Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1541
(351 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 67 4e-12
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 67 4e-12
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 62 1e-10
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 62 1e-10
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 59 1e-09
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 59 1e-09
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 59 1e-09
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 55 2e-08
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 55 2e-08
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 55 2e-08
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 54 4e-08
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 48 1e-06
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 46 1e-05
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 45 2e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 44 2e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 44 2e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 44 2e-05
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 44 3e-05
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 44 3e-05
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 44 3e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 44 4e-05
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 42 9e-05
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 42 9e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 41 3e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 41 3e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 41 3e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 41 3e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 41 3e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 40 4e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 40 4e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 40 4e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 40 4e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 4e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 40 4e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 40 4e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 40 4e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 40 5e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 40 7e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 40 7e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 9e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 39 0.001
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 39 0.001
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 39 0.001
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 39 0.001
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 38 0.002
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 38 0.002
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 38 0.002
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 38 0.002
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 38 0.003
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 38 0.003
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 38 0.003
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 38 0.003
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 38 0.003
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 38 0.003
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.004
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.004
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 36 0.006
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 36 0.006
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 36 0.008
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 36 0.008
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 36 0.008
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 36 0.011
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 36 0.011
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 34 0.025
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 34 0.033
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 33 0.076
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 33 0.076
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 33 0.076
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 32 0.13
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 32 0.13
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 32 0.13
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 32 0.13
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 31 0.18
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 31 0.31
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 30 0.54
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 29 0.71
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 1.2
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical pr... 28 1.6
U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate recep... 28 2.2
AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic gl... 28 2.2
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 2.9
AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical ... 27 2.9
Z78067-9|CAB01528.2| 450|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 27 3.8
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 27 3.8
U41550-1|AAA83284.1| 1057|Caenorhabditis elegans Hypothetical pr... 27 3.8
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 27 3.8
AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine re... 27 3.8
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 27 5.0
AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical ... 27 5.0
AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical ... 27 5.0
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 27 5.0
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 26 6.6
Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical p... 26 8.7
