Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1521
(758 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 209 3e-55
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 57 3e-09
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 48 1e-06
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 45 1e-05
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 45 1e-05
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 44 2e-05
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 42 1e-04
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 41 2e-04
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 41 2e-04
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 38 0.002
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 37 0.003
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 37 0.004
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 36 0.006
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 33 0.033
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 31 0.18
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 31 0.24
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 29 0.72
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 29 0.95
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.95
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 29 0.95
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 1.3
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 3.8
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 27 3.8
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 26 5.1
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 5.1
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 26 6.7
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 209 bits (511), Expect = 3e-55
Identities = 99/186 (53%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Frame = +3
Query: 204 AVPTESCEFGSPKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVS 383
A P ++ + +P+Y+ TH+A+ PLDL+KCR QV+ Y + GFK
Sbjct: 9 APPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTI 68
Query: 384 VREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASA 563
+ +EG+RGL G PT IGYS+QG K+GFYE+FK Y+ ++ + A+ YRT +YLAASA
Sbjct: 69 LSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSIYLAASA 128
Query: 564 SAEFIADIALSPMEAAKVRIQTM-PGFASTLREAWPKMVKNEGYGTFYKGLVPLWGRQIP 740
SAE +ADI L PMEA KVR+QT P FA+T REAW K+V NEG+GT Y+GL PLW RQIP
Sbjct: 129 SAELLADIMLCPMEAIKVRVQTSNPRFANTTREAWSKIVTNEGFGTLYRGLAPLWFRQIP 188
Query: 741 YTMMKF 758
YTMMKF
Sbjct: 189 YTMMKF 194
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 56.8 bits (131), Expect = 3e-09
Identities = 42/151 (27%), Positives = 73/151 (48%)
Frame = +3
Query: 306 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 485
P+ +VK R+ Y N GF ++ EG+RG G+AP+ +G S QG +F YE
Sbjct: 118 PIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVS-QGALQFMAYEKL 176
Query: 486 KVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAW 665
K L + T ++++ SA+++ A + + P+ + R+Q M ++
Sbjct: 177 K------LWKQRRPTSLDYIFM--SAASKVFAAVNMYPLLVIRTRLQVMRSPHRSIMNLV 228
Query: 666 PKMVKNEGYGTFYKGLVPLWGRQIPYTMMKF 758
+ + +G FYKG +P R +P T + F
Sbjct: 229 LQTWRLQGILGFYKGFLPHLLRVVPQTCITF 259
Score = 31.5 bits (68), Expect = 0.13
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 306 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 479
PL +++ RLQV +++++N + R +G+ G KG+ P + Q F YE
Sbjct: 206 PLLVIRTRLQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHLLRVVPQTCITFLVYE 263
