Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1546
(661 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 33 0.048
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.064
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 32 0.084
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 31 0.11
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 30 0.34
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.59
SPAC959.06c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.4
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 27 3.2
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 27 3.2
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 27 3.2
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 27 3.2
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 26 5.5
SPAP27G11.15 |slx1||structure-specific endonuclease catalytic su... 26 5.5
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 25 7.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 7.3
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 25 7.3
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 25 9.7
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 25 9.7
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 25 9.7
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 9.7
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 25 9.7
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 9.7
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 32.7 bits (71), Expect = 0.048
Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 5/149 (3%)
Frame = +3
Query: 135 PLKTASMKTTDNATSSSNVSMES-PQPSSARTVLCSTLL--SGRXXXXXXXXXXXXXIGL 305
P T+S TS+S+ S P P+++ + ST + +G
Sbjct: 253 PTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSS 312
Query: 306 NSSPPSPTHNVPAAMDSLPIP-TPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 482
S+PP P S P+P T T+ST+ TST ++ P
Sbjct: 313 TSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPP 372
Query: 483 PSEDKDV-TNNKKKQRTASSAPKSSWLMP 566
P+ T++ T++S S+ + P
Sbjct: 373 PASTSSTGTSSSPLLSTSTSCTTSTSIPP 401
Score = 25.0 bits (52), Expect = 9.7
Identities = 31/123 (25%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Frame = +3
Query: 120 PNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXI 299
P + + + T TS+S+ S+ P S++ T S L
Sbjct: 123 PTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTG 182
Query: 300 GLNS--SPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPAS 473
G +S +P +PT P + S IP P +TSST TSTS P S
Sbjct: 183 GSSSLSTPITPTVP-PTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCT-TSTSIPTGGS 240
Query: 474 GPI 482
+
Sbjct: 241 SSL 243
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Frame = +3
Query: 120 PNSSAPLKTAS------MKTTDNATSSSNVSMESPQPSSART 227
PN+S +KTAS +KT ++ SS+ S +P S++ T
Sbjct: 716 PNNSTEVKTASTSSGTEIKTASTSSGSSSSSSYTPASSTSTT 757
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 32.3 bits (70), Expect = 0.064
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 3/151 (1%)
Frame = +3
Query: 111 LQAPNSSAPLKTASMKTTDNATSSSNVSMESPQP-SSARTVLCSTLLSGRXXXXXXXXXX 287
+ + +SS A T+ + SSS+V S P SS+ + L S+ LS
Sbjct: 189 VSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSS 248
Query: 288 XXXIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVP 467
L+SS S T + ++ S+ + ++S T+ + TSTS+ +
Sbjct: 249 STSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTIS 308
Query: 468 ASGPIPSEDKDVTNNKKKQRTA--SSAPKSS 554
+S S ++ ++ SS+P SS
Sbjct: 309 SSSSSSSSFSSTLSSSSMSSSSSFSSSPTSS 339
Score = 31.9 bits (69), Expect = 0.084
Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 6/145 (4%)
Frame = +3
Query: 138 LKTASMKTTDNATSSSNVSMESPQPSSARTVLC---STLLSGRXXXXXXXXXXXXXIGLN 308
+ ++S+ ++D TSS+ S+ S SS +V ST S + +
Sbjct: 159 ISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSS 218
Query: 309 SSPPSPTHNVPAAMDSLP---IPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGP 479
SS PS + + SL IP+ ++SST++ + +S+S+ + +S
Sbjct: 219 SSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSS 278
Query: 480 IPSEDKDVTNNKKKQRTASSAPKSS 554
S ++ ++SS+P S+
Sbjct: 279 SSSSPTSTSSTISSSSSSSSSPTST 303
Score = 29.5 bits (63), Expect = 0.45
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Frame = +3
Query: 123 NSSAPLKTASMKTTDNATSSSNVSMES--PQPSSARTVLCSTLLSGRXXXXXXXXXXXXX 296
+SS+P T+S ++ +++SSS S S SS+ + STL S
Sbjct: 279 SSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSS-------- 330