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 26 8.7
AC006660-3|AAM69102.1| 346|Caenorhabditis elegans Hypothetical ... 26 8.7
AC006660-2|AAZ91346.1| 348|Caenorhabditis elegans Hypothetical ... 26 8.7
AC006660-1|AAM69103.2| 368|Caenorhabditis elegans Hypothetical ... 26 8.7
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 66.9 bits (156), Expect = 4e-12
Identities = 29/57 (50%), Positives = 37/57 (64%)
Frame = +1
Query: 178 GRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFKVP 348
G D K+F+GGLSW+TT + LRD+ G +GE+ V DP T R+RGF FI F P
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDP 96
Score = 44.0 bits (99), Expect = 3e-05
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +1
Query: 193 RKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
+K+F+GGLS +T ++++ + YG++E + D T R RGF F+ F
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 66.9 bits (156), Expect = 4e-12
Identities = 29/57 (50%), Positives = 37/57 (64%)
Frame = +1
Query: 178 GRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFKVP 348
G D K+F+GGLSW+TT + LRD+ G +GE+ V DP T R+RGF FI F P
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDP 96
Score = 44.0 bits (99), Expect = 3e-05
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +1
Query: 193 RKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
+K+F+GGLS +T ++++ + YG++E + D T R RGF F+ F
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 62.1 bits (144), Expect = 1e-10
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +1
Query: 103 TVNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESV 282
T N++NGNA ++ N G ++D+K+FVGG+S E +++L H YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 283 NVKTDPNTGRSRGFDFIVF 339
VK D GRSRGF F+ F
Sbjct: 59 QVKYDRTNGRSRGFAFVEF 77
Score = 44.0 bits (99), Expect = 3e-05
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
+++K+FVGGL + ++++LR H +G+++ + D T R F FIVF+
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFE 159
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 62.1 bits (144), Expect = 1e-10
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +1
Query: 103 TVNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESV 282
T N++NGNA ++ N G ++D+K+FVGG+S E +++L H YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 283 NVKTDPNTGRSRGFDFIVF 339
VK D GRSRGF F+ F
Sbjct: 59 QVKYDRTNGRSRGFAFVEF 77
Score = 44.0 bits (99), Expect = 3e-05
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
+++K+FVGGL + ++++LR H +G+++ + D T R F FIVF+
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFE 159
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 58.8 bits (136), Expect = 1e-09
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = +1
Query: 127 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNT 306
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ +GEI + V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 307 GRSRGFDFIVF 339
RSRGF F+ F
Sbjct: 61 KRSRGFGFVTF 71
Score = 33.5 bits (73), Expect = 0.043
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 193 RKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++L+V G+ + T+ L ++ YG + + D T + RGF F+ F
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 58.8 bits (136), Expect = 1e-09
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = +1
Query: 127 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNT 306
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ +GEI + V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 307 GRSRGFDFIVF 339
RSRGF F+ F
Sbjct: 61 KRSRGFGFVTF 71
Score = 33.5 bits (73), Expect = 0.043
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 193 RKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++L+V G+ + T+ L ++ YG + + D T + RGF F+ F
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 58.8 bits (136), Expect = 1e-09
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = +1
Query: 127 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNT 306
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ +GEI + V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 307 GRSRGFDFIVF 339
RSRGF F+ F
Sbjct: 61 KRSRGFGFVTF 71
Score = 33.5 bits (73), Expect = 0.043
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 193 RKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++L+V G+ + T+ L ++ YG + + D T + RGF F+ F
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 54.8 bits (126), Expect = 2e-08
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +1
Query: 193 RKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
RKLF+GGLS +TTD++L ++ +G + V DPNT SRGF F+ F
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 97
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 54.8 bits (126), Expect = 2e-08
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +1
Query: 193 RKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
RKLF+GGLS +TTD++L ++ +G + V DPNT SRGF F+ F
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 117
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 54.8 bits (126), Expect = 2e-08
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +1
Query: 193 RKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
RKLF+GGLS +TTD++L ++ +G + V DPNT SRGF F+ F
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 118
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 53.6 bits (123), Expect = 4e-08
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +1
Query: 148 SQDHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRG 321
+Q N+ G D K+FVGGL + T+DK L ++ +G+IE V TD NT +SRG
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRG 77
Query: 322 FDFIVFK 342
+ F+ K
Sbjct: 78 YGFVTMK 84
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 48.4 bits (110), Expect = 1e-06
Identities = 27/75 (36%), Positives = 37/75 (49%)
Frame = +1
Query: 121 GNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDP 300
G GGG + + + L V LS TT+K+LRD G +GEI ++ D