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 48.0 bits (109), Expect = 1e-06
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Frame = +3
Query: 300 VVPLDLVKCRLQ--VDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 473
VVP +L+K RLQ +A KY V+ F V++E + L G+ T + + FG
Sbjct: 122 VVPFELMKIRLQDVKNASKYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGV 181
Query: 474 YEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTL 653
+ + L ++ L A +P + K RIQT+P A +
Sbjct: 182 IQKIR----NSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVPRIAGQV 237
Query: 654 RE---AWPKMV---KNEGYGTFYKGLVP 719
+ A+P +V + EG+ YKG VP
Sbjct: 238 PKYNWAYPALVTVAREEGFTALYKGFVP 265
Score = 37.5 bits (83), Expect = 0.002
Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Frame = +3
Query: 306 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 479
PLD+VK R+Q+ K Y + K V+ EG L +G P + + + KF +
Sbjct: 28 PLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASND 87
Query: 480 VFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFA--STL 653
+ + + + + + + + A F + P E K+R+Q + + +
Sbjct: 88 TYSKLWRKVFKRKDS---SPALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASKYNGT 144
Query: 654 REAWPKMVKNEGYGTFYKGL-VPLW 725
+ + K+VK E Y G +W
Sbjct: 145 VDCFTKIVKQERILALYNGFEATMW 169
Score = 35.1 bits (77), Expect = 0.011
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 543 VYLAASASAEFIADIALSPMEAAKVRIQTMPGFA--STLREAWPKMVKNEGYGTFYKGLV 716
V AA A A + L P++ K R+Q G + + + K+VKNEG Y+G++
Sbjct: 10 VTFAAGAVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGIL 69
Query: 717 PLWGRQIPYTMMKF 758
P + P +KF
Sbjct: 70 PPILMEAPKRALKF 83
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 45.2 bits (102), Expect = 1e-05
Identities = 40/159 (25%), Positives = 60/159 (37%), Gaps = 4/159 (2%)
Frame = +3
Query: 291 HTAVVPLDLVKCRLQ----VDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 458
H+ + P+D +K R+Q V N+VN EGV L +G + +G
Sbjct: 34 HSVMYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHA 93
Query: 459 CKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPG 638
F E FK D R A A A I+D ++P + K R+Q
Sbjct: 94 IYFSVLEFFKSKINASPD-------RPLASALAGACAITISDAFMTPFDVIKQRMQLPSR 146
Query: 639 FASTLREAWPKMVKNEGYGTFYKGLVPLWGRQIPYTMMK 755
+ + +NEG G FY IP+T ++
Sbjct: 147 KYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQ 185
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 44.8 bits (101), Expect = 1e-05
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Frame = +3
Query: 351 YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYT 530
Y N + F+ + EG+ +G P+ G G+ +F YE FK LDD
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGI-QFPLYEYFK----SFLDDFFGKK 284
Query: 531 YRTFVYLAASASAEFIADIALSPMEAAKVRIQTM--PGFAST---LREAWPKMVKNEGYG 695
+ LAA+ S + A P E + R+Q++ P S +R+ W ++EG+
Sbjct: 285 SNFHIVLAATLS-KIAASTVTYPHEVLRTRLQSLDAPTHNSATLLIRDIW----RSEGWR 339
Query: 696 TFYKGLVPLWGRQIPYTMMKF 758
+Y G+ + R IP + + F
Sbjct: 340 KYYSGMATNFIRTIPASSVTF 360
Score = 33.9 bits (74), Expect = 0.025
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Frame = +3
Query: 300 VVPLDLVKCRLQVDAEKY-----KN--VVNGFKVSVR----EEGVRGLAKGWAPTFIGYS 446
V PLD+VK R Q Y KN V+ G S+R EG+ GL +G P +GY
Sbjct: 23 VAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYL 82
Query: 447 MQGLCKFGFYEVFKVAY 497
F YE KV +
Sbjct: 83 PSWSIYFVVYEKCKVLF 99
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 633 PGFASTLREAWPKMVKNEGYGTFYKGLVP 719
P + +T +A+ K+ K EG FY+GL P
