Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1519
(380 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0496 + 4319646-4320371,4321007-4321045 29 1.2
01_07_0185 + 41854199-41855069,41855177-41855610 29 1.2
02_02_0204 + 7760171-7760401,7760503-7760697,7760790-7761344 29 1.6
03_05_0744 + 27336697-27337131,27337329-27337787,27340852-273424... 28 2.2
07_03_0161 - 14560287-14560426,14560467-14560707 28 2.9
06_02_0008 - 10552066-10552116,10552224-10552323,10552394-105524... 28 2.9
06_01_0254 + 1898586-1899617 28 2.9
06_03_0265 - 18923597-18924367,18924459-18924704 27 3.8
06_03_0263 - 18910447-18911217,18911311-18911556 27 3.8
06_03_0260 - 18857970-18858737,18858909-18859145 27 3.8
02_02_0216 + 7958881-7959123,7959225-7959422,7959520-7960083 27 3.8
04_03_0098 + 11183039-11183752 27 5.0
03_06_0454 + 34044351-34044499,34045495-34045510,34045640-340458... 27 5.0
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 27 6.6
08_02_0493 - 17770723-17770758,17770772-17770996,17771051-177720... 27 6.6
04_04_0915 - 29385926-29385952,29386069-29386285,29386367-293866... 27 6.6
02_05_0880 + 32466538-32467083,32467333-32467644,32467731-324682... 27 6.6
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 27 6.6
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 27 6.6
12_02_1265 - 27435096-27437675 26 8.7
10_08_0232 - 16053034-16053597 26 8.7
10_01_0046 - 635010-635431,635522-635684,637390-637815 26 8.7
07_01_0633 - 4735298-4735485,4736083-4736114,4736203-4736297,473... 26 8.7
04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,134... 26 8.7
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849... 26 8.7
02_01_0606 + 4543031-4543177,4543287-4543709,4543836-4543952,454... 26 8.7
01_02_0059 - 10701859-10701963,10702034-10702153,10702534-107026... 26 8.7
>08_01_0496 + 4319646-4320371,4321007-4321045
Length = 254
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -3
Query: 306 AAPTRGPPACPDARPQPL*RLFHTTALNA 220
A P PPA DA P P LF TAL+A
Sbjct: 16 AVPPPPPPASGDAAPPPQTTLFKLTALDA 44
>01_07_0185 + 41854199-41855069,41855177-41855610
Length = 434
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -2
Query: 373 QVTCSCVKPKLGRGASL-GGVASRCPHS 293
+ TCS LGRG L GG A CP+S
Sbjct: 88 RATCSSAMRGLGRGLGLRGGAAHACPYS 115
>02_02_0204 + 7760171-7760401,7760503-7760697,7760790-7761344
Length = 326
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Frame = +3
Query: 237 CETVVKVAGDEHLDMLGGPEW----GQREATPP 323
C V+ +A + +++LGGP W G+R+A P
Sbjct: 128 CADVLAIAARDSVNLLGGPSWAVPLGRRDALSP 160
>03_05_0744 +
27336697-27337131,27337329-27337787,27340852-27342418,
27342641-27343044
Length = 954
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 264 DEHLDMLGGPEWGQREATPPRDAPLPS 344
D+ LD+ E G+ +PPR AP PS
Sbjct: 76 DDILDLFRAMEGGEDPGSPPRAAPAPS 102
>07_03_0161 - 14560287-14560426,14560467-14560707
Length = 126
Score = 27.9 bits (59), Expect = 2.9
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 254 SGWGRASGHAGGPRVGAAGGHPP*RRSPAEFWLYTGAGHLH 376
+GW R G AGGP G A S A FW+ G H
Sbjct: 27 AGWPRCCGAAGGPPAGPAARILT-SCSSAYFWIQQWRGGSH 66
>06_02_0008 -
10552066-10552116,10552224-10552323,10552394-10552449,