Sbjct: 52 GGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDR 111
Query: 301 NTGRSRGFDFIVFKV 345
+G SRGF FI F +
Sbjct: 112 PSGNSRGFGFIYFNL 126
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 45.6 bits (103), Expect = 1e-05
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 163 SAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
+AE + D R ++VG + W++T E+ +H G++ V + D TG + F F+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 44.8 bits (101), Expect = 2e-05
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +1
Query: 160 NSAEAPGRDDD--RKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFI 333
N AE P +D R LFVG +++ET++ +LR AYG+I+ + + D G+ RG+ FI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 334 VF 339
+
Sbjct: 150 EY 151
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFKVP 348
L+V + + D LRDH ++G I S V D N GRS+GF F+ F+ P
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKP 393
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFKVP 348
L+V + + D LRDH ++G I S V D N GRS+GF F+ F+ P
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKP 393
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 44.4 bits (100), Expect = 2e-05
Identities = 24/87 (27%), Positives = 46/87 (52%)
Frame = +1
Query: 82 NSAQDITTVNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGA 261
N +I N++N E G + D + D +++GGLS+ ++ ++
Sbjct: 2 NPITNIKNQNRMN-ERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQ 60
Query: 262 YGEIESVNVKTDPNTGRSRGFDFIVFK 342
YGE+ ++N+ D +TG+S+GF F+ +K
Sbjct: 61 YGEVMNINLIRDKDTGKSKGFAFLCYK 87
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 44.0 bits (99), Expect = 3e-05
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = +1
Query: 196 KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFKVP 348
+++VG +S+E + LR +G I+S+N+ DP TG + F F+ ++VP
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVP 153
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 44.0 bits (99), Expect = 3e-05
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = +1
Query: 196 KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFKVP 348
+++VG +S+E + LR +G I+S+N+ DP TG + F F+ ++VP
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVP 153
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 44.0 bits (99), Expect = 3e-05
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = +1
Query: 196 KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFKVP 348
+++VG +S+E + LR +G I+S+N+ DP TG + F F+ ++VP
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVP 153
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 43.6 bits (98), Expect = 4e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++VG ++TT++EL + + G+I +V + D TGR RGF FI F
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEF 53
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +1
Query: 106 VNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVN 285
V +N N + SQ + E D + ++VG + + T +E+ H G + V
Sbjct: 49 VGHMNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVT 108
Query: 286 VKTDPNTGRSRGFDFIVF 339
++ D +G +GF ++ F
Sbjct: 109 IQCDRFSGHPKGFAYVEF 126
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 42.3 bits (95), Expect = 9e-05
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 169 EAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
EA ++ + +++ + W T +L + YG I+SVN+ DP+TG RGF I F
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITF 73
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 41.5 bits (93), Expect = 2e-04
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++VG + ++ T++E+ ++ A G + +V + D TGR RGF F+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 40.7 bits (91), Expect = 3e-04
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 190 DRKLFVGGLSWETTDKELRDH-SGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
D +FVG L +E T+ L S G +E+V + D +TG+ +GF F+ FK
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFK 296
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 40.7 bits (91), Expect = 3e-04
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +1
Query: 154 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFI 333
+ + AE + L+V L D L+ +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 334 VFKVP 348
F+ P
Sbjct: 363 CFEKP 367
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 40.7 bits (91), Expect = 3e-04
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +1
Query: 154 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFI 333
+ + AE + L+V L D L+ +YG I S V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302
Query: 334 VFKVP 348
F+ P
Sbjct: 303 CFEKP 307
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 40.7 bits (91), Expect = 3e-04
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +1
Query: 154 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFI 333
+ + AE + L+V L D L+ +YG I S V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299
Query: 334 VFKVP 348
F+ P
Sbjct: 300 CFEKP 304
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 40.7 bits (91), Expect = 3e-04
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +1
Query: 154 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFI 333
+ + AE + L+V L D L+ +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 334 VFKVP 348
F+ P
Sbjct: 363 CFEKP 367
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 40.3 bits (90), Expect = 4e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +1
Query: 154 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFI 333
D A + DD+KLF+G LS + ++ E+R +GE++ V V + G S+G F+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 334 VFK 342
+K
Sbjct: 170 KYK 172
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++RKLF+G LS + ++ LR+ +G IE +V D + G+SRG F+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 32.7 bits (71), Expect = 0.076
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 154 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFD 327