Sbjct: 228 PAYNNTF-DAFRKIYKYEGLAAFYRGLFP 255
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 44.0 bits (99), Expect = 2e-05
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Frame = +3
Query: 294 TAVVPLDLVKCRLQV-------DAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 446
T P +++K R Q+ D K YK+V F + R EG+RGL +G ++
Sbjct: 39 TLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQI 98
Query: 447 MQGLCKFGFYE-VFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRI 623
C+ GFYE + + LDD + + +A+ A + + SP K R+
Sbjct: 99 CLNGCRLGFYEPIRRTLNTWFLDDPKG--NKLAINVASGAGSGLCGALFGSPFFLVKTRM 156
Query: 624 QT 629
Q+
Sbjct: 157 QS 158
Score = 30.3 bits (65), Expect = 0.31
Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 10/158 (6%)
Frame = +3
Query: 306 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 461
P LVK R+Q + K YK++ N F ++E GV+GL G +
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSV 207
Query: 462 KFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRI--QTMP 635
+ Y K M++ +L ASA + F + + R+ Q
Sbjct: 208 QLPIYNWAK----RMIEHYNLLEEGMIKHLTASAVSGFGVCCTMQIFDTVMTRMYNQKNK 263
Query: 636 GFASTLREAWPKMVKNEGYGTFYKGLVPLWGRQIPYTM 749
+ K +++EG+ YKG R P+T+
Sbjct: 264 ELYKNPIDCILKTIRSEGFFALYKGFGAHLARIAPHTI 301
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 41.5 bits (93), Expect = 1e-04
Identities = 46/159 (28%), Positives = 60/159 (37%), Gaps = 13/159 (8%)
Frame = +3
Query: 309 LDLVKCRLQVD--AEKYKNVVNGFKVSVREEGV-RGLAKGWAPTFIGYSMQGLCKFGFYE 479
LD VK R Q KY +V + + EEGV GL G P IG F YE
Sbjct: 36 LDTVKTRQQAALYTNKYNGMVKCYSTILCEEGVFHGLYSGVCPMLIGSLPATALFFSSYE 95
Query: 480 VFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTM-----PGFA 644
K + T +L A + A + P E K R+Q P F
Sbjct: 96 YTKRHLMSNYN-----LPETLCFLLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNPHFQ 150
Query: 645 S-----TLREAWPKMVKNEGYGTFYKGLVPLWGRQIPYT 746
S + R A ++ K EG TF+ G R IP++
Sbjct: 151 SNYNYPSFRGAVKQIAKQEGMKTFFYGYRATILRDIPFS 189
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 387 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 479
+ EG+ GL +G+ P S Q F FYE
Sbjct: 293 KSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 41.1 bits (92), Expect = 2e-04
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Frame = +3
Query: 231 GSPKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQVDAE--------KYKNVVNGFKVSV 386
G K+FA + V LD + RL DA+ ++ +V+ ++ +
Sbjct: 127 GYAKWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTY 186
Query: 387 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFK-VAYAGMLDDETAYTYRTFVYLAASA 563
R +G+RGL +G+ P+ +G + FG Y+ K V G L+ ++ + +
Sbjct: 187 RSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLEGNFLASF-LLGWAVTTG 245
Query: 564 SAEFIADIALSPMEAAKVRIQTMPGFA---STLREAWPKMVKNEGYGTFYKG 710
S +A P++ + R+ G A S+ E +++ EG +F+KG
Sbjct: 246 SG-----VASYPLDTIRRRMMMTSGEAVKYSSSFECGRQILAKEGARSFFKG 292
Score = 31.1 bits (67), Expect = 0.18
Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 11/159 (6%)
Frame = +3
Query: 180 TGGMAASAAVPTESCEFGSPKY--FAXXXXXXXXXXXXTHTAVVPLDLVKCRLQVDAE-- 347
T AA+A+ P + K F + TA P++ VK +Q E
Sbjct: 3 TSSAAAAASTPVNANTITETKNSTFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMI 62
Query: 348 -------KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGM 506
+YK + FK + EEGV L +G + Y F F + FK + G
Sbjct: 63 RAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GY 121
Query: 507 LDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRI 623