10553950-10557180
Length = 1145
Score = 27.9 bits (59), Expect = 2.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 321 GGWPPAAPTRGPPACPDARPQPL*RLFHTTALNAVTSVA 205
G WP + G P D+ P+ +++ AL+ V+SVA
Sbjct: 810 GIWPDGSGKPGNPVLQDSHPKRYDVFYYSNALSFVSSVA 848
>06_01_0254 + 1898586-1899617
Length = 343
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2
Query: 245 SRQSGWGRASGHAGGPRVGAAGGHPP*RRSPA 340
S +GW R GG V AGGH RRS A
Sbjct: 141 SPAAGWTRHEYDVGGTNVRVAGGHRFVRRSVA 172
>06_03_0265 - 18923597-18924367,18924459-18924704
Length = 338
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 237 CETVVKVAGDEHLDMLGGPEWG 302
C V+ +A + + MLGGP WG
Sbjct: 131 CADVLALAARDAVAMLGGPSWG 152
>06_03_0263 - 18910447-18911217,18911311-18911556
Length = 338
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 237 CETVVKVAGDEHLDMLGGPEWG 302
C V+ +A + + MLGGP WG
Sbjct: 131 CADVLALAARDAVAMLGGPSWG 152
>06_03_0260 - 18857970-18858737,18858909-18859145
Length = 334
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 237 CETVVKVAGDEHLDMLGGPEWG 302
C V+ +A + + MLGGP WG
Sbjct: 128 CADVLALASRDAVAMLGGPSWG 149
>02_02_0216 + 7958881-7959123,7959225-7959422,7959520-7960083
Length = 334
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Frame = +3
Query: 228 VL*CETVVKVAGDEHLDMLGGPEW----GQREAT 317
V+ C ++ +A E +++LGGP W G+R++T
Sbjct: 130 VVSCADILALAAREGVNLLGGPSWEVPLGRRDST 163
>04_03_0098 + 11183039-11183752
Length = 237
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 263 GRASGHAGGPRVGAAGGHP 319
G A G GG G AGGHP
Sbjct: 219 GSAGGGGGGAGSGGAGGHP 237
>03_06_0454 + 34044351-34044499,34045495-34045510,34045640-34045862,
34045969-34046092,34046168-34046294,34046821-34046882,
34046972-34048023,34048167-34048556,34048667-34052628,
34052710-34052796,34052885-34053004,34053096-34053152
Length = 2122
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 312 ATPPRDAPLPSFGFTQEQVTCIC 380
ATPP + PLPS T+E C
Sbjct: 1139 ATPPDEVPLPSEVMTEEDFRSFC 1161
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 26.6 bits (56), Expect = 6.6
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 10/50 (20%)
Frame = +3
Query: 228 VL*CETVVKVAGDEHLDMLGGPEW----GQREATPP------RDAPLPSF 347
V+ C ++ VA E + LGGP W G+R++T D P P+F
Sbjct: 91 VVSCADILAVAARESVVALGGPTWVVQLGRRDSTTASLDTANNDIPAPTF 140
>08_02_0493 -
17770723-17770758,17770772-17770996,17771051-17772033,
17772196-17772720,17772801-17772990
Length = 652
Score = 26.6 bits (56), Expect = 6.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 269 LVPSHFDDCFTLQHL 225
LV HFDD F LQHL
Sbjct: 620 LVDDHFDDNFLLQHL 634
>04_04_0915 -
29385926-29385952,29386069-29386285,29386367-29386622,
29386745-29387072,29387157-29387587,29388014-29388163,
29388212-29388398,29388709-29388750,29389007-29389555,
29389778-29390032
Length = 813
Score = 26.6 bits (56), Expect = 6.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 260 WGRASGHAGGPRVGAAGG 313
WGR S GG R AGG
Sbjct: 51 WGRRSSEGGGRRASGAGG 68
>02_05_0880 +
32466538-32467083,32467333-32467644,32467731-32468201,
32468481-32469246,32469332-32469774
Length = 845
Score = 26.6 bits (56), Expect = 6.6
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +2