D++ + +P D K+FVG + + + + R YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 328 FIVF 339
F+ F
Sbjct: 100 FVTF 103
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++RKLF+G LS + ++ LR+ +G IE +V D + G+SRG F+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 32.7 bits (71), Expect = 0.076
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 154 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFD 327
D++ + +P D K+FVG + + + + R YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 328 FIVF 339
F+ F
Sbjct: 100 FVTF 103
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++RKLF+G LS + ++ LR+ +G IE +V D + G+SRG F+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 32.7 bits (71), Expect = 0.076
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 154 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFD 327
D++ + +P D K+FVG + + + + R YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 328 FIVF 339
F+ F
Sbjct: 100 FVTF 103
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++RKLF+G LS + ++ LR+ +G IE +V D + G+SRG F+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 32.7 bits (71), Expect = 0.076
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 154 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFD 327
D++ + +P D K+FVG + + + + R YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 328 FIVF 339
F+ F
Sbjct: 100 FVTF 103
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++RKLF+G LS + ++ LR+ +G IE +V D + G+SRG F+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 32.7 bits (71), Expect = 0.076
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 154 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFD 327
D++ + +P D K+FVG + + + + R YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 328 FIVF 339
F+ F
Sbjct: 100 FVTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++RKLF+G LS + ++ LR+ +G IE +V D + G+SRG F+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 32.7 bits (71), Expect = 0.076
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 154 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFD 327
D++ + +P D K+FVG + + + + R YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 328 FIVF 339
F+ F
Sbjct: 100 FVTF 103
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 40.3 bits (90), Expect = 4e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +1
Query: 154 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFI 333
D A + DD+KLF+G LS + ++ E+R +GE++ V V + G S+G F+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 334 VFK 342
+K
Sbjct: 170 KYK 172
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 39.9 bits (89), Expect = 5e-04
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++VG ++TT+ +L ++ G + +V + D TGR RGF F+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 39.5 bits (88), Expect = 7e-04
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +1
Query: 127 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNT 306
+ GGGD + AP + L + LS++TT +LR YG+I V++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 307 GRSRGFDFIVF 339
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 39.5 bits (88), Expect = 7e-04
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +1
Query: 127 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNT 306
+ GGGD + AP + L + LS++TT +LR YG+I V++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 307 GRSRGFDFIVF 339
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 39.1 bits (87), Expect = 9e-04
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +1
Query: 193 RKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
R L+VGG + + T+K L +G++ ++++ D +G+ RGF F+ F
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
+FVG LS E +++LR+ +G++ V D NT +S+G+ F+ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 70
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
+FVG LS E +++LR+ +G++ V D NT +S+G+ F+ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 80
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
+FVG LS E +++LR+ +G++ V D NT +S+G+ F+ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 183
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
+FVG LS E +++LR+ +G++ V D NT +S+G+ F+ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 151
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 178 GRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
G +D+K++VG L + +KE+ D YG I+ V++K +GR F F+ F+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFE 54
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 178 GRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
G +D+K++VG L + +KE+ D YG I+ V++K +GR F F+ F+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFE 54
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
D R L + ++ +T ++L + A G + V + TD TGRS+G ++ F
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 73
Score = 33.9 bits (74), Expect = 0.033
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 172 APGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
APG + V L + +K +RD ++G IE ++++ D N +RGF I F+
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFR 175
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
D R L + ++ +T ++L + A G + V + TD TGRS+G ++ F
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 218
Score = 33.9 bits (74), Expect = 0.033
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 172 APGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
APG + V L + +K +RD ++G IE ++++ D N +RGF I F+
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFR 320
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 178 GRD-DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
G D R +FVG +S++ ++ +R G + S+ + D TG+ +G+ FI F
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +1
Query: 196 KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
++FVGG TT+ ELR+H + ++ V + + G+S+G+ FI F+
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFE 114