Query: 297 IGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASG 476
+SSP S + + ++ S P + +T+S++ + TS+ST +S
Sbjct: 331 -SFSSSPTSSSSTISSSSSS-PSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSS 388
Query: 477 PI--PSEDKDVTNNKKKQRTASSAPKSS 554
P+ +++ +++SS+ SS
Sbjct: 389 SSSRPASSSSHSSSLSSHKSSSSSKSSS 416
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.9 bits (69), Expect = 0.084
Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 3/151 (1%)
Frame = +3
Query: 123 NSSAPLKTA-SMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXI 299
++S+P T+ S+ ++ +++ S+ S SP S+ ST+LS I
Sbjct: 583 STSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSSI 642
Query: 300 --GLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPAS 473
G +S S +P + + + +SST +S+S+P+P+S
Sbjct: 643 ISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPSS 702
Query: 474 GPIPSEDKDVTNNKKKQRTASSAPKSSWLMP 566
+ S +N + +A SS +P
Sbjct: 703 SSLVSTYSASLSNITHSSLSLTAMSSSSAIP 733
Score = 27.9 bits (59), Expect = 1.4
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +3
Query: 306 NSSPPSPTHNVP-AAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 482
+SS P + P ++ S P +TSS A STS+ P+S I
Sbjct: 472 SSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSSSII 531
Query: 483 PSEDKDVTNNKKKQRTASSAPKSS 554
S V ++ T+SS+ SS
Sbjct: 532 SSPMTSVLSSSSSIPTSSSSDFSS 555
Score = 25.0 bits (52), Expect = 9.7
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 105 LQLQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLS 251
L L A +SS+ + T+ +T SSSN + S SSA ++ ST +S
Sbjct: 721 LSLTAMSSSSAIPTSVNSSTLITASSSNTLLSSITSSSA--IVSSTTVS 767
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 31.5 bits (68), Expect = 0.11
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 123 NSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLS 251
+SS P+ TAS+ T+ + S+S + SP P+++ T S++LS
Sbjct: 94 SSSTPI-TASVPTSSSILSNSTIPTTSPVPTTSSTPTSSSILS 135
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.9 bits (64), Expect = 0.34
Identities = 31/144 (21%), Positives = 59/144 (40%)
Frame = +3
Query: 123 NSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXIG 302
+SS+P +++ TT ++SSS+ S S SS+ + S+ S
Sbjct: 140 SSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSS---SSSSSSSSSSSSSSSSSSSSSS 196
Query: 303 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 482
+SS S + +VP + + ++SS+++ S+ST +
Sbjct: 197 SSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVT 256
Query: 483 PSEDKDVTNNKKKQRTASSAPKSS 554
PS T+++ TA+ A +S
Sbjct: 257 PSSSSSSTSSEVPSSTAALALNAS 280
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.59
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 5/148 (3%)
Frame = +3
Query: 126 SSAPLKTASMKTT--DNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXI 299
+SA ++S+ +T N+ +SS+++ S +++ T S++ S
Sbjct: 204 TSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTA 263
Query: 300 GLNSSPPSPT--HNVPAAM-DSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPA 470
++S S + +N + + S P TPL + +STTA + ST+T +
Sbjct: 264 ATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTA---TSASSTPLTSVNSTTTTSAS 320
Query: 471 SGPIPSEDKDVTNNKKKQRTASSAPKSS 554
S P+ S + N + SS P SS
Sbjct: 321 STPLSSVS---SANSTTATSTSSTPLSS 345
Score = 27.9 bits (59), Expect = 1.4
Identities = 35/144 (24%), Positives = 64/144 (44%)
Frame = +3
Query: 123 NSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXIG 302
++SA +++ T+ N+T+S++VS +P +++ + S++ S
Sbjct: 380 STSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSS----TPLSSANSTTATS 435
Query: 303 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 482
+S+P S ++ A S TPL + +STTA + T+TS +S P+
Sbjct: 436 ASSTPLSSVNSTTATSAS---STPLSSVNSTTATSASSTPLTSVNSTTATSA---SSTPL 489
Query: 483 PSEDKDVTNNKKKQRTASSAPKSS 554
S N +ASS P +S
Sbjct: 490 TSV------NSTSATSASSTPLTS 507
Score = 25.4 bits (53), Expect = 7.3
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 9/153 (5%)
Frame = +3
Query: 123 NSSAPLKTASMKT---TDNATSSS---NVSMESPQPSSARTVLCS---TLLSGRXXXXXX 275
+SS PL +++ T + +ATSSS N S P + + T L S T +
Sbjct: 250 SSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLT 309
Query: 276 XXXXXXXIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTS 455
+S+P S + + + TPL + +STTA + T+TS
Sbjct: 310 SVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATS 369
Query: 456 TPVPASGPIPSEDKDVTNNKKKQRTASSAPKSS 554
+S P+ S N +ASS P +S
Sbjct: 370 A---SSTPLTSV------NSTSATSASSTPLTS 393
>SPAC959.06c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 225
