Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1554
(792 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 32 2.7
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 32 2.7
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 32 2.7
AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein pr... 32 2.7
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 32 2.7
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 32 2.7
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 32 2.7
AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. 32 2.7
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 32 2.7
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 32 2.7
BC057819-1|AAH57819.1| 156|Homo sapiens chromosome 1 open readi... 31 3.6
AL929472-10|CAH70085.1| 156|Homo sapiens chromosome 1 open read... 31 3.6
AK127381-1|BAC86950.1| 156|Homo sapiens protein ( Homo sapiens ... 31 3.6
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 31 4.8
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 31 4.8
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 31 4.8
AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein. 31 4.8
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 31 4.8
X60655-1|CAA43062.1| 407|Homo sapiens EVX1 protein. 30 8.3
U68782-1|AAB07598.1| 407|Homo sapiens EVX1 protein. 30 8.3
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 306 GPVQRSMARPAPPQ*GRSGQ-IEINTMS-----IIACTPPRRTACALHPPGNAFSTTLPP 145
GP R + RP PP G GQ +E+ T+ + PPR+ A PP S LPP
Sbjct: 775 GPAPRVLVRPPPP--GCPGQAVEVTTLEELLRYLHGPQPPRKGA---EPPAPLTSRALPP 829
Query: 144 AP 139
P
Sbjct: 830 EP 831
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 306 GPVQRSMARPAPPQ*GRSGQ-IEINTMS-----IIACTPPRRTACALHPPGNAFSTTLPP 145
GP R + RP PP G GQ +E+ T+ + PPR+ A PP S LPP
Sbjct: 743 GPAPRVLVRPPPP--GCPGQAVEVTTLEELLRYLHGPQPPRKGA---EPPAPLTSRALPP 797
Query: 144 AP 139
P
Sbjct: 798 EP 799
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 306 GPVQRSMARPAPPQ*GRSGQ-IEINTMS-----IIACTPPRRTACALHPPGNAFSTTLPP 145
GP R + RP PP G GQ +E+ T+ + PPR+ A PP S LPP
Sbjct: 735 GPAPRVLVRPPPP--GCPGQAVEVTTLEELLRYLHGPQPPRKGA---EPPAPLTSRALPP 789
Query: 144 AP 139
P
Sbjct: 790 EP 791
>AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein
protein.
Length = 294
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 306 GPVQRSMARPAPPQ*GRSGQ-IEINTMS-----IIACTPPRRTACALHPPGNAFSTTLPP 145
GP R + RP PP G GQ +E+ T+ + PPR+ A PP S LPP
Sbjct: 107 GPAPRVLVRPPPP--GCPGQAVEVTTLEELLRYLHGPQPPRKGA---EPPAPLTSRALPP 161
Query: 144 AP 139
P
Sbjct: 162 EP 163
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 306 GPVQRSMARPAPPQ*GRSGQ-IEINTMS-----IIACTPPRRTACALHPPGNAFSTTLPP 145
GP R + RP PP G GQ +E+ T+ + PPR+ A PP S LPP
Sbjct: 775 GPAPRVLVRPPPP--GCPGQAVEVTTLEELLRYLHGPQPPRKGA---EPPAPLTSRALPP 829
Query: 144 AP 139
P
Sbjct: 830 EP 831
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 306 GPVQRSMARPAPPQ*GRSGQ-IEINTMS-----IIACTPPRRTACALHPPGNAFSTTLPP 145
GP R + RP PP G GQ +E+ T+ + PPR+ A PP S LPP
Sbjct: 735 GPAPRVLVRPPPP--GCPGQAVEVTTLEELLRYLHGPQPPRKGA---EPPAPLTSRALPP 789
Query: 144 AP 139
P
Sbjct: 790 EP 791
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 306 GPVQRSMARPAPPQ*GRSGQ-IEINTMS-----IIACTPPRRTACALHPPGNAFSTTLPP 145
GP R + RP PP G GQ +E+ T+ + PPR+ A PP S LPP
Sbjct: 743 GPAPRVLVRPPPP--GCPGQAVEVTTLEELLRYLHGPQPPRKGA---EPPAPLTSRALPP 797
Query: 144 AP 139
P
Sbjct: 798 EP 799
>AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein.