+ Y LA+ +A + + + ++ A+ R+
Sbjct: 122 KKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYARTRL 160
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 40.7 bits (91), Expect = 2e-04
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = +3
Query: 288 THTAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 452
T A P+ LVK RLQ+D A +Y++ ++ ++R EG RGL KG + + +G +
Sbjct: 176 TSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGVG-E 234
Query: 453 GLCKFGFYEVFKVAYA 500
++ YE FK A A
Sbjct: 235 STLQWVLYEKFKHAVA 250
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 348 KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 482
KY ++ FK+ E+G+ GL G + FG YEV
Sbjct: 311 KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSYEV 355
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 288 THTAVV-PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 464
T TA+ P D++K R+Q++ YKN ++ K+ EG RG G+ + S+
Sbjct: 223 TATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGFFLRVLRKSISSTIT 282
Query: 465 FGFYE 479
+ YE
Sbjct: 283 WSVYE 287
Score = 36.3 bits (80), Expect = 0.005
Identities = 28/145 (19%), Positives = 57/145 (39%), Gaps = 7/145 (4%)
Frame = +3
Query: 297 AVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 476
A +P+ ++K R + + Y + + + ++EG+ G +G+ T + + FY
Sbjct: 123 AFMPVTVIKVRYESNLYSYTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFY 182
Query: 477 EVFKVAYAGMLDD-------ETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMP 635
E+ K + D + +R V + + + A +P + K R+Q P
Sbjct: 183 ELSKQNLHKLFDRFSPSSSVQGTVPHRNIVNVMSGLISGATATAITNPFDMLKTRVQLEP 242
Query: 636 GFASTLREAWPKMVKNEGYGTFYKG 710
+ + NEG+ F G
Sbjct: 243 HIYKNFLHSAKLVYANEGFRGFLDG 267
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 37.1 bits (82), Expect = 0.003
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 12/165 (7%)
Frame = +3
Query: 300 VVPLDLVKCRLQVDAEK---YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL-CKF 467
V P++ V+ RLQ+ K Y + K + G+ G+ KG+ PT GL F
Sbjct: 130 VGPVEHVRIRLQIQTGKNVLYHGPWDCIKKISSQYGLSGIMKGYNPT-AAREAHGLGMYF 188
Query: 468 GFYEVF---KVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPG 638
YE +A + D ++ V+ A A + +A P + K +IQT G
Sbjct: 189 LAYEALVKNTMAKHHLTDRSQTPGWKLCVF---GAGAGYAMWLAAYPFDIVKSKIQT-DG 244
Query: 639 FAS--TLREAWP---KMVKNEGYGTFYKGLVPLWGRQIPYTMMKF 758
F S T + +W + G FY+G VP+ R P + F
Sbjct: 245 FLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVTF 289
Score = 31.9 bits (69), Expect = 0.10
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 597 PMEAAKVRIQTMPGFASTLREAWP---KMVKNEGYGTFYKGLV-PLWG 728
P + KVR+Q+ + A K+ KNEG FYKG V PL G
Sbjct: 37 PFDCVKVRLQSQSNVSPIYNNALDCVKKISKNEGLAAFYKGTVLPLLG 84
Score = 31.5 bits (68), Expect = 0.13
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 297 AVVPLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 464
A P D+VK ++Q D YKN K + G+RG +G+ P + +
Sbjct: 229 AAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVT 288
Query: 465 FGFYE 479
F YE
Sbjct: 289 FYVYE 293
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 36.7 bits (81), Expect = 0.004
Identities = 37/154 (24%), Positives = 60/154 (38%)
Frame = +3
Query: 297 AVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 476
++ P+D +K RLQ GF V+ G G+ +G +G + F Y
Sbjct: 99 SLFPIDTLKTRLQAKG--------GF---VKNGGFHGVYRGLGSILVGSAPGASLFFTTY 147
Query: 477 EVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLR 656
E K L +++ +++ E A I P E K R Q G S+
Sbjct: 148 ENMK----SRLSQSGLGLSDPQIHMCSASLGEIAACIVRVPTEVIKQRAQASGGTLSSRN 203
