Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1546
(661 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0431 - 19000267-19000719 32 0.47
07_03_0690 - 20714691-20714922,20715498-20715572,20715914-207160... 31 0.81
01_06_1816 + 40086972-40087820,40088324-40088459,40088544-400886... 31 1.1
06_03_1146 - 28004896-28005554,28005664-28005844 30 1.4
05_03_0059 + 7900544-7900673,7900774-7901027,7901949-7902320 30 1.4
08_02_1012 + 23550314-23551504 30 1.9
05_03_0458 + 14280953-14281866,14281964-14282912 30 1.9
04_03_0191 - 12452369-12452499,12452875-12453077,12453641-124538... 30 1.9
08_01_0501 + 4345522-4345720,4346598-4347167,4347294-4347366,435... 29 2.5
07_03_1107 - 24024387-24024497,24025799-24026410 25 3.2
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 29 3.3
12_02_0766 - 22982606-22983288,22984352-22984706 29 3.3
09_02_0252 - 6315834-6315959,6316074-6317018 29 3.3
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 29 4.3
06_03_0336 + 19671500-19672150,19672681-19673301 29 4.3
03_06_0426 + 33855701-33856135 29 4.3
03_03_0145 + 14833043-14833113,14833544-14833662,14833834-148339... 29 4.3
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 29 4.3
11_04_0200 - 14766546-14766797,14766885-14767151 28 5.7
10_06_0145 + 11215895-11216860 28 5.7
02_03_0134 - 15596379-15597689 28 5.7
01_01_0242 + 1997427-1997429,1997893-1998580,2000199-2000234,200... 28 5.7
11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939... 28 7.6
09_06_0205 - 21567467-21567655,21567791-21567876,21567965-215680... 28 7.6
09_04_0308 + 16567361-16568854,16568946-16569068,16569372-165696... 28 7.6
07_03_1091 + 23899825-23900649,23900750-23900998,23901104-239011... 28 7.6
06_03_0548 + 22004338-22006746 28 7.6
06_01_0671 - 4899611-4899829,4900870-4901448 28 7.6
03_03_0094 + 14378953-14380728 28 7.6
01_06_0554 + 30179641-30179658,30179725-30180126,30180580-301808... 28 7.6
>12_02_0431 - 19000267-19000719
Length = 150
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Frame = -3
Query: 401 CSCRRCC----TQRGRDGQRIHCGGD--IVSWAWGAG 309
C C C +RG DG+ + CGGD +VS+ GAG
Sbjct: 96 CCCVSACGGRRRRRGSDGEEVCCGGDGPVVSYRGGAG 132
>07_03_0690 -
20714691-20714922,20715498-20715572,20715914-20716006,
20716177-20716209,20717521-20717710,20717992-20718061,
20718215-20718370,20718529-20718555
Length = 291
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 596 GTWGERRSVLGHQPAALWGTRSRPLFFFVVRYILVF 489
GT G + LG QPAA W R +FFF Y ++
Sbjct: 118 GTPGGKSRRLGRQPAAPWLDPRRVVFFFATLYRAIY 153
>01_06_1816 +
40086972-40087820,40088324-40088459,40088544-40088640,
40088742-40088842,40089149-40089312,40089407-40089595,
40089904-40090025,40090200-40090242
Length = 566
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/98 (27%), Positives = 42/98 (42%)
Frame = -1
Query: 640 TVQAYVKTLAVVGVGELGVSDDLSLGINQLLFGALEAVLCFFLLFVTSLSSDGIGPDAGT 461
T A + A V + ++D L++ LL A A + + VT+ + G
Sbjct: 422 TAMAAFQICAQVWLASSLLADGLAVAGQALLASAF-AKKDHYKVAVTTARVLQLAVVLGV 480
Query: 460 GVLVEVKAGGTLDLGGFTFDAVVEDVAHRGVGMGKESI 347
G+ + AG G FT DA V HRGV +G ++
Sbjct: 481 GLTAFLAAGMWFGAGVFTSDAAVISTIHRGVPVGVAAV 518
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 309 SSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPAS-GPIP 485
SSPPSP PAA P+P+ T S + T +S P PA+ P P
Sbjct: 162 SSPPSPA---PAAATPSLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAAMAPSP 218
Query: 486 S 488
S
Sbjct: 219 S 219
>05_03_0059 + 7900544-7900673,7900774-7901027,7901949-7902320
Length = 251
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -2
Query: 312 WSSVLSPQSTLKGWSHLLIFLIVGSNTRPSG 220
++++L P+S++ G+ LL LIVG+NT G
Sbjct: 160 YATILDPRSSVPGFGPLLTGLIVGANTIAGG 190
>08_02_1012 + 23550314-23551504
Length = 396
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
Frame = +3
Query: 306 NSSPPSPTHNVPAAMDSLPI---PTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASG 476
+SS SPT PAA+ P+ PL A S P PA+
