Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1528
(566 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr... 29 2.3
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical ... 29 2.3
U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical pr... 29 3.1
U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical p... 29 3.1
U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical p... 29 3.1
U00044-7|AAA50675.1| 990|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical pr... 28 4.1
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 28 4.1
AF038606-1|AAB92025.1| 59|Caenorhabditis elegans Hypothetical ... 28 4.1
AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical... 28 4.1
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 28 5.4
U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical pr... 28 5.4
U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1... 28 5.4
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 28 5.4
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 28 5.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 5.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 5.4
AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR... 28 5.4
AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein. 28 5.4
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 27 7.1
U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical pr... 27 7.1
U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical pr... 27 7.1
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 27 7.1
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 27 7.1
AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear recep... 27 7.1
Z92782-2|CAB07188.1| 331|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z69646-6|CAD44142.1| 287|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z69646-5|CAA93474.1| 288|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z49909-3|CAA90107.2| 603|Caenorhabditis elegans Hypothetical pr... 27 9.4
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 27 9.4
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical protein
C44H9.4 protein.
Length = 1099
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +1
Query: 97 KMGNIKCKRVKITQSEPVAEETNNERI-RTLKTDVSDVNSSKDAQDE---SRNSIDENKE 264
+M IKC K + + E + I +T+KT SSK Q +RN+I +N
Sbjct: 1026 QMVQIKCTAKKSNKIQKNQNEGKHISISQTVKTKEDTEQSSKPQQRRRRRNRNNIGQNST 1085
Query: 265 KDHDNASSASTV 300
N++++ST+
Sbjct: 1086 NGRKNSATSSTI 1097
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 124 VKITQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKE 264
VKI QS+ ++ E + DVSD + +D +DES S DE+ +
Sbjct: 862 VKIRQSKKSVKKEEEE-----EEDVSDESDDEDIEDESAGSDDEDSD 903
>AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical
protein Y39A1A.12 protein.
Length = 636
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Frame = +1
Query: 109 IKCKRVKIT---QSEPVAEETNNERIR-----TLKTDVSDVNSSKDA--QDESRNSIDEN 258
+K + +IT +S P + ++ R+R T K+D S +SS D+ +DE + DE
Sbjct: 17 VKRRSTRITNLPKSAPKIVKRSSVRLRGAPQCTYKSDSSSSSSSSDSDGEDEYAATKDEL 76
Query: 259 KEKDHDN 279
K DHDN
Sbjct: 77 KAVDHDN 83
>U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical
protein K02B2.1 protein.
Length = 457
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/78 (19%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +1
Query: 91 FCKMGNIKCKRVKITQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEK- 267
FCK ++C ++ +P + N ++ D + +++ A+++ N I+ K++
Sbjct: 139 FCKKQRLRCFFIESVCDDPAIIDCNVTDVKVNSPDYKGLMTAEQAKEDFMNRIENYKKQY 198
Query: 268 ---DHDNASSASTVEVLD 312
D S S ++V++
Sbjct: 199 EPLDESEDESLSFIKVIN 216
>U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical
protein F42G9.1b protein.
Length = 469
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/74 (21%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 97 KMGNIKCKRVKI-TQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDH 273
K G +C++ I ++++ ET+ E + + V V + ++ +D+S ++E+D
Sbjct: 200 KKGQKRCQKSPIQSEAKKSKSETDAETAPSSSSGVDGVATEEEDEDDSDKEFVADEEEDD 259
Query: 274 DNASSASTVEVLDD 315
++A + E + D
Sbjct: 260 EDAEDEQSDEEMVD 273
>U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical
protein F42G9.1a protein.
Length = 491
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/74 (21%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 97 KMGNIKCKRVKI-TQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDH 273
K G +C++ I ++++ ET+ E + + V V + ++ +D+S ++E+D
Sbjct: 222 KKGQKRCQKSPIQSEAKKSKSETDAETAPSSSSGVDGVATEEEDEDDSDKEFVADEEEDD 281
Query: 274 DNASSASTVEVLDD 315
++A + E + D
Sbjct: 282 EDAEDEQSDEEMVD 295
>U00044-7|AAA50675.1| 990|Caenorhabditis elegans Hypothetical
protein K04C2.2 protein.
Length = 990
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 193 DVSDVNSSKDAQDESRNSIDENKEKDHDNASSASTVEVLD 312
D S++ S + DE+ +S D+++E+D D + A E+LD
Sbjct: 597 DESEIPSG-NGDDEASDSDDDDEEEDDDEGNEAVDQELLD 635
>Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical
protein ZK945.3 protein.
