Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1536
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   3.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   5.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   9.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   9.2  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 431 RLENLIYWKPHLDTY 475
           +L N+++W P   TY
Sbjct: 221 KLRNIVHWTPFFQTY 235


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 431 RLENLIYWKPHLDTY 475
           +L N+++W P   TY
Sbjct: 136 KLRNIVHWTPFFQTY 150


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 431 RLENLIYWKPHLDTY 475
           +L N+++W P   TY
Sbjct: 455 KLRNIVHWTPFFQTY 469


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 570 RAGGYHYPAYFC 605
           RA GYHY A  C
Sbjct: 193 RASGYHYNALTC 204


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 633 SNRNALLLHGRNRQGSGTHPRGLTRGPTTSKQMTVL 526
           +  NA+LL GR+++ +   P G T  P    +M  L
Sbjct: 366 TKENAMLLSGRSQKSTTGPPPGPT--PAQKARMRAL 399


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/40 (22%), Positives = 19/40 (47%)
 Frame = +1

Query: 466 GYILLRSIVSLPCHNILNLFKYCHLFTGGRTSCESARVGT 585
           GY++  S +S      + +F Y  ++       +S ++GT
Sbjct: 205 GYLIFSSTISFYLPLFVMVFTYYKIYRAAVIQTKSLKLGT 244


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,811
Number of Sequences: 438
Number of extensions: 4681
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)