Query: 657 EAWPKMVKNEGYGTFYKGLVPLWGRQIPYTMMKF 758
+ N + FY G R+IP+T+++F
Sbjct: 204 ILQTILKSNNVWRDFYAGYGITIAREIPFTLIQF 237
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 540 FVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEGYGTFYKGL 713
F L A A D++L P++ K R+Q GF VKN G+ Y+GL
Sbjct: 83 FEALGAGICAGLAVDLSLFPIDTLKTRLQAKGGF-----------VKNGGFHGVYRGL 129
Score = 27.5 bits (58), Expect = 2.2
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 576 IADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEGYGTFYKGLVP--LW 725
IA +P + K RI T S + +V +EG+ YKG+VP LW
Sbjct: 271 IAAALTTPFDVVKTRIMTSQQRLSYVFTI-KSIVAHEGFLALYKGIVPRVLW 321
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 35.9 bits (79), Expect = 0.006
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 16/156 (10%)
Frame = +3
Query: 300 VVPLDLVKCRLQVD----AEKYKNVV-NGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 464
+ P+D +K R+Q + K+++ + K + G+RG +G +G
Sbjct: 246 IYPVDTLKFRIQCSDLSRGQHGKSIILSNAKELYKSVGIRGYYRGVLVGILGMFPYSATD 305
Query: 465 FGFYEVFKVAYAGML------DDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQ 626
G +E K + G+L D + V + S A I P+ + R+Q
Sbjct: 306 LGTFEGLKRTWIGILASRDNVDPQDVKLPNGLVMAFGALSGSTGATIVF-PLNVIRTRLQ 364
Query: 627 TM-----PGFASTLREAWPKMVKNEGYGTFYKGLVP 719
T P + + K KNEG+ YKGL P
Sbjct: 365 TQGTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSP 400
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.5 bits (73), Expect = 0.033
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 306 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 485
PLD +K R Q + + + F+ +V+ EG++GL +G I ++ F Y+
Sbjct: 37 PLDSIKVRQQT--YNFPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSL 94
Query: 486 KVAYA 500
K+ +A
Sbjct: 95 KLTFA 99
Score = 32.3 bits (70), Expect = 0.077
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 552 AASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEGYGTFYKGL-VPL 722
+A+ + I+++ P+++ KVR QT F T+R + VKNEG Y+GL +PL
Sbjct: 22 SAALVSSAISNVIGYPLDSIKVRQQTY-NFP-TIRSCFQNAVKNEGLKGLYRGLTLPL 77
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 31.1 bits (67), Expect = 0.18
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 10/138 (7%)
Frame = +3
Query: 363 VNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTF 542
V+G R EGVR L +G P+ +F YE Y+ A
Sbjct: 86 VSGLYQIARHEGVRSLWRGLVPSLTMLLPANTVQFLGYEQLLPLYSDWGFPAAA------ 139
Query: 543 VYLAASASAEFIADIALSPMEAAKVRIQTMPG---------FASTLREAWPKMVKNEGYG 695
A ASA I+ +SP+E + R+Q + G A+ + + M+ +G
Sbjct: 140 --AIAGASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANEVFDGLKLMIHQKGIL 197
Query: 696 TFYKGL-VPLWGRQIPYT 746
+ G+ V LW R +P++
Sbjct: 198 NLWSGVSVTLW-RDVPFS 214
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 30.7 bits (66), Expect = 0.24
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +3
Query: 288 THTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKF 467
T + PLD++K ++ + E Y+ VV +E G+ G KG S+
Sbjct: 181 TAAVLTPLDVIKTQINLRPESYRKVVRRI---YKENGIFGFEKGLGLRVFASSLGLSIYL 237
Query: 468 GFYEVFK 488
G YE K
Sbjct: 238 GTYEHVK 244
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 29.1 bits (62), Expect = 0.72
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 306 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 422
PL+++K R Q+ + +V+N R EG++G +G+
Sbjct: 103 PLEVIKARTQISQKG--SVINTISTLARSEGLKGFYRGY 139
Score = 25.4 bits (53), Expect = 8.9
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 13/78 (16%)
