Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1538
         (493 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79783-1|CAB02143.1|  415|Homo sapiens G PROTEIN-COUPLED RECEPTO...    29   8.8  
X95876-1|CAA65126.1|  368|Homo sapiens G-protein coupled recepto...    29   8.8  
U32674-1|AAC50505.1|  364|Homo sapiens GPR9 protein.                   29   8.8  
BC034403-1|AAH34403.1|  368|Homo sapiens chemokine (C-X-C motif)...    29   8.8  
AY242128-1|AAO92295.1|  368|Homo sapiens chemokine (C-X-C motif)...    29   8.8  
AF469635-1|AAP55851.1|  415|Homo sapiens CXC chemokine receptor ...    29   8.8  

>Z79783-1|CAB02143.1|  415|Homo sapiens G PROTEIN-COUPLED RECEPTOR
           CKR-L2 protein.
          Length = 415

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 328 LKMFYCYFKIFIITSNLSGARVMFSVRVASSRVYEFLSPWFPYSVVDVVLIVI 486
           L M YCY  I  +     G R + ++R+    V  F   W PY +V +V I++
Sbjct: 276 LVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILM 328


>X95876-1|CAA65126.1|  368|Homo sapiens G-protein coupled receptor
           protein.
          Length = 368

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 328 LKMFYCYFKIFIITSNLSGARVMFSVRVASSRVYEFLSPWFPYSVVDVVLIVI 486
           L M YCY  I  +     G R + ++R+    V  F   W PY +V +V I++
Sbjct: 229 LVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILM 281


>U32674-1|AAC50505.1|  364|Homo sapiens GPR9 protein.
          Length = 364

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 328 LKMFYCYFKIFIITSNLSGARVMFSVRVASSRVYEFLSPWFPYSVVDVVLIVI 486
           L M YCY  I  +     G R + ++R+    V  F   W PY +V +V I++
Sbjct: 225 LVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILM 277


>BC034403-1|AAH34403.1|  368|Homo sapiens chemokine (C-X-C motif)
           receptor 3 protein.
          Length = 368

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 328 LKMFYCYFKIFIITSNLSGARVMFSVRVASSRVYEFLSPWFPYSVVDVVLIVI 486
           L M YCY  I  +     G R + ++R+    V  F   W PY +V +V I++
Sbjct: 229 LVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILM 281


>AY242128-1|AAO92295.1|  368|Homo sapiens chemokine (C-X-C motif)
           receptor 3 protein.
          Length = 368

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 328 LKMFYCYFKIFIITSNLSGARVMFSVRVASSRVYEFLSPWFPYSVVDVVLIVI 486
           L M YCY  I  +     G R + ++R+    V  F   W PY +V +V I++
Sbjct: 229 LVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILM 281


>AF469635-1|AAP55851.1|  415|Homo sapiens CXC chemokine receptor
           transcript variant B protein.
          Length = 415

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 328 LKMFYCYFKIFIITSNLSGARVMFSVRVASSRVYEFLSPWFPYSVVDVVLIVI 486
           L M YCY  I  +     G R + ++R+    V  F   W PY +V +V I++
Sbjct: 276 LVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILM 328


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,353,544
Number of Sequences: 237096
Number of extensions: 1176091
Number of successful extensions: 2155
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2155
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)