Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1527
         (668 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22175-2|CAA80131.2|  520|Caenorhabditis elegans Hypothetical pr...    62   3e-10
Z11115-20|CAA77460.2|  520|Caenorhabditis elegans Hypothetical p...    62   3e-10
Z92807-5|CAB07265.1|  480|Caenorhabditis elegans Hypothetical pr...    40   0.001
AL021482-5|CAA16342.1|  480|Caenorhabditis elegans Hypothetical ...    40   0.001
Z74038-8|CAD21642.1|  540|Caenorhabditis elegans Hypothetical pr...    35   0.045
Z72507-16|CAC35887.1|  540|Caenorhabditis elegans Hypothetical p...    35   0.045
AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical...    34   0.10 
U12965-7|AAY86205.1|  528|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U40954-8|AAM69083.2|  471|Caenorhabditis elegans Hypothetical pr...    29   3.9  

>Z22175-2|CAA80131.2|  520|Caenorhabditis elegans Hypothetical
           protein ZK637.1 protein.
          Length = 520

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 36/134 (26%), Positives = 59/134 (44%)
 Frame = +3

Query: 174 TEEMADYETALDKAGYGRFSRSALGACVCAFFASGVQNCIMSYVLPAARCELQLTTYQAG 353
           +E+    + A++  G+GRF          A+ A  ++  ++S + PA  CE  +++ Q  
Sbjct: 63  SEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQA 122

Query: 354 LINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXXXXXXXXXXQSTVPDYRLLLAARTIN 533
           L+     SG + S+ FWG + D FGR+                    P + +LL  R + 
Sbjct: 123 LVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLT 182

Query: 534 GFIIGGPATLVFTY 575
           GF IGG    V  Y
Sbjct: 183 GFGIGGVPQSVTLY 196


>Z11115-20|CAA77460.2|  520|Caenorhabditis elegans Hypothetical
           protein ZK637.1 protein.
          Length = 520

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 36/134 (26%), Positives = 59/134 (44%)
 Frame = +3

Query: 174 TEEMADYETALDKAGYGRFSRSALGACVCAFFASGVQNCIMSYVLPAARCELQLTTYQAG 353
           +E+    + A++  G+GRF          A+ A  ++  ++S + PA  CE  +++ Q  
Sbjct: 63  SEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQA 122

Query: 354 LINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXXXXXXXXXXQSTVPDYRLLLAARTIN 533
           L+     SG + S+ FWG + D FGR+                    P + +LL  R + 
Sbjct: 123 LVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLT 182

Query: 534 GFIIGGPATLVFTY 575
           GF IGG    V  Y
Sbjct: 183 GFGIGGVPQSVTLY 196


>Z92807-5|CAB07265.1|  480|Caenorhabditis elegans Hypothetical
           protein K11D9.3 protein.
          Length = 480

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 22/90 (24%), Positives = 39/90 (43%)
 Frame = +3

Query: 336 TTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXXXXXXXXXXQSTVPDYRLLL 515
           + Y   L +    +G +   F +G V DV GRK                    P+Y++LL
Sbjct: 80  SAYLKSLFSQIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLL 139

Query: 516 AARTINGFIIGGPATLVFTYLSDLVGVKKR 605
             R   G  +GG   +V T++ +++  ++R
Sbjct: 140 GIRFFLGLSVGGTLVVVCTFVMEMLLPQQR 169


>AL021482-5|CAA16342.1|  480|Caenorhabditis elegans Hypothetical
           protein K11D9.3 protein.
          Length = 480

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 22/90 (24%), Positives = 39/90 (43%)
 Frame = +3

Query: 336 TTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXXXXXXXXXXQSTVPDYRLLL 515
           + Y   L +    +G +   F +G V DV GRK                    P+Y++LL
Sbjct: 80  SAYLKSLFSQIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLL 139

Query: 516 AARTINGFIIGGPATLVFTYLSDLVGVKKR 605
             R   G  +GG   +V T++ +++  ++R
Sbjct: 140 GIRFFLGLSVGGTLVVVCTFVMEMLLPQQR 169


>Z74038-8|CAD21642.1|  540|Caenorhabditis elegans Hypothetical
           protein F17C11.12 protein.
          Length = 540