Score = 27.1 bits (57), Expect = 2.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 344 GGDIVSWAWGAGVQSY 297
G I+SW+WG G +S+
Sbjct: 140 GSSILSWSWGLGFESF 155
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 26.6 bits (56), Expect = 3.2
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Frame = +3
Query: 120 PNSSAPLKTASMKTTDNATSSSNVSMESPQ--PSSARTVLCSTLLSGRXXXXXXXXXXXX 293
P SS PL+ S TT ++S++ + SPQ P + + ST S +
Sbjct: 13 PTSSIPLRQMSQPTTSAPSNSASSTPYSPQQVPLTHNSYPLSTPSSFQHGQTRLPPINCL 72
Query: 294 XIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTA 401
N P P H+ AA S +P AT ST A
Sbjct: 73 AEPFNR--PQPWHSNSAAPAS---SSPTSATLSTAA 103
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 134 PAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRK 256
P Y DD ++ E V G T +C ++FD TIR+
Sbjct: 488 PTYGNIYLDDFPLEEIDEHVLGSTITLVCQQPVIFDMTIRE 528
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 447 STSTPVPASGPIPSEDKDVTNNKKKQRTASSAPK 548
S+STP PAS P ++++K R+ +P+
Sbjct: 619 SSSTPTPASVLAPPSSASLSSSKDANRSVPESPR 652
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 444 TSTSTPVPASGPIPSEDKDVTNNKKKQRTASSAPKSS 554
TSTSTP A+ P P+ V K + +++ A +S
Sbjct: 77 TSTSTPKSAASPAPNPPASVPEKKVEAPSSTVAESTS 113
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 565 GINQLLFGALEAVLCFFLLFVTSLSSDGIGPDAG 464
GI +GA +L F F S+ G PDAG
Sbjct: 480 GIYGACYGAFIIILVFITEFYVSIFPIGASPDAG 513
>SPAP27G11.15 |slx1||structure-specific endonuclease catalytic
subunit |Schizosaccharomyces pombe|chr 1|||Manual
Length = 271
Score = 25.8 bits (54), Expect = 5.5
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 368 DPSVCNIFYNCIEGEATEVKC 430
+P CN+ Y CIE + C
Sbjct: 176 EPVKCNLCYECIESDELRANC 196
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 441 FTSTSTPVPASGPIPSEDKDVTNNKKKQR 527
FT + P+ + P PSE D N KQ+
Sbjct: 179 FTEWNVPLRETSPSPSETADSPNKLPKQK 207
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.4 bits (53), Expect = 7.3
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +3
Query: 312 SPPSPTHNVPAAMDSLPIPT 371
+PP+P +P A+ ++P+P+
Sbjct: 1477 APPAPVSQLPPAVPNVPVPS 1496
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = -2
Query: 249 IVGSNTRPSGQSLVVATPSTHSKNLSHCLSSSYWPSLAGHLNWALAIA 106
I+ + PS S +V + L C + + ++ GH NW +A
Sbjct: 137 IISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVA 184
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 444 TSTSTPVPASGPIPSEDKDVTNNKKKQRTASSAPKS--SWLMPK 569
T + P+P S + S ++ ++ K+ + S+PKS +W K
Sbjct: 983 TKVAHPIPVSNGLSSPPRERLDDNAKEILSRSSPKSPVAWFKRK 1026
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = +3
Query: 123 NSSAPLKTASMKTTDNATSSS--NVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXX 296
++S P A +T + + SS NV+ P ++++ + +S
Sbjct: 465 SASTPASGAVSRTPSSVSLSSLSNVNSSMPHKPASQSNVGPVRISSNRRSRKFSSSSRVS 524
Query: 297 IG--LNSSPPSPTHNVPAAMDSLPIPTP 374
+ L SPPSP+ + +A S TP
Sbjct: 525 VSNLLAGSPPSPSSSTKSASSSYSTTTP 552
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 9.7
Identities = 17/79 (21%), Positives = 30/79 (37%)
Frame = +3
Query: 312 SPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPSE 491
S P P+ +VPA D P P + ++ + +T P ++ P+P E
Sbjct: 441 SSPLPSASVPALGDGSPDPPAAPSIQNSLSVHESEMPPHVTRDYTQ---PAASATPVPKE 497
Query: 492 DKDVTNNKKKQRTASSAPK 548
+ K ++ S K
Sbjct: 498 KPSEKSEKPPKKKGSKLEK 516
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 165 DNATSSSNVSMESPQPSSARTV 230
D SSSNVS++S QP S V
Sbjct: 76 DAVASSSNVSLQSQQPLSKPVV 97
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 25.0 bits (52), Expect = 9.7
Identities = 25/104 (24%), Positives = 33/104 (31%), Gaps = 1/104 (0%)
Frame = +3
Query: 192 SMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXIGLNSSPP-SPTHNVPAAMDSLPIP 368
+ME PQ + V ST S R N++ P T P S P P
Sbjct: 834 NMEEPQHQDSSVVDVSTSASQRGSPVLSDLSKLTGSARNTAEPVENTSAEPIENTSAPTP 893
Query: 369 TPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPSEDKD 500
+ T A + STP P P+P +D
Sbjct: 894 FEIANKQQATEPISAPF------ATETISTPAPVKPPVPPSRRD 931
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 123 NSSAPLKTASMKTTDNATSSSNVSMESPQPSSART 227
+SS+ ++S ++ +++SSS+ S S PSS+++
Sbjct: 183 SSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKS 217
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,732,245
Number of Sequences: 5004
Number of extensions: 58175
Number of successful extensions: 295
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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