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 37.5 bits (83), Expect = 0.003
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 82 NSAQDITTVNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 252
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 253 SGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
+G++E V++KT NT + F++F+
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQ 216
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +1
Query: 193 RKLFVGGL-SWETTDKE-LRDHSGAYGEIESVN 285
R+LFVGGL SW DKE L+ G +G +E+++
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 37.5 bits (83), Expect = 0.003
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 82 NSAQDITTVNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 252
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 253 SGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
+G++E V++KT NT + F++F+
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQ 216
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +1
Query: 193 RKLFVGGL-SWETTDKE-LRDHSGAYGEIESVN 285
R+LFVGGL SW DKE L+ G +G +E+++
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 37.5 bits (83), Expect = 0.003
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 82 NSAQDITTVNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 252
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 106 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 165
Query: 253 SGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
+G++E V++KT NT + F++F+
Sbjct: 166 FEEHGKVEEVDIKTPINT--DAAYAFVMFQ 193
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +1
Query: 193 RKLFVGGL-SWETTDKE-LRDHSGAYGEIESVN 285
R+LFVGGL SW DKE L+ G +G +E+++
Sbjct: 228 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 258
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +1
Query: 196 KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
++FVGG TT+ ELR+H + ++ V + + G+S+G+ FI F+
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFE 115
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.1 bits (82), Expect = 0.004
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 163 SAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESV-NVKTDPNTGRSRGFDFIVF 339
SA D +FVG L E +K L D A+G I V + D ++G S+GF FI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Score = 34.3 bits (75), Expect = 0.025
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 181 RDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
R+ D ++VGGL + ++ L + G + SVN+ D T +GF F+ F
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEF 61
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.004
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 163 SAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESV-NVKTDPNTGRSRGFDFIVF 339
SA D +FVG L E +K L D A+G I V + D ++G S+GF FI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Score = 34.3 bits (75), Expect = 0.025
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 181 RDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
R+ D ++VGGL + ++ L + G + SVN+ D T +GF F+ F
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEF 71
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 241 LRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
+R+ +GEI + V DP T RSRGF F+ F
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 33
Score = 33.5 bits (73), Expect = 0.043
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 193 RKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++L+V G+ + T+ L ++ YG + + D T + RGF F+ F
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 124
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 241 LRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
+R+ +GEI + V DP T RSRGF F+ F
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 33
Score = 33.5 bits (73), Expect = 0.043
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 193 RKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
++L+V G+ + T+ L ++ YG + + D T + RGF F+ F
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 124
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 196 KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFKVP 348
+LF+ L + T + +L+ YGE+ V V D TG +GF + F P
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFP 330
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 35.9 bits (79), Expect = 0.008
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 181 RDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFK 342
R D+ V L E + ELRD G G + + + D TG +GF F+ F+
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFE 225
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 35.9 bits (79), Expect = 0.008
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRG 321
++RKLF+G LS + ++ LR+ +G IE +V D + G+SRG
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
Score = 32.7 bits (71), Expect = 0.076
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 154 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFD 327
D++ + +P D K+FVG + + + + R YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 328 FIVF 339
F+ F
Sbjct: 100 FVTF 103
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 35.5 bits (78), Expect = 0.011
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNV 288
D+ ++VG +S +TTD +LRD YG+I V +
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI 268
Score = 35.1 bits (77), Expect = 0.014
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = +1
Query: 157 HNSAEAPG--RDDDRK---LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRG 321
H+++E P R D K +FVG LS + +++ L+ +GE+ V D T +S+G
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 322 FDFIVF 339
+ F+ F
Sbjct: 178 YGFVSF 183
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 35.5 bits (78), Expect = 0.011
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Frame = +1
Query: 85 SAQDITTVNQLNGNAENGGG--DSQDHNSAEAPGRDD-----DRKLFVGGLSWETTDKEL 243
SA + + + + N E+G DS E P RD RK+FVGG+ W+ T+ L