 Score = 35.1 bits (77), Expect = 0.045
 Identities = 20/88 (22%), Positives = 37/88 (42%)
 Frame = +3

Query: 372 MSGGVASAFFWGIVGDVFGRKSXXXXXXXXXXXXXXXQSTVPDYRLLLAARTINGFIIGG 551
           M G +     +G +GD +GRK+                +   D++     RTI  F  GG
Sbjct: 131 MLGVMLGCVVFGQIGDQYGRKTPMMFCLCMCFIFGIMSALSADFKKFTIFRTILCFFNGG 190

Query: 552 PATLVFTYLSDLVGVKKRQFYLTMVGMS 635
            +T+   Y+ + +  + R +  T++  S
Sbjct: 191 QSTISVVYMIENIPKRTRGYISTLISYS 218


>Z72507-16|CAC35887.1|  540|Caenorhabditis elegans Hypothetical
           protein F17C11.12 protein.
          Length = 540

 Score = 35.1 bits (77), Expect = 0.045
 Identities = 20/88 (22%), Positives = 37/88 (42%)
 Frame = +3

Query: 372 MSGGVASAFFWGIVGDVFGRKSXXXXXXXXXXXXXXXQSTVPDYRLLLAARTINGFIIGG 551
           M G +     +G +GD +GRK+                +   D++     RTI  F  GG
Sbjct: 131 MLGVMLGCVVFGQIGDQYGRKTPMMFCLCMCFIFGIMSALSADFKKFTIFRTILCFFNGG 190

Query: 552 PATLVFTYLSDLVGVKKRQFYLTMVGMS 635
            +T+   Y+ + +  + R +  T++  S
Sbjct: 191 QSTISVVYMIENIPKRTRGYISTLISYS 218


>AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.16a protein.
          Length = 575

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 25/101 (24%), Positives = 39/101 (38%)
 Frame = +3

Query: 357 INMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXXXXXXXXXXQSTVPDYRLLLAARTING 536
           I  A+  G +A +  +G++GD  GRK                 +  P + L   AR   G
Sbjct: 136 IQAAYYVGQMAGSTTFGMLGDRIGRKKVFFLAIVIQITCAYLIAIAPYWWLYALARAGTG 195

Query: 537 FIIGGPATLVFTYLSDLVGVKKRQFYLTMVGMSFVAAWLLL 659
           F   G   +      +LVG K R+    + G+ F    + L
Sbjct: 196 FSHPGIFVIAVVIGMELVGPKYRKLASVITGLFFALGQIFL 236


>U12965-7|AAY86205.1|  528|Caenorhabditis elegans Hypothetical
           protein F23F12.13 protein.
          Length = 528

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/90 (22%), Positives = 33/90 (36%)
 Frame = +3

Query: 342 YQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXXXXXXXXXXQSTVPDYRLLLAA 521
           Y A  +      G +  A  +G +GD FGRK                    P + +  A 
Sbjct: 94  YDAAWVATIQFIGVLIGAITYGHLGDHFGRKPVSFFGISVGILFGVASGFAPSWEVFAAF 153

Query: 522 RTINGFIIGGPATLVFTYLSDLVGVKKRQF 611
           R I G  I     + + Y+ + +  ++R F
Sbjct: 154 RFIVGTSIASILIVFYAYILEFIEPEQRVF 183


>U40954-8|AAM69083.2|  471|Caenorhabditis elegans Hypothetical
           protein ZK813.5 protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
 Frame = +2

Query: 380 WCRQCILLGYSGRCLRQEEHPKLDVAPGCSDNFSPKHRSRLQTSAGS*NHQWVHYRRS-S 556
           WC           C R  + P +   PG  DN      S + T  G  N   +    S S
Sbjct: 313 WCNDVWTKVKEVMCCRSYDPPTIGHMPGYRDNSDVSPASSVMTVVGGENGPRIKSEASPS 372

Query: 557 YTGLHVFIRPSWS*EETILSY 619
           Y      +RP+W+   ++ SY
Sbjct: 373 YQ-----LRPNWNPSPSVTSY 388


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,343,341
Number of Sequences: 27780
Number of extensions: 362770
Number of successful extensions: 840
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)