Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1545
         (334 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL160033-4|CAI14454.1|  164|Homo sapiens chromosome 13 open read...    33   0.28 
AL160033-1|CAI14451.1|  195|Homo sapiens chromosome 13 open read...    33   0.28 
BC016750-1|AAH16750.1|  195|Homo sapiens chromosome 13 open read...    30   2.0  
AY145132-1|AAN61516.1| 2517|Homo sapiens p53-associated parkin-l...    28   6.0  
AL133375-1|CAI20204.1| 2518|Homo sapiens RP3-330M21.2 protein.         28   6.0  
AJ318215-1|CAC85756.1| 2517|Homo sapiens putative E3 ubiquitin l...    28   6.0  
AB014608-1|BAA31683.3| 1753|Homo sapiens KIAA0708 protein.             28   6.0  

>AL160033-4|CAI14454.1|  164|Homo sapiens chromosome 13 open reading
           frame 28 protein.
          Length = 164

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -2

Query: 159 ESLKKSP*RKGVQVKLRNSLKNCPCSLT*D-IEP*PGPNVSPGTEPE-SSKSNNS 1
           E+L+ SP   G++VK+ N   N   +L  D  E   GP VSPG+E   SSK  NS
Sbjct: 70  ENLQFSP---GIEVKISNDEANANANLHGDPSENYRGPQVSPGSEKSVSSKEKNS 121


>AL160033-1|CAI14451.1|  195|Homo sapiens chromosome 13 open reading
           frame 28 protein.
          Length = 195

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -2

Query: 159 ESLKKSP*RKGVQVKLRNSLKNCPCSLT*D-IEP*PGPNVSPGTEPE-SSKSNNS 1
           E+L+ SP   G++VK+ N   N   +L  D  E   GP VSPG+E   SSK  NS
Sbjct: 101 ENLQFSP---GIEVKISNDEANANANLHGDPSENYRGPQVSPGSEKSVSSKEKNS 152


>BC016750-1|AAH16750.1|  195|Homo sapiens chromosome 13 open reading
           frame 28 protein.
          Length = 195

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -2

Query: 159 ESLKKSP*RKGVQVKLRNSLKNCPCSLT*D-IEP*PGPNVSPGTEPE-SSKSNNS 1
           E+L+ SP   G++ K+ N   N   +L  D  E   GP VSPG+E   SSK  NS
Sbjct: 101 ENLQFSP---GIEDKISNDEANANANLHGDPSENYRGPQVSPGSEKSVSSKEKNS 152


>AY145132-1|AAN61516.1| 2517|Homo sapiens p53-associated parkin-like
            cytoplasmic protein protein.
          Length = 2517

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 87   CSLT*DIEP*PGPNVSPGTEPESSKS 10
            C L   +EP PGP+  P T P S  S
Sbjct: 1426 CHLLVHVEPPPGPSPEPSTRPFSKNS 1451


>AL133375-1|CAI20204.1| 2518|Homo sapiens RP3-330M21.2 protein.
          Length = 2518

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 87   CSLT*DIEP*PGPNVSPGTEPESSKS 10
            C L   +EP PGP+  P T P S  S
Sbjct: 1426 CHLLVHVEPPPGPSPEPSTRPFSKNS 1451


>AJ318215-1|CAC85756.1| 2517|Homo sapiens putative E3 ubiquitin ligase
            protein.
          Length = 2517

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 87   CSLT*DIEP*PGPNVSPGTEPESSKS 10
            C L   +EP PGP+  P T P S  S
Sbjct: 1426 CHLLVHVEPPPGPSPEPSTRPFSKNS 1451


>AB014608-1|BAA31683.3| 1753|Homo sapiens KIAA0708 protein.
          Length = 1753

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 87  CSLT*DIEP*PGPNVSPGTEPESSKS 10
           C L   +EP PGP+  P T P S  S
Sbjct: 662 CHLLVHVEPPPGPSPEPSTRPFSKNS 687


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,782,891
Number of Sequences: 237096
Number of extensions: 953174
Number of successful extensions: 1820
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1820
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)