Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1548
(708 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0820 + 23437811-23440230,23440336-23440534 95 4e-20
03_02_0662 - 10250235-10250433,10250692-10253105 93 1e-19
05_03_0648 + 16563147-16565557,16565655-16565850 92 5e-19
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 43 2e-04
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568... 32 0.39
03_02_0441 - 8517501-8517701,8518004-8518139,8519995-8520107,852... 32 0.51
04_04_1122 + 31052497-31052629,31053133-31053191,31053285-310535... 29 2.7
08_02_1605 - 28166338-28166418,28166496-28166567,28166655-281667... 29 4.8
01_05_0681 - 24242485-24242560,24242721-24242785,24242874-242430... 29 4.8
12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387... 28 6.3
08_02_0114 + 12754155-12754370,12754792-12755340,12755410-127555... 28 8.4
03_06_0522 - 34494989-34495045,34495171-34495234,34495378-344954... 28 8.4
>12_02_0820 + 23437811-23440230,23440336-23440534
Length = 872
Score = 95.5 bits (227), Expect = 4e-20
Identities = 62/178 (34%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
Frame = +3
Query: 102 TLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGL 281
+L + Q+L SPD + A L N F+ LS+ L + +R AGL
Sbjct: 2 SLDITQVLLSAQSPDGATRKLAEESLKQFQEQNLPGFLFSLSNELANEEKPEESRRLAGL 61
Query: 282 QLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTE-NSRPSSAAQCVAYVAV 458
LKN L +K+ K + QRWLAL V+ IK +L + + S S+++Q +A VA
Sbjct: 62 ILKNALDAKEQHRKNELFQRWLALDVGVKAQIKGFLLQTLSSPVASARSTSSQVIAKVAG 121
Query: 459 AELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVL-TERSNQILT 629
E+P QW +LI L+ N+ VQ K+ATLE +GY+C+++ E + ++ N+ILT
Sbjct: 122 IEIPQKQWPELIASLLSNIHQVQPN--VKQATLETLGYLCEEVSPEAVDQDQVNKILT 177
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +1
Query: 604 QKEVIKFLPAIIHGMRSTEPSNHVRLAATQALLNS 708
Q +V K L A++ GM ++E ++ VRLAAT+AL N+
Sbjct: 169 QDQVNKILTAVVQGMNASEGNSDVRLAATRALYNA 203
>03_02_0662 - 10250235-10250433,10250692-10253105
Length = 870
Score = 93.5 bits (222), Expect = 1e-19
Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Frame = +3
Query: 105 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGLQ 284
+ + Q+L S D A L NF F++ LS L N +R AG+
Sbjct: 1 MDITQVLLAAQSHDGQLRTVAEENLKQFQQQNFPHFLQTLSVELSNDENPPESRRLAGIL 60
Query: 285 LKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTE--NSRPSSAAQCVAYVAV 458
LKN L +K+ T K+++ QRW+ + ++ +KE++L +G+ +R SS +Q +A VA
Sbjct: 61 LKNSLDAKESTRKEEFVQRWMNVDPAIKSQVKESLLITLGSPVFEARRSS-SQVIAKVAA 119
Query: 459 AELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVL-TERSNQILT 629
E+P W +LI L+ N+ + K+ATL+ +GY+C++I E L ++ N +LT
Sbjct: 120 IEIPHQGWPELIVNLLTNMTKPDAPPCLKQATLDCLGYVCEEISPEDLEQDQVNAVLT 177
>05_03_0648 + 16563147-16565557,16565655-16565850
Length = 868
Score = 91.9 bits (218), Expect = 5e-19
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Frame = +3
Query: 105 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGLQ 284
+ + QIL S D N A L N F+ LS L +R AG+
Sbjct: 1 MNITQILLSAQSADGNLRVVAEGNLKQFQEQNLPNFLLSLSVELSDNEKPPESRRLAGII 60
Query: 285 LKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTE-NSRPSSAAQCVAYVAVA 461
LKN L +KD K+ Q+W++L ++ IKE++L +G+ + +++Q +A VA
