Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1535
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    39   1e-04
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              37   8e-04
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    31   0.051
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    26   1.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   1.5  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   2.5  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   2.5  
EF519475-1|ABP73559.1|  165|Anopheles gambiae CTLMA2 protein.          25   3.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   3.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   5.9  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 39.1 bits (87), Expect = 1e-04
 Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
 Frame = -2

Query: 562 RQPQVQRKLQRERSP*RQQARSTSQ---LRV*RGRSMRRWLEHREQSMSRKMVIHERLWT 392
           RQ Q Q + QR++ P +QQ +   Q     V RGR  +R  + ++Q   ++    ER   
Sbjct: 208 RQQQQQCQQQRQQQPQQQQLQQPQQQLWTTVVRGRPSQRHRQPQQQQQQQQQQ-GERYVP 266

Query: 391 SKKILRKQLEKWSWSQPEMQHKRTMVQWRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQ 212
            +   ++Q ++    Q + Q ++   Q    +  Q       QQH+++Q+QQ    + +Q
Sbjct: 267 PQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQ 326

Query: 211 HRRQRCGHRERCELSKKRPKTQ 146
            ++QR   + + +  +++ + Q
Sbjct: 327 RQQQRQQQQRQQQQQQQQQQRQ 348



 Score = 34.3 bits (75), Expect = 0.004
 Identities = 27/129 (20%), Positives = 59/129 (45%)
 Frame = -2

Query: 556 PQVQRKLQRERSP*RQQARSTSQLRV*RGRSMRRWLEHREQSMSRKMVIHERLWTSKKIL 377
           PQ++++ Q+++ P +QQ +   Q +    R +   L  + Q    +    ++    ++  
Sbjct: 267 PQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQ 326

Query: 376 RKQLEKWSWSQPEMQHKRTMVQWRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRRQR 197
           R+Q  +    Q + Q ++   Q +     Q       QQH+++Q+Q     + +Q  RQ 
Sbjct: 327 RQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQ----QQHQQQQQQWQQQQQQQQQPRQS 382

Query: 196 CGHRERCEL 170
             HR++ +L
Sbjct: 383 LPHRKQTQL 391



 Score = 30.7 bits (66), Expect = 0.051
 Identities = 22/106 (20%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
 Frame = -2

Query: 547 QRKLQRERSP*RQQARSTSQLRV*RGRSMRRWLEHREQSMSRKMVIHE---RLWTSKKIL 377
           Q + QR++   +QQ +   Q R  + R  +R  + R+Q   ++    +   R    ++  
Sbjct: 301 QLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQ 360

Query: 376 RKQLEKWSWSQPEMQHKRTMVQWRTNMLGQ*HMSMLVQQHKRRQEQ 239
           + Q ++  W Q + Q ++           Q  +S  +QQ +++Q+Q
Sbjct: 361 QHQQQQQQWQQQQQQQQQPRQSLPHRKQTQLQLSPRLQQQQQQQQQ 406



 Score = 29.9 bits (64), Expect = 0.089
 Identities = 24/122 (19%), Positives = 58/122 (47%)
 Frame = -2

Query: 562 RQPQVQRKLQRERSP*RQQARSTSQLRV*RGRSMRRWLEHREQSMSRKMVIHERLWTSKK 383
           +Q Q Q++ +R   P  +Q R   Q +  + +  ++  + +++   R+    ++    ++
Sbjct: 286 QQQQQQQQGERYVPPQLRQQRQQQQHQQ-QQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQ 344

Query: 382 ILRKQLEKWSWSQPEMQHKRTMVQWRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRR 203
             R+Q ++    Q + QH++   QW+     Q         H+++ + Q S  RL+Q ++
Sbjct: 345 QQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQ-QQPRQSLPHRKQTQLQLS-PRLQQQQQ 402

Query: 202 QR 197
           Q+
Sbjct: 403 QQ 404



 Score = 27.9 bits (59), Expect = 0.36
 Identities = 30/148 (20%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
 Frame = -2

Query: 562 RQPQVQRKLQRERS-----P*RQQARSTSQLRV*RGRSMRRWLEHREQSMSRKMV---IH 407
           RQPQ Q++ Q+++      P  +Q R   Q    R R  ++  + ++Q    + V   + 
Sbjct: 248 RQPQQQQQQQQQQGERYVPPQLRQQRQQQQ----RPRQQQQQQQQQQQQQGERYVPPQLR 303

