Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1518
         (711 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         24   1.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    24   1.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    24   1.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   3.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.8  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +2

Query: 140 VSQPDHVSQFDALINIIKDEISPHVAIVNSQDSLSLKHIVENMVWQLIGNDLKNDE 307
           V+Q D   Q  A + I   E  PHV I +   +     ++ N + +++ ND   D+
Sbjct: 344 VAQSDETLQMIASMKI--KEALPHVPIFDRYINREYILVLSNKMQKMVNNDFNFDD 397


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +2

Query: 140 VSQPDHVSQFDALINIIKDEISPHVAIVNSQDSLSLKHIVENMVWQLIGNDLKNDE 307
           V+Q D   Q  A + I   E  PHV I +   +     ++ N + +++ ND   D+
Sbjct: 344 VAQSDETLQMIASMKI--KEALPHVPIFDRYINREYILVLSNKMQKMVNNDFNFDD 397


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +2

Query: 140 VSQPDHVSQFDALINIIKDEISPHVAIVNSQDSLSLKHIVENMVWQLIGNDLKNDE 307
           V+Q D   Q  A + I   E  PHV I +   +     ++ N + +++ ND   D+
Sbjct: 344 VAQSDETLQMIASMKI--KEALPHVPIFDRYINREYILVLSNKMQKMVNNDFNFDD 397


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 553 PKNKHYGQGRYVRTYY 506
           PK KH    R +R YY
Sbjct: 379 PKEKHVEVARLIRNYY 394


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl
          cyclase beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 32 YSVLLNDIVNYIKQFYGSE 88
          Y ++L ++  YI+Q YG +
Sbjct: 2  YGLILENMSEYIRQVYGED 20


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 553 PKNKHYGQGRYVRTYY 506
           PK KH    R +R YY
Sbjct: 379 PKEKHVEVARLIRNYY 394


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,940
Number of Sequences: 438
Number of extensions: 3806
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)