 GADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQG 580
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 35.9 bits (79), Expect = 0.025
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2
Query: 377 ISLTNKLNRRGERTEPCGTPAVRGRGEER 291
ISLTN GERT+PCGTP G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 142 LFFDVAKAFDKVWHNGLIFRLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAG 321
+F D KAFD V H + L G ++ + ++++ N + + R P+T G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 322 VPQG 333
V QG
Sbjct: 99 VRQG 102
>Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical
protein R10E12.1c protein.
Length = 846
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -2
Query: 407 KAKWVGGDRGIS-LTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMMST 231
K K GG I L ++L +R E T R EE+ RK+ K +RM S
Sbjct: 430 KLKQNGGSSEIMRLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSE 489
Query: 230 RLSGTPMLNSLKIKPLCQTLSNAFATSKKR 141
+L+G + K + + T SNA K++
Sbjct: 490 QLTGPLVTEIGKYRGILHTASNADKMVKEK 519
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -2
Query: 407 KAKWVGGDRGIS-LTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMMST 231
K K GG I L ++L +R E T R EE+ RK+ K +RM S
Sbjct: 430 KLKQNGGSSEIMRLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSE 489
Query: 230 RLSGTPMLNSLKIKPLCQTLSNAFATSKKR 141
+L+G + K + + T SNA K++
Sbjct: 490 QLTGPLVTEIGKYRGILHTASNADKMVKEK 519
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -2
Query: 407 KAKWVGGDRGIS-LTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMMST 231
K K GG I L ++L +R E T R EE+ RK+ K +RM S
Sbjct: 430 KLKQNGGSSEIMRLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSE 489
Query: 230 RLSGTPMLNSLKIKPLCQTLSNAFATSKKR 141
+L+G + K + + T SNA K++
Sbjct: 490 QLTGPLVTEIGKYRGILHTASNADKMVKEK 519
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -2
Query: 407 KAKWVGGDRGIS-LTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMMST 231
K K GG I L ++L +R E T R EE+ RK+ K +RM S
Sbjct: 430 KLKQNGGSSEIMRLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSE 489
Query: 230 RLSGTPMLNSLKIKPLCQTLSNAFATSKKR 141
+L+G + K + + T SNA K++
Sbjct: 490 QLTGPLVTEIGKYRGILHTASNADKMVKEK 519
>AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical
protein B0546.2 protein.
Length = 436
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 230 SCSSYGTSCRTALFDIESREPAPPHDLSQLESRKALSSHPSYLAYSSTIFP 382
SCSS +S +A I S+E PP L + S++ S + SS + P
Sbjct: 37 SCSSSASSSSSAAKRIRSQEDGPPSKRWVLSASSTSSTNKSPIPSSSPVLP 87
>AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical
protein F18A12.8b protein.
Length = 816
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 370 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPA 534
ND+P+ +L L D+ YY KS++ + + L + F K DI+PA
Sbjct: 585 NDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQ-KLTKPFDKHEFDISPA 638
>AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical
protein F18A12.8a protein.
Length = 848
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 370 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPA 534
ND+P+ +L L D+ YY KS++ + + L + F K DI+PA
Sbjct: 585 NDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQ-KLTKPFDKHEFDISPA 638
>Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical
protein R05D11.8 protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Frame = +3
Query: 450 VPNREEASERSPSP-RTVVPKMAHRHQPSEKYCGAISEGK---LHTDFLPD*EEESHTPR 617
V ++ A RSP T V K+ H K A + + +H F EE S TP
Sbjct: 123 VSPQKSAKGRSPKKFATNVEKLFEHHSTPSKLTLAKKQSRQSPMHNGFSHTAEEISATPH 182
Query: 618 LLSLDNPYPGP 650
S D P P
Sbjct: 183 FQSFDRQVPNP 193
>AC024791-24|AAF60656.1| 627|Caenorhabditis elegans Hypothetical
protein Y47G6A.4 protein.
Length = 627
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 453 PNREEASERSPSPRTVVPKMAHRHQPSEKYCGAISEGKLHTDF-LPD*EEESHTPRLLSL 629
PN ++ S P+PR + P+ A R PS+ A SE K + F D E+ TP + +
Sbjct: 540 PNVQQESVVVPAPRRLSPQRAPR--PSQNSPNAYSERKSFSAFPSEDPSEDYETPIISHI 597
Query: 630 DN 635
N
Sbjct: 598 MN 599
>Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical
protein F28B1.3 protein.
Length = 802
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 211 MGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLT 315
+ +PD ++I R+ R V GT+SSP PLT
Sbjct: 405 LDLPDHYLMIFREEAHPIFMRRFVNGTQSSPIPLT 439
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 227 VSCSSYGTSCRTALFDIESREPAPPHDLSQLESRKALSSHPSYLAYSS 370
+S +S T I+ P PPH S SR PS Y+S
Sbjct: 1 MSTASDSAETTTTTSSIDHLPPHPPHPTSHHNSRGGRGGRPSMKPYTS 48
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 227 VSCSSYGTSCRTALFDIESREPAPPHDLSQLESRKALSSHPSYLAYSS 370
+S +S T I+ P PPH S SR PS Y+S
Sbjct: 505 MSTASDSAETTTTTSSIDHLPPHPPHPTSHHNSRGGRGGRPSMKPYTS 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,523,327
Number of Sequences: 27780
Number of extensions: 334099
Number of successful extensions: 940
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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