Query: 406 ERLWTSKKILRKQLEKWSWSQPEMQHKRTMVQWRTNMLGQ*HMSMLVQQHKRRQEQQWS* 227
           ++    +   ++Q ++    Q + Q +R   Q +     Q       Q+ +++Q+QQ   
Sbjct: 304 QQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQ 363

Query: 226 *RLEQHRRQRCGHRERCELSKKRPKTQL 143
            + +Q ++Q+   ++  +    R +TQL
Sbjct: 364 QQQQQWQQQQQQQQQPRQSLPHRKQTQL 391


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 36.7 bits (81), Expect = 8e-04
 Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
 Frame = -2

Query: 469 RSMRRWLEHREQSMSRKMVIHERLWTSKKILRKQLEKWSWSQPEMQHKRTMVQWRTNMLG 290
           R  ++  + REQ   ++    ++    ++  R Q  +W   Q + QH++   Q +  +  
Sbjct: 223 RQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQ 282

Query: 289 Q*HMSMLVQQHKRRQEQQWS**RLEQHRRQRCGHRERCEL----SKKRPKTQLD*WF*LP 122
           Q       QQH+R+Q+QQ       Q +RQ+   +E+ EL     ++R  TQ       P
Sbjct: 283 Q------NQQHQRQQQQQ-------QQQRQQQQQQEQQELWTTVVRRRQNTQQQQQSNQP 329

Query: 121 QQEPR*CGCKPREQLRGDHQRGLRLQRTEQR 29
           QQ+ +  G     Q+R   Q+  + QR  QR
Sbjct: 330 QQQQQQTGRYQPPQMRQQLQQ-QQQQRQPQR 359


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 30.7 bits (66), Expect = 0.051
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -2

Query: 631 KNHHGLW*RSKMTQKILQD*WSWRQPQV--QRKLQRERSP*RQQARSTSQLRV*RGRSMR 458
           +NH     +S   Q+  Q   S +Q Q+  Q++ QR+R P  QQ  S+SQ RV    + R
Sbjct: 229 QNHQQTAQQSSQQQQQQQQQQSLQQQQLSQQQQQQRQRQPSSQQGDSSSQRRV--RHAGR 286

Query: 457 RW 452
           RW
Sbjct: 287 RW 288


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -2

Query: 442 REQSMSRKMVIHERLWTSKKILRKQLEKWSWSQPEMQHKRTM--VQWRT 302
           REQ + R+M   +R    +++  +Q ++W   Q + Q ++ +   QW T
Sbjct: 166 REQELLRRMESQQRQEQRQQLEDQQRQRWRQQQQKQQRQQRLPAQQWPT 214


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 354  DHFSSCFLSIFLLVHNRSWITIFRDILCSR 443
            DH    +L +F +   + WI I  D + SR
Sbjct: 1497 DHVGKAYLCLFQVATFKGWIQIMNDAIDSR 1526


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 135 HQSSCVFGLFLLNSHRSR 188
           H  SC+FG FL N+ + R
Sbjct: 514 HSHSCLFGTFLCNTVKER 531


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 135 HQSSCVFGLFLLNSHRSR 188
           H  SC+FG FL N+ + R
Sbjct: 514 HSHSCLFGTFLCNTVKER 531


>EF519475-1|ABP73559.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 127 LPQQEPR*CGCKPREQ 80
           +PQQ P  C CKP E+
Sbjct: 19  IPQQNPCLCPCKPFEE 34


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 336  ISGCDQDHFSSCF 374
            ISG  +DH+SSC+
Sbjct: 3110 ISGITEDHYSSCY 3122


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -2

Query: 343  PEMQHKRTM---VQWRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRRQRCGHRERCE 173
            P  QH +     +Q     L   +   L QQ +++Q+QQ    + +QH++ +  H  + +
Sbjct: 1281 PTHQHSQIQLQPIQQPLQTLQHQYQQQLQQQQQQQQQQQQ---QHQQHQQHQLQHHHQPQ 1337

Query: 172  LSK 164
            LS+
Sbjct: 1338 LSQ 1340


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,390
Number of Sequences: 2352
Number of extensions: 10278
Number of successful extensions: 99
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)