Sbjct: 305 SSSSSSPTKQAPAALGFYPMGPYSLPLPAQGDAAEGNAAVGSGDGTVTAPSPPPPPPAAA 364
Query: 477 PIPSEDKDV-TNNKKKQRTASSAPK 548
P+P + K V +K+ R SS K
Sbjct: 365 PLPVKPKLVKLGARKRGRPKSSKNK 389
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 315 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVP 467
PPSPT + P+A P+PTP A+SS + F S+S+P P
Sbjct: 94 PPSPTTS-PSASSLPPVPTPRSASSSKCS---APTSAQTPTRFLSSSSPPP 140
>04_03_0191 -
12452369-12452499,12452875-12453077,12453641-12453835,
12454301-12454809
Length = 345
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 239 RTQDRPGRAWLWRLHRHIRRT 177
R Q RP R W+WRLH + R+
Sbjct: 39 RGQIRPLRGWIWRLHAGVSRS 59
>08_01_0501 +
4345522-4345720,4346598-4347167,4347294-4347366,
4351133-4353092,4353465-4353840,4353932-4354326,
4354597-4354765,4355444-4355518,4357699-4357826,
4357988-4358213,4358290-4358417,4358505-4358768
Length = 1520
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1
Query: 625 VKTLAVVGVGELGVSDDLSLGINQLL 548
VK L+VVG G LG++DD S QL+
Sbjct: 245 VKVLSVVGSGGLGITDDTSEDERQLI 270
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 24.6 bits (51), Expect(2) = 3.2
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3
Query: 114 QAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTV 230
+AP + AP K K+T + + +P P+S+ V
Sbjct: 76 EAPTTPAPTKAPPTKSTKAPAPAPKAAKATPPPASSPPV 114
Score = 23.0 bits (47), Expect(2) = 3.2
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +3
Query: 309 SSPPSPTHNVPAAMDSLP-IPTP 374
+SPPSP PA + + P P P
Sbjct: 119 ASPPSPAAEAPATIPTKPDAPAP 141
>12_02_0800 +
23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 438 AFTSTSTPVPASGPIPSEDKDVTNNKKKQRTASSAPKSSWL 560
A+ S+S P ASG +PS T N + R+A + P SS L
Sbjct: 105 AWGSSSRPSTASGTLPSNHLQTTTN--RPRSAETRPGSSQL 143
>12_02_0766 - 22982606-22983288,22984352-22984706
Length = 345
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/71 (32%), Positives = 27/71 (38%)
Frame = +3
Query: 342 AAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPSEDKDVTNNKKK 521
AA + P P PL A A T PVP S P P+ KDV +
Sbjct: 14 AAALTTPPPPPLPPARRLVAAAAGGDLSLAMSAATG-EYPVPVSPPYPAASKDVELRRAM 72
Query: 522 QRTASSAPKSS 554
+A SA SS
Sbjct: 73 TASARSAAYSS 83
>09_02_0252 - 6315834-6315959,6316074-6317018
Length = 356
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +3
Query: 336 VPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPSEDKDVTNNK 515
+PAA D P P PL T + S++TP GP+PS + T++
Sbjct: 1 MPAAADLPPPPPPLAIPLPETTRRPRRRTREVSSRYLSSTTP----GPVPSSPRLSTSSS 56
Query: 516 KKQRTASSAPKSS 554
+ + P+++
Sbjct: 57 RTPSPRAHRPRAA 69
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 315 PPSPTHNVPAAMDSLPIPTPLC 380
PP P H PAA+ LP+P P C
Sbjct: 4 PPPPPH--PAALLPLPLPLPFC 23
>06_03_0336 + 19671500-19672150,19672681-19673301
Length = 423
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 197 GVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGD 298
G A +C + +V T+R++ C F+VDC D
Sbjct: 144 GGALCAVCLEDVVAGETVRRLPSCGHLFHVDCID 177
>03_06_0426 + 33855701-33856135
Length = 144
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 617 VGSRWGGGTWGERRSVLGHQP 555
VG GGG W RR GH+P
Sbjct: 114 VGGSGGGGAWRRRRRSRGHRP 134
>03_03_0145 +
14833043-14833113,14833544-14833662,14833834-14833991,
14834147-14834587
Length = 262
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 465 PASGPIPSEDKDVTNNKKKQRTASSAPKSSW 557
PA P PSED++ NN + + SSW
Sbjct: 218 PAEDPEPSEDQEAPNNVARPQPRYPTEASSW 248
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 111 LQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCST 242
L A +S P +N +SSSN +M++ PS+ T + ST
Sbjct: 235 LDAAANSVPPGAGPSHNMENTSSSSNTAMQNGGPSTVVTPVIST 278
>11_04_0200 - 14766546-14766797,14766885-14767151
Length = 172
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 659 EGHGARHRSGIRKNVGSRWGGGTWGERRSVLG 564
+G G R + GI++ + + GG GE++ +G
Sbjct: 93 DGMGGRRKKGIKEKIKEKLPGGNKGEQQHAMG 124
>10_06_0145 + 11215895-11216860
Length = 321