Query: 200 RDATDVTALSAVV*NSRQSGWGRASGHAGGPRVGAAGGHPP 322
RDAT A++ V R G GR GH GGP G P
Sbjct: 95 RDATVFQAVADVSPPGR--GRGRRGGHGGGPGRGKRSATQP 133
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 26.6 bits (56), Expect = 6.6
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 361 SCVKPKLGRGASLGGVASRCPHSGP--PSMSRCS 266
+CV+ L RG L G A+R P G ++RCS
Sbjct: 292 ACVEHHLQRGQGLVGTAARAPGGGRLCADVARCS 325
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 26.6 bits (56), Expect = 6.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -2
Query: 319 GVASRCPHSGPPSMSRCSSPATLTTVSHYST 227
G+A R PHS P SR S YS+
Sbjct: 623 GLAQRFPHSALPKFSRSSGTGQTLLAGRYSS 653
>12_02_1265 - 27435096-27437675
Length = 859
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 355 VKPKLGRGASLGGVA-SRCPHSGPPSMSRCSSPATLTTVSH 236
V+ LG+G S G A S SGPP+M +SP+ + H
Sbjct: 198 VQNNLGKGVSRSGYAKSNQSFSGPPAMV-ANSPSQIKNQRH 237
>10_08_0232 - 16053034-16053597
Length = 187
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 254 SGWGRASGHAGGPRVGAAGGHPP*RRSPAEFWLYTGAGHLH 376
+G +A G GG G AGG+P + A + +G+ LH
Sbjct: 104 AGSSKAGGTGGGDGEGQAGGNPGSKGYGAGSGMGSGSSMLH 144
>10_01_0046 - 635010-635431,635522-635684,637390-637815
Length = 336
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 316 VASRCPHSGPPSMSRCSSPATLTTV-SHYST 227
++ RCP +GPP+ P T T +HY T
Sbjct: 234 LSQRCPPNGPPAALNDLDPTTPDTFDNHYYT 264
>07_01_0633 -
4735298-4735485,4736083-4736114,4736203-4736297,
4736414-4736487,4736682-4736817,4736902-4736965,
4737101-4737166,4737265-4737446,4737824-4737948,
4738031-4738169,4738250-4738369,4738675-4738746,
4738900-4738935,4739633-4739749,4739821-4739953,
4740053-4740156,4740243-4740370,4740880-4741010,
4741561-4741757,4743906-4744583
Length = 938
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 263 GRASGHAGGPRVGAAGGHP 319
GR G AGG G GGHP
Sbjct: 22 GRGRGPAGGRGGGRGGGHP 40
>04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,
1342225-1342799,1343596-1343703,1345823-1346155,
1346783-1349306
Length = 1630
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 269 LVPSHFDDCFTLQHL 225
L+ HFDD F LQHL
Sbjct: 1576 LIDDHFDDNFLLQHL 1590
>02_02_0277 +
8489717-8491468,8491571-8491610,8491719-8491841,
8491959-8492014
Length = 656
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 309 PAAPTRGPPACPDARPQP 256
PAAP PPA P + P P
Sbjct: 85 PAAPRPDPPAAPASSPHP 102
>02_01_0606 +
4543031-4543177,4543287-4543709,4543836-4543952,
4544064-4544423
Length = 348
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 351 SQNSAGERL*GGWPPAAPTRGPPA 280
+QNS G G PP AP PPA
Sbjct: 261 AQNSDGSGKSAGKPPHAPAAAPPA 284
>01_02_0059 -
10701859-10701963,10702034-10702153,10702534-10702609,
10702897-10703276
Length = 226
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 343 LGRGASLGGVASRCPHSGPPSMSRCSSPATLTTVSHY 233
+G G G + + P PP SR SSP L + Y
Sbjct: 24 VGVGGRGGQICRQAPARLPPPSSRASSPVELPRIVPY 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,765,366
Number of Sequences: 37544
Number of extensions: 196691
Number of successful extensions: 1277
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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