Length = 446
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 306 GPVQRSMARPAPPQ*GRSGQ-IEINTMS-----IIACTPPRRTACALHPPGNAFSTTLPP 145
GP R + RP PP G GQ +E+ T+ + PPR+ A PP S LPP
Sbjct: 259 GPAPRVLVRPPPP--GCPGQAVEVTTLEELLRYLHGPQPPRKGA---EPPAPLTSRALPP 313
Query: 144 AP 139
P
Sbjct: 314 EP 315
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 306 GPVQRSMARPAPPQ*GRSGQ-IEINTMS-----IIACTPPRRTACALHPPGNAFSTTLPP 145
GP R + RP PP G GQ +E+ T+ + PPR+ A PP S LPP
Sbjct: 748 GPAPRVLVRPPPP--GCPGQAVEVTTLEELLRYLHGPQPPRKGA---EPPAPLTSRALPP 802
Query: 144 AP 139
P
Sbjct: 803 EP 804
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 306 GPVQRSMARPAPPQ*GRSGQ-IEINTMS-----IIACTPPRRTACALHPPGNAFSTTLPP 145
GP R + RP PP G GQ +E+ T+ + PPR+ A PP S LPP
Sbjct: 743 GPAPRVLVRPPPP--GCPGQAVEVTTLEELLRYLHGPQPPRKGA---EPPAPLTSRALPP 797
Query: 144 AP 139
P
Sbjct: 798 EP 799
>BC057819-1|AAH57819.1| 156|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 156
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 113 GLESSPREKGAGGR--VVENAFPGGCKAQAVRRGGVHA 220
G PRE GAG R A PGG + A RGG A
Sbjct: 12 GCRRGPREGGAGARREATPTAAPGGARQAAAGRGGAAA 49
>AL929472-10|CAH70085.1| 156|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 156
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 113 GLESSPREKGAGGR--VVENAFPGGCKAQAVRRGGVHA 220
G PRE GAG R A PGG + A RGG A
Sbjct: 12 GCRRGPREGGAGARREATPTAAPGGARPAAAGRGGAAA 49
>AK127381-1|BAC86950.1| 156|Homo sapiens protein ( Homo sapiens
cDNA FLJ45459 fis, clone BRSTN2010416. ).
Length = 156
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 113 GLESSPREKGAGGR--VVENAFPGGCKAQAVRRGGVHA 220
G PRE GAG R A PGG + A RGG A
Sbjct: 12 GCRRGPREGGAGARREATPTAAPGGARPAAAGRGGAAA 49
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 354 IPSEARGVQIARG**KGPVQRSMARPAPPQ*GRS--GQIEINTMSIIACTPPRRTACALH 181
+P+ A+ + +A G GP Q PAPP S G +T+++ P ++ +L
Sbjct: 1725 VPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTL----APASSSASLL 1780
Query: 180 PPGNAFSTTLPPAP 139
P + + TL PAP
Sbjct: 1781 APASVQTLTLSPAP 1794
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 354 IPSEARGVQIARG**KGPVQRSMARPAPPQ*GRS--GQIEINTMSIIACTPPRRTACALH 181
+P+ A+ + +A G GP Q PAPP S G +T+++ P ++ +L
Sbjct: 374 VPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTL----APASSSASLL 429
Query: 180 PPGNAFSTTLPPAP 139
P + + TL PAP
Sbjct: 430 APASVQTLTLSPAP 443
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 354 IPSEARGVQIARG**KGPVQRSMARPAPPQ*GRS--GQIEINTMSIIACTPPRRTACALH 181
+P+ A+ + +A G GP Q PAPP S G +T+++ P ++ +L
Sbjct: 1466 VPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTL----APASSSASLL 1521
Query: 180 PPGNAFSTTLPPAP 139
P + + TL PAP
Sbjct: 1522 APASVQTLTLSPAP 1535
>AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein.
Length = 1104
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 222 IACTPPRRTACA-LHPPGNAFSTTLPPAPFSRGDDSRP 112
+ACT R TA + PP A STTLP P +RG P
Sbjct: 18 LACT--RHTAMPRMAPPNPATSTTLPSLPIARGPSGVP 53
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 354 IPSEARGVQIARG**KGPVQRSMARPAPPQ*GRS--GQIEINTMSIIACTPPRRTACALH 181
+P+ A+ + +A G GP Q PAPP S G +T+++ P ++ +L
Sbjct: 1548 VPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTL----APASSSASLL 1603
Query: 180 PPGNAFSTTLPPAP 139
P + + TL PAP
Sbjct: 1604 APASVQTLTLSPAP 1617
>X60655-1|CAA43062.1| 407|Homo sapiens EVX1 protein.
Length = 407
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 23 RVSGNRSMRAVHPIPDITETSRPRPSVSPLGLESSPREKGAGG 151
RVS N S P+P+ E PR +SP + + RE+G GG
Sbjct: 23 RVS-NLSEAVGSPLPEPPEKMVPRGCLSPRAVPPATRERGGGG 64
>U68782-1|AAB07598.1| 407|Homo sapiens EVX1 protein.
Length = 407
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 23 RVSGNRSMRAVHPIPDITETSRPRPSVSPLGLESSPREKGAGG 151
RVS N S P+P+ E PR +SP + + RE+G GG
Sbjct: 23 RVS-NLSEAVGSPLPEPPEKMVPRGCLSPRAVPPATRERGGGG 64
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,330,394
Number of Sequences: 237096
Number of extensions: 2136659
Number of successful extensions: 6173
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6172
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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