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/88 (23%), Positives = 31/88 (35%)
Frame = +3
Query: 111 LQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXX 290
L A + L+ + T D A +++ S + P S R V
Sbjct: 193 LSASVDAKILQATTTTTADTAAAAAPASTNTTPPPSPRVVKTEPGCCSVSEASTTTTADA 252
Query: 291 XXIGLNSSPPSPTHNVPAAMDSLPIPTP 374
+ S PSPT + AA + P P P
Sbjct: 253 ADVSSTGSSPSPTSSNQAATATPPAPRP 280
>02_03_0134 - 15596379-15597689
Length = 436
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 120 PNSSAPLKTASMKTTDNATSSSNVSMESPQPSSART 227
P+SS +T + ++T + SSS S ++PQ SS+ T
Sbjct: 60 PSSSFSTRTGTSRSTFGSASSSIHSSKAPQTSSSTT 95
>01_01_0242 +
1997427-1997429,1997893-1998580,2000199-2000234,
2000786-2001114,2001178-2001855
Length = 577
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 301 D*TPAPQAQLTMSPPQWILCPSRPLC 378
D PA LT++PP W+ P RP C
Sbjct: 18 DCEPATCGNLTINPPFWLDEPGRPPC 43
>11_04_0364 - 16791774-16792490,16792545-16793561,16793856-16793920,
16794787-16796964,16797065-16797322,16799815-16800172
Length = 1530
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -2
Query: 336 HCELGLGGWSSVLSPQSTLKGWS--HLLIFLIV 244
HCE G+ WS +LS T KG S + LI LI+
Sbjct: 1495 HCEEGILSWSGILSLLITRKGNSDGNDLIILII 1527
>09_06_0205 -
21567467-21567655,21567791-21567876,21567965-21568037,
21568267-21568326,21568887-21568935,21569328-21569431,
21569587-21569640,21569719-21569763,21569817-21569879,
21570415-21570615,21570620-21570797,21570900-21570993,
21571075-21572478,21572560-21572604,21572710-21572788,
21573424-21573589,21573679-21573771,21573872-21573929,
21574063-21574120,21574210-21574367,21575130-21575177,
21575269-21575320,21575404-21575529
Length = 1160
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 344 RNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSVG--RQGCNEQQK 517
R+GF+ D + N I T+V C HF++ G C P+ VG + C+ ++K
Sbjct: 478 RDGFYVDFDKLNEDCLLNEISKTITDVSCPQMPHFND--GLC--PEDVGSSKSSCSVRKK 533
Query: 518 KTK 526
+K
Sbjct: 534 SSK 536
>09_04_0308 + 16567361-16568854,16568946-16569068,16569372-16569649,
16570316-16571924,16572363-16573781
Length = 1640
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -2
Query: 336 HCELGLGGWSSVLSPQSTLKGWS--HLLIFLIV 244
HCE G+ WS +LS T KG S + LI LI+
Sbjct: 1080 HCEEGILSWSGILSLLITRKGNSDGNDLIILII 1112
>07_03_1091 +
23899825-23900649,23900750-23900998,23901104-23901195,
23901413-23902193
Length = 648
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -2
Query: 570 PWASTSCSLGHSKPSFVFFCCSLHPCLPTESGQTQVPEYSSK 445
P S SL SKP FCCS C ++ + + SS+
Sbjct: 480 PTESPKLSLAESKPMTPLFCCSKPKCNCSKRSSRKASDGSSQ 521
>06_03_0548 + 22004338-22006746
Length = 802
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +2
Query: 419 EVKCTAGLHFDEYSGTCVWPDSVGRQGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFP 598
E+K G+ +Y+G VW ++V + Q K + +V ++G + F
Sbjct: 93 ELKSDGGMLLKDYNGQVVWTNNVSSSNAEQVQAKLLN----TGNLIVKSKGDTILWESFA 148
Query: 599 HPND 610
P D
Sbjct: 149 FPTD 152
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +3
Query: 339 PAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPS 488
P S P P PL T ST A A ++T+TP PA +PS
Sbjct: 17 PRQRSSPPRPRPLLCTPSTAAFRRG--------ALSATTTPTPARAALPS 58
>03_03_0094 + 14378953-14380728
Length = 591
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 453 STPVPASGPIPSEDKDVTNNKKKQRTASSAPKSS 554
STP PA+ P+ D+ T +KKK + SS
Sbjct: 2 STPPPAAAASPATDQGKTKSKKKSKKHQEDTSSS 35
>01_06_0554 +
30179641-30179658,30179725-30180126,30180580-30180892,
30180966-30181358,30181442-30182427
Length = 703
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3
Query: 386 CCTQRGRDGQRI 351
CCT+RGRDG R+
Sbjct: 116 CCTKRGRDGDRL 127
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,068,718
Number of Sequences: 37544
Number of extensions: 494588
Number of successful extensions: 2517
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2508
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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