Sbjct: 252 SANEESPMKRKNFQQEHGNKNRDSDATWFGELPPRDYTSPTFSRKIFVGGVPWDITEAAL 311
Query: 244 RDHSGAYG 267
+D G +G
Sbjct: 312 KDSFGEFG 319
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 34.3 bits (75), Expect = 0.025
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
+FVG L E +LR+ +GE+ + D NT + +G+ F+ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 33.9 bits (74), Expect = 0.033
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
D + +F+G + + +T +E+ +H G+I + D T + + F +I F
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEF 103
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 32.7 bits (71), Expect = 0.076
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 172 APGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGR-SRGFDFIVFK 342
APG +D R +FV L + TT+ E+R A + S+ N+ RGF ++V +
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVME 640
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 32.7 bits (71), Expect = 0.076
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +1
Query: 211 GLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
GL WE T++ELRD G G IES+ + GR+ G +VF
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVF 50
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 32.7 bits (71), Expect = 0.076
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +1
Query: 211 GLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
GL WE T++ELRD G G IES+ + GR+ G +VF
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVF 50
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/55 (25%), Positives = 32/55 (58%)
Frame = +1
Query: 184 DDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFKVP 348
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+ F + P
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDP 341
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/55 (25%), Positives = 32/55 (58%)
Frame = +1
Query: 184 DDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFKVP 348
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+ F + P
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDP 341
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/55 (25%), Positives = 32/55 (58%)
Frame = +1
Query: 184 DDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFKVP 348
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+ F + P
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDP 316
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/55 (25%), Positives = 32/55 (58%)
Frame = +1
Query: 184 DDDRKLFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVFKVP 348
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+ F + P
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDP 319
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 31.5 bits (68), Expect = 0.18
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 118 NGNAENGGG-DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIES 279
+G+A +GG D D + A DDRK+ V +S + T +L+ YG+I S
Sbjct: 86 DGDAFDGGETDDFDASIAFQHTSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITS 140
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFI 333
L + L T +E+R + GEIES + D TG+S G+ F+
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFV 88
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
L+V G+ T EL +G+I + + +D TG S+G F+ F
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRF 176
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 29.9 bits (64), Expect = 0.54
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Frame = +1
Query: 187 DDRKLFVGGLSWETTDKEL-RDHSGAYGEIESV-----NVKTDPNTGRSRGFDFIVFK 342
++R+++VG + ++ T+KEL D Y IE+V +K+ R GF F+ FK
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 29.5 bits (63), Expect = 0.71
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 184 DDDRKLFVGGLSWETTDKEL-RDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
D R +F+GG+ T ++L R G YG++ V + DP +G + F
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTF 414
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/27 (33%), Positives = 20/27 (74%)
Frame = +1
Query: 193 RKLFVGGLSWETTDKELRDHSGAYGEI 273
RK+F+GGL + +++++ GA+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/79 (22%), Positives = 33/79 (41%)
Frame = +1
Query: 103 TVNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHSGAYGEIESV 282
T+ G + GG A P +++VG + + + L G+I +
Sbjct: 171 TIEVTIGQRKFGGPPPDWEGPATGPA-GQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDL 229
Query: 283 NVKTDPNTGRSRGFDFIVF 339
+ DP +G SRG+ F+ +
Sbjct: 230 RLMMDPMSGASRGYAFVTY 248
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
LFV L+ TTD++L +G+I + + D +G S + FI F
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
LFV L+ TTD++L +G+I + + D +G S + FI F
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 199 LFVGGLSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIVF 339
LFV L+ TTD++L +G+I + + D +G S + FI F
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 220
>Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical
protein B0001.3b protein.
Length = 575
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 85 SAQDITTVNQLNGNAENGGGDSQDHNSAEAPGRDDD 192
S D+ N+ N ++ + GGDS + E DDD
Sbjct: 413 SPDDVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 448
>Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical
protein B0001.3a protein.
Length = 591
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 85 SAQDITTVNQLNGNAENGGGDSQDHNSAEAPGRDDD 192
S D+ N+ N ++ + GGDS + E DDD
Sbjct: 429 SPDDVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 464
>U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 8 protein.
Length = 489
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 228 GLPAQPTNKKFSVVIASWGLSTVMILRITATVLCISIKLVDGGNI 94
GLP QP + V++A W L+++ L T T +++ VD N+
Sbjct: 185 GLPEQPRSWSCRVLVALWWLASI-TLSATFTGSLVALFAVDKTNV 228
>AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic
glutamate receptor GLR-8 protein.