Sbjct: 61 LKNSLDAKDSAKKELLIQQWVSLDPSIKQKIKESLLITLGSSVHDARHTSSQVIAKVASI 120
Query: 462 ELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVL-TERSNQILT 629
E+P +W +LI L+ N+ + K+ATLEA+GY+C++I E L ++ N +LT
Sbjct: 121 EIPRREWQELIAKLLGNMTQQGAPAPLKQATLEALGYVCEEISPEHLEQDQVNAVLT 177
>04_04_1693 +
35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 43.2 bits (97), Expect = 2e-04
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 2/162 (1%)
Frame = +3
Query: 120 ILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQG-GNSQVARMAAGLQLKNH 296
+L+ +SP+ ++ + ++ +F ++ L L +G G S AR AAGL LKN+
Sbjct: 21 LLDAHISPNSDQARIWQQLQHYSQFPDFNNYLVFL---LARGEGKSFEARQAAGLLLKNN 77
Query: 297 LTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSAAQCVAYVAVAELPVG 476
L + ++ QQ Y+K +L IG N S V V + V
Sbjct: 78 LRATFSSMPPASQQ-----------YVKSELLPCIGATNKAIRSTVGTVISVLFQIVRVA 126
Query: 477 QWNDLIPILVENVVHVQSTEL-KKEATLEAIGYICQDIDAEV 599
W +L L + + S +L E ++AI IC+D+ E+
Sbjct: 127 GWIELFQALHQ---CLDSNDLDHMEGAMDAIYKICEDVPEEL 165
>01_06_1801 - 39954425-39954533,39955289-39955578,39955786-39956838,
39956998-39957263,39957345-39957420,39957525-39957605,
39957676-39957831,39958565-39958669,39958761-39959367,
39959514-39959585,39959802-39959953,39960063-39960240,
39960642-39960745,39960822-39960953,39961036-39961132,
39961280-39961407,39961533-39961592,39962799-39962918,
39963011-39963091,39963173-39963361,39963826-39964024,
39964177-39964257,39964398-39964588,39965226-39965382,
39965986-39966119,39966266-39966334,39966434-39966481,
39966572-39966646,39967112-39967192,39967399-39967461,
39967564-39967623,39967754-39967795,39968777-39968902,
39969027-39969176
Length = 1843
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Frame = +3
Query: 261 ARMAAGLQLKNHLTSKDPTLKQQ-----YQQRWLALAEDVRLYIKENILAAIGTENSRPS 425
A++ G Q + LT+KD +++ + +++ A+ D + K+N LAA G++N PS
Sbjct: 1267 AKIVPGNQSADPLTAKDQSVRAKSIEGRHERSEAAMKPDAQQ--KKNALAANGSDNQMPS 1324
Query: 426 SAAQ 437
S+AQ
Sbjct: 1325 SSAQ 1328
>03_02_0441 -
8517501-8517701,8518004-8518139,8519995-8520107,
8520189-8520284,8520376-8520590,8520675-8520797,
8520887-8520917,8521020-8521079,8521951-8522106,
8522185-8522274,8522347-8522562,8522671-8522805,
8522898-8523401,8523485-8523700,8524411-8524456,
8524542-8524678,8525059-8525191,8526084-8526358
Length = 960
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/66 (21%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 318 LKQQYQQRWLALAEDVRLYIKENILAAIGTENSR--PSSAAQCVAYVAVAELPVGQWNDL 491
L+++ W L + +K+ ++ +I ++S ++A V+ +A +P G+W +L
Sbjct: 60 LRKKITSHWPKLPPHAKASLKQALIDSITIDHSHLVRRASANVVSIIAKYAVPAGEWPEL 119
Query: 492 IPILVE 509
+P + +
Sbjct: 120 LPFIFQ 125
>04_04_1122 +
31052497-31052629,31053133-31053191,31053285-31053579,
31054099-31054279,31054739-31054956,31055522-31055739,
31055842-31055958,31056106-31056128,31056223-31056438,
31056536-31056677,31056822-31057067,31057659-31057856,
31058331-31058379,31060835-31060911,31061266-31061551,
31061661-31061841,31062149-31062344,31062630-31062738,
31062861-31062961,31063155-31063267,31063347-31063442,
31063531-31063746,31063857-31063995,31064087-31064332,
31064605-31064940
Length = 1396
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +3
