Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1528
         (566 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    25   2.3  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   6.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.9  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   9.2  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   9.2  
AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450 CY...    23   9.2  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 223 AQDESRNSIDENKEKDHDNASSASTVEVLDDK 318
           A++ +++  DE+ E D DNA      E LDD+
Sbjct: 371 AEEAAKDDEDEDDEDDADNALPGEATE-LDDE 401


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 530 CIIQCRYCD 556
           CII C YCD
Sbjct: 28  CIISCAYCD 36


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +1

Query: 130  ITQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSASTVEVL 309
            +   E + +E N   +RT  TD+   NSS       R++  E +E+         TV +L
Sbjct: 1675 VALQEILYDELNRPAVRTKWTDLDTTNSS--ILFSYRHNFIEKEERFWKTGQMEGTVTLL 1732

Query: 310  D 312
            +
Sbjct: 1733 N 1733


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +1

Query: 130  ITQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSASTVEVL 309
            +   E + +E N   +RT  TD+   NSS       R++  E +E+         TV +L
Sbjct: 1676 VALQEILYDELNRPAVRTKWTDLDTTNSS--ILFSYRHNFIEKEERFWKTGQMEGTVTLL 1733

Query: 310  D 312
            +
Sbjct: 1734 N 1734


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 13/51 (25%), Positives = 20/51 (39%)
 Frame = +1

Query: 160 TNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSASTVEVLD 312
           T  E I   + D       +D +DE      E  E+D D+  +A  +   D
Sbjct: 466 TFEEEIYKGEEDYEGEEDEEDEEDEYEGDDTEEDEEDEDDELAAGPLGTSD 516


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 9/46 (19%), Positives = 24/46 (52%)
 Frame = -3

Query: 267 FFFVLVYTISRFILSILA*IHVRNVSF*CSNPFIVRLLSHRLTLSY 130
           F  + +  ++ F+   ++  H   +SF  S+  +  +L+H++  S+
Sbjct: 206 FLTITILLLATFVFVSVSMGHAYRISFIESSATVQNILTHKIVCSW 251


>AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450
           CYP6Z1 protein.
          Length = 494

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 379 KIILINFFAHIFERNLFC 432
           K I++N F H  +R ++C
Sbjct: 86  KRIMVNDFQHFHDRGVYC 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,762
Number of Sequences: 2352
Number of extensions: 10572
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)