Length = 766
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 112 KCKRVKITQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDN 279
K K VK+ Q E EE + + +K + +S+ A DE+ S+DE D +
Sbjct: 145 KVKTVKVAQEEE--EEHSAPPKKKVKVNAEKAVASEPADDENLESVDEQAGGDESH 198
>Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical
protein F59B2.12 protein.
Length = 918
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 151 AEETNNERIRTLKT-DVSDVNSSKDAQDESRNSIDENKEKDH 273
AE NN TL + D + SS ++ S S+DEN K H
Sbjct: 409 AESRNNTAADTLDSVDANGTVSSSHSKSASGTSLDENHNKTH 450
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +1
Query: 136 QSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSASTVE 303
+SE +NNE T + V+D SK+A+ + ++ EK+ ++ ++ ++ E
Sbjct: 194 ESESGTTVSNNEETTTTENKVADEAPSKEAESIQASQDSDHVEKEGESETTTTSDE 249
>AF038606-1|AAB92025.1| 59|Caenorhabditis elegans Hypothetical
protein C04C3.4 protein.
Length = 59
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 404 HTFSNAIYFVSANLLFSKQNIFRFSKVTINL 496
H +N+ F+ + +F+KQN+++F IN+
Sbjct: 29 HRINNSTKFIFSFFMFNKQNLWQFFSFCINI 59
>AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical
protein F41E6.12 protein.
Length = 304
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 321 KCFKNVDVFKKSIQQF*RPKDYFN*FFCTHFRT 419
KC + +K F PKD FN CTHF T
Sbjct: 263 KCEDVLPEARKVCNPFPNPKDTFNLLRCTHFLT 295
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +1
Query: 100 MGNIKCKRVKITQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDN 279
M +K +R + EE + K ++ KDA+DE + + K+KD ++
Sbjct: 387 MSTLKMERDERRTKRKEEEEKKKKDAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAED 446
>U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical
protein ZC196.4 protein.
Length = 468
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 133 TQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRN-SIDENKEKDHDNASSASTVE 303
T+ P+ E+ N + K+ +++ S D QDES+N S++ + N + T+E
Sbjct: 68 TEEVPLDEQINISFVNCTKS--TEMQISLDLQDESKNISVETELQDSSSNEKTELTIE 123
>U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1,
isoform c protein.
Length = 942
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 500 IEDLW-LLWKNEIYFVLKITNLH*QNRLRSKMCAK 399
I D W ++W+ E Y ++ + NL +NR + CAK
Sbjct: 871 IGDFWRMVWEQESYLIVMVANLTEKNR---QQCAK 902
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 500 IEDLW-LLWKNEIYFVLKITNLH*QNRLRSKMCAK 399
I D W ++W+ E Y ++ + NL +NR + CAK
Sbjct: 871 IGDFWRMVWEQESYLIVMVANLTEKNR---QQCAK 902
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 500 IEDLW-LLWKNEIYFVLKITNLH*QNRLRSKMCAK 399
I D W ++W+ E Y ++ + NL +NR + CAK
Sbjct: 906 IGDFWRMVWEQESYLIVMVANLTEKNR---QQCAK 937
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +1
Query: 139 SEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSASTVEVLDD 315
+EP A+ET ++I KT+ SD + S+ + +S + + KE+D + S +++ +
Sbjct: 13147 TEP-ADETPKKKIIKKKTEKSDSSISQKSATDS-EKVSKQKEQDEPTKPAVSETQMVTE 13203
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +1
Query: 139 SEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSASTVEVLDD 315
+EP A+ET ++I KT+ SD + S+ + +S + + KE+D + S +++ +
Sbjct: 13147 TEP-ADETPKKKIIKKKTEKSDSSISQKSATDS-EKVSKQKEQDEPTKPAVSETQMVTE 13203
>AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR-1
protein.
Length = 942
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 500 IEDLW-LLWKNEIYFVLKITNLH*QNRLRSKMCAK 399
I D W ++W+ E Y ++ + NL +NR + CAK
Sbjct: 871 IGDFWRMVWEQESYLIVMVANLTEKNR---QQCAK 902
>AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein.
Length = 1409
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 500 IEDLW-LLWKNEIYFVLKITNLH*QNRLRSKMCAK 399
I D W ++W+ E Y ++ + NL +NR + CAK
Sbjct: 871 IGDFWRMVWEQESYLIVMVANLTEKNR---QQCAK 902
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 127 KITQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNA 282
+ QSE V E N + + D D++S E + +DE K +++A
Sbjct: 166 RAVQSERVEREQNGSPNQIEEDDYKDLSSPDTCSVEIQTDVDEQKPSSNNSA 217
>U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical
protein K03A1.2b protein.