Query: 345 LALAEDVRLYIKENILAAIGTENSRPSSAAQCVAYVAVAELPVGQWNDLIPILVENVVHV 524
L + + + + E + A IG + P + + E+P+GQ + VE V+H+
Sbjct: 165 LFIGRNFSIAMDEQLAAPIGFNITFPGMLSSVIEMGL--EVPIGQTD------VERVLHL 216
Query: 525 QSTELKKE 548
Q TELK+E
Sbjct: 217 QETELKRE 224
>08_02_1605 - 28166338-28166418,28166496-28166567,28166655-28166771,
28166846-28166956,28167077-28167252,28167340-28167421,
28167662-28167808,28167887-28168252,28168558-28168741,
28169104-28169213,28169452-28169508,28169589-28169600,
28169899-28169961,28170010-28170057,28170166-28170246,
28170326-28170389,28170661-28170686,28170782-28170868,
28170942-28170969,28171194-28171255,28171364-28171576,
28171667-28171774,28171948-28172022,28172136-28172249,
28172597-28172644,28172688-28172767,28172974-28173049,
28173287-28173427,28173685-28173762,28175100-28175204,
28177061-28177147,28177287-28178579
Length = 1463
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 474 GQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTGHH 638
G+ D++P+ + VH T +KKE L+ + D+ + V RS++ T +H
Sbjct: 1215 GEIMDMMPVADPDAVHAVRTFIKKELALQ----LKDDLLSTVTNNRSSEAYTFNH 1265
>01_05_0681 -
24242485-24242560,24242721-24242785,24242874-24243029,
24243073-24243121,24243291-24243366,24243456-24243666,
24244038-24244160,24244245-24244363,24244439-24244532,
24245123-24245233,24245336-24245392
Length = 378
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 18 RFLFFKKQD*VSLLQHKLKNSETMHAETTLTLIQILEKTVSPDRNELE 161
R+ K++ VS Q+ NS+ + T LTL++ +PD +ELE
Sbjct: 164 RYFCLAKREPVSF-QNPSDNSKLLRTPTFLTLVRAGHNRCNPDEDELE 210
>12_02_1200 +
26937624-26937674,26937913-26938005,26938582-26938728,
26940299-26940379,26940711-26940849,26940977-26941013,
26941095-26941202,26941434-26941533,26941638-26941783,
26941862-26941953,26942086-26942180,26942435-26942531,
26942623-26942766,26942912-26943129,26943213-26943323
Length = 552
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 63 HKLKNSETMHAETTLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDV 233
H +KN + H + + L T++ + L RYLD T + +K L DV
Sbjct: 456 HYMKNFDVGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLDRLGETKYLMALKNLCDV 512
>08_02_0114 +
12754155-12754370,12754792-12755340,12755410-12755512,
12755552-12756060
Length = 458
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +3
Query: 213 IKMLSDVLLQGGNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLAL 353
I+ + + ++GG +++A+ A+ + + T+ Q+Y WL L
Sbjct: 279 IENVKAITMRGGTNEIAKKASSSDSADKEDQPEKTVPQEYCDTWLLL 325
>03_06_0522 -
34494989-34495045,34495171-34495234,34495378-34495494,
34495878-34496032,34496221-34496319,34496464-34496593,
34496727-34496866,34497050-34497239,34497346-34497547,
34497589-34497631
Length = 398
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +3
Query: 123 LEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGLQLKNHLT 302
+E+ SP+ + AV+ D + F+K ++ +++ + VAR AA +L +
Sbjct: 30 IEEAKSPNTSVAAVAVKNADASVYKIIHGFLKQKNNSIIKVA-ANVARKAASNKLSRKTS 88
Query: 303 SKDPTLKQQYQQRW 344
+L Q+ Q +W
Sbjct: 89 DVFDSLIQKQQSKW 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,796,667
Number of Sequences: 37544
Number of extensions: 340438
Number of successful extensions: 971
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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