Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1554
         (792 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058490-1|AAL13719.1|  317|Drosophila melanogaster GM14344p pro...    31   1.4  
AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA...    31   1.4  
AE014296-2042|ABI31250.1|  317|Drosophila melanogaster CG11597-P...    31   1.4  
AE014296-2041|AAF50003.2|  317|Drosophila melanogaster CG11597-P...    31   1.4  

>AY058490-1|AAL13719.1|  317|Drosophila melanogaster GM14344p
           protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
 Frame = +2

Query: 14  ERSRVSGNRSMRAVHPIPD---ITETSRPRPSVSPLGLESSPREKGA--GGRVVE----- 163
           +  R+   RS+   H IP+   I +     P  +P G  +SPR  G   GG VVE     
Sbjct: 178 DMQRLDDLRSLDRCHEIPESGIIADLLWSDPQEAP-GWAASPRGHGKLFGGDVVEEFTRA 236

Query: 164 NAFPGGCKAQAVRRGGVHAMMDIVLISIWPLLPYCGGAG 280
           N     C+A  + + G       +L++IW    YC   G
Sbjct: 237 NGISLICRAHQLAQDGFRWHFGQLLVTIWSAPNYCYRCG 275


>AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA
           protein.
          Length = 950

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = -1

Query: 303 PVQRSMARPAPPQ*GRSGQIEINTMSIIACTPPRRTACALHPPGNAFSTTLPPAPFSRGD 124
           P  +S   PAPP     G     + S  A  PP  +  A  PP +++    PP+P S G 
Sbjct: 338 PPSKSYGAPAPPS-SSYGAPAAPSKSYGAPAPPSSSYGAPAPPSSSYGAPAPPSP-SYGA 395

Query: 123 DSRPS 109
            + PS
Sbjct: 396 PAPPS 400


>AE014296-2042|ABI31250.1|  317|Drosophila melanogaster CG11597-PB,
           isoform B protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
 Frame = +2

Query: 14  ERSRVSGNRSMRAVHPIPD---ITETSRPRPSVSPLGLESSPREKGA--GGRVVE----- 163
           +  R+   RS+   H IP+   I +     P  +P G  +SPR  G   GG VVE     
Sbjct: 178 DMQRLDDLRSLDRCHEIPESGIIADLLWSDPQEAP-GWAASPRGHGKLFGGDVVEEFTRA 236

Query: 164 NAFPGGCKAQAVRRGGVHAMMDIVLISIWPLLPYCGGAG 280
           N     C+A  + + G       +L++IW    YC   G
Sbjct: 237 NGISLICRAHQLAQDGFRWHFGQLLVTIWSAPNYCYRCG 275


>AE014296-2041|AAF50003.2|  317|Drosophila melanogaster CG11597-PA,
           isoform A protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
 Frame = +2

Query: 14  ERSRVSGNRSMRAVHPIPD---ITETSRPRPSVSPLGLESSPREKGA--GGRVVE----- 163
           +  R+   RS+   H IP+   I +     P  +P G  +SPR  G   GG VVE     
Sbjct: 178 DMQRLDDLRSLDRCHEIPESGIIADLLWSDPQEAP-GWAASPRGHGKLFGGDVVEEFTRA 236

Query: 164 NAFPGGCKAQAVRRGGVHAMMDIVLISIWPLLPYCGGAG 280
           N     C+A  + + G       +L++IW    YC   G
Sbjct: 237 NGISLICRAHQLAQDGFRWHFGQLLVTIWSAPNYCYRCG 275


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,897,461
Number of Sequences: 53049
Number of extensions: 680670
Number of successful extensions: 1930
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1925
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)