Length = 584
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 118 KRVKITQSE-PVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSAS 294
K+VK+ ++E A++ ++E ++L D D QD+ + + K+K H +
Sbjct: 36 KKVKVKKAELTAAQDEDDEGSKSLDEVEEDAGIDDDEQDDDEDVKEVPKKKSHVKQKKSK 95
Query: 295 TVEVLDDK 318
DK
Sbjct: 96 KPPAKKDK 103
>U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical
protein K03A1.2a protein.
Length = 586
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 118 KRVKITQSE-PVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSAS 294
K+VK+ ++E A++ ++E ++L D D QD+ + + K+K H +
Sbjct: 36 KKVKVKKAELTAAQDEDDEGSKSLDEVEEDAGIDDDEQDDDEDVKEVPKKKSHVKQKKSK 95
Query: 295 TVEVLDDK 318
DK
Sbjct: 96 KPPAKKDK 103
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 127 KITQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNA 282
+ QSE V E N + + D D++S E + +DE K +++A
Sbjct: 166 RAVQSERVEREQNGSPNQIEEDDYKDLSSPDTCSVEIQTDVDEQKPSSNNSA 217
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 127 KITQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNA 282
+ QSE V E N + + D D++S E + +DE K +++A
Sbjct: 140 RAVQSERVEREQNGSPNQIEEDDYKDLSSPDTCSVEIQTDVDEQKPSSNNSA 191
>AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 454
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 127 KITQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNA 282
+ QSE V E N + + D D++S E + +DE K +++A
Sbjct: 105 RAVQSERVEREQNGSPNQIEEDDYKDLSSPDTCSVEIQTDVDEQKPSSNNSA 156
>Z92782-2|CAB07188.1| 331|Caenorhabditis elegans Hypothetical
protein F14F8.3 protein.
Length = 331
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 376 PKIILINFFAHIFERNLFC*CKFVIFKTKYISFFQSNH 489
P ++ I FAH+ + F++++T +IS +S+H
Sbjct: 207 PMVMKIRSFAHLASSRTYQPQNFILYQTLFISGSKSSH 244
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 175 IRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSASTVEVLD 312
+ TLK + D + K AQD ++S++E K+ D + EVL+
Sbjct: 816 VDTLKLKIED--TEKSAQDLQQSSVEEIKQLQLDLQNFKQNAEVLE 859
>Z69646-6|CAD44142.1| 287|Caenorhabditis elegans Hypothetical
protein F57C7.3b protein.
Length = 287
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +1
Query: 163 NNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSAST 297
N++ I+ + + D + +D +D+ + DEN D D ++ +T
Sbjct: 134 NDKEIKVEEDEDDDEDEDEDDEDDEEDFADENIHNDEDFFTTTTT 178
>Z69646-5|CAA93474.1| 288|Caenorhabditis elegans Hypothetical
protein F57C7.3a protein.
Length = 288
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +1
Query: 163 NNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSAST 297
N++ I+ + + D + +D +D+ + DEN D D ++ +T
Sbjct: 135 NDKEIKVEEDEDDDEDEDEDDEDDEEDFADENIHNDEDFFTTTTT 179
>Z49909-3|CAA90107.2| 603|Caenorhabditis elegans Hypothetical
protein C14A4.3 protein.
Length = 603
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 356 YSAILKTQRLF*LIFLHTFSNAIYFVSANLLF-SKQNIFRFSKVTINLLCIMISAYQFEC 532
YS + + F I+LH +++ ANL +K +F ++TI L C++ Y F+
Sbjct: 100 YSPVYAIRSYF-YIYLHYIPASLF---ANLFGDTKIVVFTLIRLTIGLFCLLGEYYAFDA 155
Query: 533 IIQCRYCDLA 562
I C+ ++A
Sbjct: 156 I--CKKINIA 163
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +1
Query: 151 AEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSASTVEVLDDK*SVL 330
+++T + L+ + DV S + DE ++ + ++ + +V +LDD SVL
Sbjct: 1637 SDDTEEMLVHNLQRSIFDVGKSFEDDDEDDTNVIKLDTNTDNHRPATPSVGILDDLNSVL 1696
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +1
Query: 31 LSKLIN-TVILLNWL*TKA*KFCKMGNIKCKRVKITQSEPVAEETNNERIRTLKTDVSDV 207
L +L++ T L N T+ + N+K RVK+ +P+ ++ ++ ++ + + D
Sbjct: 493 LQRLLDVTYFLDNCCETRKHTDTMLSNVKSSRVKLEIVQPIKDQLDSLKVEMVDMMLDDQ 552
Query: 208 NSSKDAQDESRNSIDENKEKDHDNASSASTVE 303
+ A +E R + + K+ + + AS E
Sbjct: 553 QKNM-ANEELRKTYENLKKIEMEVGRQASQKE 583
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,907,289
Number of Sequences: 27780
Number of extensions: 237822
Number of successful extensions: 915
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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