Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1536
         (745 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U11691-1|AAA19905.1|  796|Drosophila melanogaster E239.9-1 protein.    34   0.18 
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.       34   0.18 
U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein.     33   0.54 
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB...    29   5.1  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    29   5.1  
AY119202-1|AAM51062.1|  500|Drosophila melanogaster SD13634p pro...    29   8.8  
AF398410-1|AAK97480.1|  500|Drosophila melanogaster skinny hedge...    29   8.8  
AF393157-1|AAK73748.1|  500|Drosophila melanogaster sightless pr...    29   8.8  
AE014296-575|AAF47725.1|  500|Drosophila melanogaster CG11495-PA...    29   8.8  

>U11691-1|AAA19905.1|  796|Drosophila melanogaster E239.9-1 protein.
          Length = 796

 Score = 34.3 bits (75), Expect = 0.18
 Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +1

Query: 325 HIQLADSHFNIPAQIDILLGAEVFMQILR--PTKLIGPPGKPDLLETAFGYIL 477
           + +LAD  FN P +ID+++GA+V+  IL+    K+ G  G+    +T FG+I+
Sbjct: 539 NFKLADPDFNKPGRIDLIIGADVYTHILQNGVIKIDGLLGQ----KTDFGWIV 587


>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
          Length = 2360

 Score = 34.3 bits (75), Expect = 0.18
 Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +1

Query: 325 HIQLADSHFNIPAQIDILLGAEVFMQILR--PTKLIGPPGKPDLLETAFGYIL 477
           + +LAD  FN P +ID+++GA+V+  IL+    K+ G  G+    +T FG+I+
Sbjct: 618 NFKLADPDFNKPGRIDLIIGADVYTHILQNGVIKIDGLLGQ----KTDFGWIV 666


>U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein.
          Length = 1607

 Score = 32.7 bits (71), Expect = 0.54
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +1

Query: 322 CHIQLADSHFNIPAQIDILLGAEVFMQILRPTKLIGPPGKPDLLETAFGYILLRSIVSLP 501
           C + LAD  F  P  ID+++G++    +    +       P  L T FG+IL  S  +  
Sbjct: 425 CELPLADPTFCTPGAIDVIVGSDQLWSLYTGDRKHFGNDFPIALNTVFGWILAGSYSAFD 484

Query: 502 CH 507
            H
Sbjct: 485 DH 486


>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
            isoform B protein.
          Length = 7744

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -2

Query: 105  LQTETHYCFTAETGKVVISNRADSQEVLTPVIT 7
            LQT  +Y  T + G+++++N  D  E L PV++
Sbjct: 2619 LQTVKNYIKTFDNGQILLNNAVDIGEALYPVVS 2651


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -2

Query: 105  LQTETHYCFTAETGKVVISNRADSQEVLTPVIT 7
            LQT  +Y  T + G+++++N  D  E L PV++
Sbjct: 2619 LQTVKNYIKTFDNGQILLNNAVDIGEALYPVVS 2651


>AY119202-1|AAM51062.1|  500|Drosophila melanogaster SD13634p
           protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 108 WSSRCNYTETLELIIQGGWRILRVC 182
           W+ R  YTE + +I+   W +LR C
Sbjct: 164 WTDRVGYTEYVLVIVTMSWSVLRGC 188


>AF398410-1|AAK97480.1|  500|Drosophila melanogaster skinny hedgehog
           protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 108 WSSRCNYTETLELIIQGGWRILRVC 182
           W+ R  YTE + +I+   W +LR C
Sbjct: 164 WTDRVGYTEYVLVIVTMSWSVLRGC 188


>AF393157-1|AAK73748.1|  500|Drosophila melanogaster sightless
           protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 108 WSSRCNYTETLELIIQGGWRILRVC 182
           W+ R  YTE + +I+   W +LR C
Sbjct: 164 WTDRVGYTEYVLVIVTMSWSVLRGC 188


>AE014296-575|AAF47725.1|  500|Drosophila melanogaster CG11495-PA
           protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 108 WSSRCNYTETLELIIQGGWRILRVC 182
           W+ R  YTE + +I+   W +LR C
Sbjct: 164 WTDRVGYTEYVLVIVTMSWSVLRGC 188


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,743,270
Number of Sequences: 53049
Number of extensions: 773170
Number of successful extensions: 1794
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1794
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)