Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1529
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...    28   0.27 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   5.9  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   7.8  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +3

Query: 48  KCRTKMASQVAKSLIKANHVRSTVKFDTARRALSVAPVLQQK 173
           + RTK   + +K +I+  + R T+ FDT +R +    ++  K
Sbjct: 3   RVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTK 44


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 466 EEMQAMVTVCAGVLSLNPAARAASRPIF 383
           E  QA+   C G +   P  R   RP++
Sbjct: 261 ELTQAITVACDGTMPRQPPRRQGRRPVY 288


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 16/71 (22%), Positives = 27/71 (38%)
 Frame = -3

Query: 415 PAARAASRPIFEVFTSWITVPYTM*SMTSFDIPVFCRRPRSACLASSWGIILA*SVNETR 236
           PA +     ++ ++    T P T  + T+   P    R R      SW  ++      T+
Sbjct: 653 PAKKEPESVVYPIYRR--TTPTTTTTTTASPAPAPAIRSRFGDNRPSWRPLIVPHATTTK 710

Query: 235 NGVRTPSTSTT 203
               TP  +TT
Sbjct: 711 TPTTTPPATTT 721


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,048
Number of Sequences: 2352
Number of extensions: 17747
Number of successful extensions: 42
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)