Length = 406
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 228 GLPAQPTNKKFSVVIASWGLSTVMILRITATVLCISIKLVDGGNI 94
GLP QP + V++A W L+++ L T T +++ VD N+
Sbjct: 177 GLPEQPRSWSCRVLVALWWLASI-TLSATFTGSLVALFAVDKTNV 220
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical protein
K08E4.1 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +1
Query: 142 GDSQDHNSAEAP--GRDDDRKLFVGGLSWETTDKELRDHSG---AYGEIESVNVKTDPNT 306
GD +H+S+ P G D R G T G AYG +++ ++
Sbjct: 857 GDLDEHSSSRTPAYGNDSSRTPAYGSADGARTPAYGSTEGGRTPAYGSMDNSRTPAYDDS 916
Query: 307 GRSRGFDFIVFKVP 348
GR+ G++ + + P
Sbjct: 917 GRTPGYESMPSRTP 930
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical protein
K08E4.1 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +1
Query: 142 GDSQDHNSAEAP--GRDDDRKLFVGGLSWETTDKELRDHSG---AYGEIESVNVKTDPNT 306
GD +H+S+ P G D R G T G AYG +++ ++
Sbjct: 857 GDLDEHSSSRTPAYGNDSSRTPAYGSADGARTPAYGSTEGGRTPAYGSMDNSRTPAYDDS 916
Query: 307 GRSRGFDFIVFKVP 348
GR+ G++ + + P
Sbjct: 917 GRTPGYESMPSRTP 930
>AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical
protein C55B7.5 protein.
Length = 446
Score = 27.5 bits (58), Expect = 2.9
Identities = 21/89 (23%), Positives = 43/89 (48%)
Frame = +1
Query: 52 RRNLVMANNDNSAQDITTVNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETT 231
R+N M+ ND + I N+LNG+ ++ ++ + +D+ + +E +
Sbjct: 150 RKNKKMSQNDEQNEKIIEKNKLNGDQDHNDVMNRLEELEKLEQDNDEMEEAPIPKPFEVS 209
Query: 232 DKELRDHSGAYGEIESVNVKTDPNTGRSR 318
+++L+D G E+E V+ DP + R
Sbjct: 210 NEDLQD-LGKLEEVE--EVEQDPTDKKLR 235
>Z78067-9|CAB01528.2| 450|Caenorhabditis elegans Hypothetical
protein ZC412.1 protein.
Length = 450
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -1
Query: 255 RMIT*LLICGLPAQPTNKKFSVVIASWGLSTVMILRITATV 133
R I +++C L PT + FSV+I+SW L + I R + V
Sbjct: 93 RWIFGIIMCKLV--PTCQAFSVLISSWSLCYIAIDRYRSIV 131
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 73 NNDNSAQDITTVNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 198
N++N + + N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 73 NNDNSAQDITTVNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 198
N++N + + N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>U41550-1|AAA83284.1| 1057|Caenorhabditis elegans Hypothetical
protein R04A9.2 protein.
Length = 1057
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 214 LSWETTDKELRDHSGAYGEIESVNVKTDPNTGRSRGFDFIV 336
+S ET DK +RDH G I++V K +P G G +F++
Sbjct: 704 ISSETADKFMRDHGGKQ-TIDNVIRKLNPKCG---GTNFLI 740
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +1
Query: 127 AENGGGDSQDHNSAEAPGRDDDR---KLFVG 210
AE GGG+S D +S D+R KLFVG
Sbjct: 603 AELGGGNSNDDDSMSGSNSADEREPYKLFVG 633
>AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine
receptor, class w protein95 protein.
Length = 363
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 152 CESPPPFSAFPLSWLTVVIS 93
CE P P S F + W+ VVI+
Sbjct: 107 CEPPAPLSFFYMYWINVVIN 126
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 187 DDRKLFVGGLSWET-TDKELRDHSGAYGEIESVNVKTD 297
+ ++LFV + T KEL+ + GAYG+I V +D
Sbjct: 29 ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD 66
>AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical
protein Y110A2AL.5 protein.
Length = 246
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -1
Query: 231 CGLPAQPTNKKFSVVIASWGLSTVMILRITATVLCI 124
C P QP + S+V+ W + + R A CI
Sbjct: 143 CPAPGQPFRRTESLVVCIWTFNETVATREEAKTFCI 178
>AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical
protein C15F1.5b protein.
