Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1517
         (530 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128076-1|BAC87261.1|  140|Homo sapiens protein ( Homo sapiens ...    34   0.36 
AY960854-1|AAX59055.1|  579|Homo sapiens keratinocyte proline-ri...    33   0.83 
AL353779-4|CAI20978.1|  579|Homo sapiens keratinocyte proline-ri...    33   0.83 
AK131081-1|BAC85131.1|  440|Homo sapiens FLJ00280 protein protein.     31   2.5  
BC022782-1|AAH22782.1|  780|Homo sapiens bromo adjacent homology...    30   5.8  
AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens ...    30   5.8  
AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein.           30   5.8  
AB023162-1|BAA76789.2|  797|Homo sapiens KIAA0945 protein protein.     30   5.8  
AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein.       29   7.7  
AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein.                29   7.7  
AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isofo...    29   7.7  

>AK128076-1|BAC87261.1|  140|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46197 fis, clone TESTI4007565. ).
          Length = 140

 Score = 33.9 bits (74), Expect = 0.36
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +1

Query: 301 CR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLP 432
           CR  S C  P +   P PG +    P    + PT  RC+  P P
Sbjct: 10  CRLPSCCPCPCKTGDPGPGNRRRATPMWMPKGPTQERCRPYPPP 53


>AY960854-1|AAX59055.1|  579|Homo sapiens keratinocyte proline-rich
           protein protein.
          Length = 579

 Score = 32.7 bits (71), Expect = 0.83
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = +1

Query: 325 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS*RTATLPSRKEGALP 504
           LPR+ + P    +  P  R + R   LPR   C +P  R C          P  +   LP
Sbjct: 423 LPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEPIPLP 482

Query: 505 STCPS 519
           + CPS
Sbjct: 483 APCPS 487


>AL353779-4|CAI20978.1|  579|Homo sapiens keratinocyte proline-rich
           protein protein.
          Length = 579

 Score = 32.7 bits (71), Expect = 0.83
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = +1

Query: 325 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS*RTATLPSRKEGALP 504
           LPR+ + P    +  P  R + R   LPR   C +P  R C          P  +   LP
Sbjct: 423 LPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEPIPLP 482

Query: 505 STCPS 519
           + CPS
Sbjct: 483 APCPS 487


>AK131081-1|BAC85131.1|  440|Homo sapiens FLJ00280 protein protein.
          Length = 440

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 21/60 (35%), Positives = 24/60 (40%)
 Frame = +1

Query: 349 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS*RTATLPSRKEGALPSTCPSRQT 528
           LP     P PR      TLP   T P P      GT     TLP+ +    P T PS +T
Sbjct: 220 LPATGTLPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRT 279


>BC022782-1|AAH22782.1|  780|Homo sapiens bromo adjacent homology
           domain containing 1 protein.
          Length = 780

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +1

Query: 346 PLPGR--KENPLPRESARSPTLPRCQTCPLP 432
           P PGR  +E+P P++    P+ P  Q  PLP
Sbjct: 326 PEPGRPGEESPAPKQELHQPSFPTPQLSPLP 356


>AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens cDNA
            FLJ43332 fis, clone NT2RI3006340, highly  similar to
            Myomesin 1. ).
          Length = 1685

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 328  PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD 444
            P +KA P    K +PL +++ R+P  P C    L S RD
Sbjct: 910  PPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRD 948


>AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein.
          Length = 1685

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 328  PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD 444
            P +KA P    K +PL +++ R+P  P C    L S RD
Sbjct: 910  PPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRD 948


>AB023162-1|BAA76789.2|  797|Homo sapiens KIAA0945 protein protein.
          Length = 797

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +1

Query: 346 PLPGR--KENPLPRESARSPTLPRCQTCPLP 432
           P PGR  +E+P P++    P+ P  Q  PLP
Sbjct: 344 PEPGRPGEESPAPKQELHQPSFPTPQLSPLP 374


>AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein.
          Length = 1450

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 346 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS*RTATLPSRKEGALPSTC 513
           P P  +  P+ R   RSP +P     PLP+  + +G       +P R+   LP TC
Sbjct: 75  PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLP-AAPPIPPRR-SCLPPTC 128


>AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein.
          Length = 1450

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 346 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS*RTATLPSRKEGALPSTC 513
           P P  +  P+ R   RSP +P     PLP+  + +G       +P R+   LP TC
Sbjct: 75  PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLP-AAPPIPPRR-SCLPPTC 128


>AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isoform
           a variant protein.
          Length = 1474

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 346 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS*RTATLPSRKEGALPSTC 513
           P P  +  P+ R   RSP +P     PLP+  + +G       +P R+   LP TC
Sbjct: 110 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLP-AAPPIPPRR-SCLPPTC 163


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,518,324
Number of Sequences: 237096
Number of extensions: 975311
Number of successful extensions: 3176
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3168
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)