Frame = +3
Query: 294 TAVVPLDLVKCRLQV-------------DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 434
T PLD+VK R QV AEK ++ K+ + GV+G +G
Sbjct: 189 TISTPLDIVKTRYQVATSSAMRKAEYGLQAEKELGILEIAKLLFSKHGVKGFTRGLFTRM 248
Query: 435 IGYSMQGLCKFGFYEVFK 488
G+ +E FK
Sbjct: 249 CYIMPSGMISMSVFESFK 266
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 28.7 bits (61), Expect = 0.95
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 11/156 (7%)
Frame = +3
Query: 294 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM---QGLCK 464
T + ++ + + ++ K F +E+G+RG+ +G + L
Sbjct: 124 TCMKTAEVTRAKQAATGQEVKGTFRVFADLYKEKGIRGINRGVNAVALRQMTNWGSRLAL 183
Query: 465 FGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTM---- 632
F E + G + E T + FV AS SA ++ P+E A+V +Q++
Sbjct: 184 SRFLEKPIRYFTGRTEAEPLTTGQRFV---ASVSAGALS-CWNQPLEVARVEMQSLTKGI 239
Query: 633 ----PGFASTLREAWPKMVKNEGYGTFYKGLVPLWG 728
PG T+ + KN G Y+G VP G
Sbjct: 240 QHSSPGIMQTIMSIY----KNNGIKGLYRGAVPRMG 271
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 28.7 bits (61), Expect = 0.95
Identities = 30/136 (22%), Positives = 54/136 (39%)
Frame = +3
Query: 306 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 485
PLD ++ + A K +++ K E G++G G + I C F FY
Sbjct: 124 PLDTMRTKFASYA-KTPHMLPATKKIYAEAGIKGFFPGLKFSVIQIGPYAGCFFMFYR-- 180
Query: 486 KVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAW 665
A +L T + A A ++ I + P++ +QT P + ++ +
Sbjct: 181 --ASEAVLSPLGLALSSTLSGVIAGAGSKAI----MFPVDTVVKTLQTFPSNYKSFKDCF 234
Query: 666 PKMVKNEGYGTFYKGL 713
+ +N G Y+GL
Sbjct: 235 LSIYRNSGIKGLYRGL 250
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.7 bits (61), Expect = 0.95
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 303 VPLDLVKCRLQVDAEKYK 356
+P+DLV RL++DA++YK
Sbjct: 137 LPVDLVPIRLEIDADRYK 154
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -2
Query: 457 RPCIEYPMKVGA---HPLARPRTPSSRTDTLKPFTT 359
RP E P+ G HPL RP PSS + P++T
Sbjct: 154 RPLPETPVSPGGSLVHPLPRPPLPSSVSSHSSPYST 189
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 366 NGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 473
+ F++ + V G + W P + G+CK GF
Sbjct: 1105 SNFQIPMHVRSVHGWSCQWGPREDSMLLSGICKHGF 1140
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +1
Query: 184 VAWRRLLRYPRSPVN---LDRLNISLFAELVVFCH 279
+AW+ +YP P+ D ++L+AEL++ H
Sbjct: 302 IAWKYFYQYPAPPIGNDIFDLPTLNLYAELLLLDH 336
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 394 SSRTDTLKPFTTFLYFSA--STWRRHFTRSRGTTAVWVRPHDRTPPTP 257
SSR+DT +P SA + W+R R +G+ + PH + P P
Sbjct: 35 SSRSDTWEPPENLSGCSAVLAEWKRRKRRLKGSNSDSDSPHHASNPHP 82
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.2 bits (55), Expect = 5.1
Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Frame = +3
Query: 486 KVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAW 665
K + +++DE+ T VYL + + + A P K+ + +L +++
Sbjct: 3890 KYDFLKIINDESESRMPTIVYLMENCEIDSLLQNAKIPQNIKKLTVSLGSAENESLADSY 3949
Query: 666 PKMVKNEGYGTFYKG--LVPLWGRQIPYTM 749
K+ E F L W ++P M
Sbjct: 3950 LKLASTEPLWLFINNIHLSTPWAEKLPSKM 3979
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 294 TAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 437
T P D+++ R QV+ YKN+ + + EG+ G +G++ +
Sbjct: 242 TLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNML 294
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,062,318
Number of Sequences: 5004
Number of extensions: 61205
Number of successful extensions: 236
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -