Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1529
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    26   0.44 
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   4.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.4  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   9.4  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 610 PRPRRRGYRSLPSSDRTSSLPSC 678
           P P  +G R  P S R  SLP C
Sbjct: 58  PGPGSKGPRDFPRSHRFKSLPRC 80


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 483 TGIGMIAAGAYDVIVAGGVEFMSDVPIRHSRKMRSLLLRINRAKTPAQRL 632
           T IG+     +D    GG+E +S +  +      S+L+  N A   A  +
Sbjct: 113 TAIGLSLIKGFDKKQGGGIELISHIISKQLHIPVSVLMGANLASEVANEM 162


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 121 LTVDRTWFAFINDLATCEAILVRHFGQF 38
           L   R+ F  +ND    + IL+R F +F
Sbjct: 75  LYATRSPFLLLNDPELIKDILIRDFSKF 102


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +1

Query: 733  WRPPSEP 753
            WRPPS+P
Sbjct: 1200 WRPPSQP 1206


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 560 GHVRHELHSARHDDVIRAGRDHTDTS 483
           G +R    S+ HD VI  G +  DTS
Sbjct: 249 GTIRKCDESSPHDQVIIGGSNGLDTS 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,012
Number of Sequences: 438
Number of extensions: 4728
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)