Length = 311
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 193 CRHRVLGPQHCYDLANHRHRS 131
C H + QHCYDLA+ + +S
Sbjct: 11 CHHDIC--QHCYDLASRKEKS 29
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 193 CRHRVLGPQHCYDLANHRHRS 131
C H + QHCYDLA+ + +S
Sbjct: 81 CHHDIC--QHCYDLASRKEKS 99
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 118 NGNAENGGGDSQDHNSAEAPGRDDD 192
N A+N GGD+Q+ +AE P ++ +
Sbjct: 633 NMAAKNSGGDAQEAKTAEEPKKEQN 657
>Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 77 TIILHKILPPSTS-LMEMQRTVAVIRKIITVLRPQD 181
T+I+++++ S LM+M + AVI + + V+ P+D
Sbjct: 653 TVIINELMGDDLSKLMQMSKGRAVITRTLKVVEPRD 688
>Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 77 TIILHKILPPSTS-LMEMQRTVAVIRKIITVLRPQD 181
T+I+++++ S LM+M + AVI + + V+ P+D
Sbjct: 653 TVIINELMGDDLSKLMQMSKGRAVITRTLKVVEPRD 688
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 25.8 bits (54), Expect = 8.7
Identities = 19/65 (29%), Positives = 24/65 (36%)
Frame = +1
Query: 76 NDNSAQDITTVNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHS 255
NDN NGN++N GG S S G D D G SW+ + +
Sbjct: 256 NDNDGNSWKGSGNSNGNSDNWGGSS---GSGSNGGNDGDSNYGNEG-SWKPSGNSYGRNR 311
Query: 256 GAYGE 270
G E
Sbjct: 312 GGGNE 316
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 25.8 bits (54), Expect = 8.7
Identities = 19/65 (29%), Positives = 24/65 (36%)
Frame = +1
Query: 76 NDNSAQDITTVNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHS 255
NDN NGN++N GG S S G D D G SW+ + +
Sbjct: 256 NDNDGNSWKGSGNSNGNSDNWGGSS---GSGSNGGNDGDSNYGNEG-SWKPSGNSYGRNR 311
Query: 256 GAYGE 270
G E
Sbjct: 312 GGGNE 316
>AC006660-3|AAM69102.1| 346|Caenorhabditis elegans Hypothetical
protein H18N23.2a protein.
Length = 346
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +1
Query: 139 GGDSQDHNSAEAPGRDDDRKLFVGG----LSWETTDKELRDHSGAYGEIESVNVKTDPN 303
G D Q H+S+ + DD +LF G E K +R E+ V V T+P+
Sbjct: 79 GSDYQSHSSSSSECEVDDLELFCAGPLELKEEEKLRKSVRFADDCGHELYMVRVATEPS 137
>AC006660-2|AAZ91346.1| 348|Caenorhabditis elegans Hypothetical
protein H18N23.2c protein.
Length = 348
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +1
Query: 139 GGDSQDHNSAEAPGRDDDRKLFVGG----LSWETTDKELRDHSGAYGEIESVNVKTDPN 303
G D Q H+S+ + DD +LF G E K +R E+ V V T+P+
Sbjct: 81 GSDYQSHSSSSSECEVDDLELFCAGPLELKEEEKLRKSVRFADDCGHELYMVRVATEPS 139
>AC006660-1|AAM69103.2| 368|Caenorhabditis elegans Hypothetical
protein H18N23.2b protein.
Length = 368
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +1
Query: 139 GGDSQDHNSAEAPGRDDDRKLFVGG----LSWETTDKELRDHSGAYGEIESVNVKTDPN 303
G D Q H+S+ + DD +LF G E K +R E+ V V T+P+
Sbjct: 101 GSDYQSHSSSSSECEVDDLELFCAGPLELKEEEKLRKSVRFADDCGHELYMVRVATEPS 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,155,089
Number of Sequences: 27780
Number of extensions: 161448
Number of successful extensions: 651
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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