Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1516
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 162 4e-41
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 153 3e-38
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 147 1e-36
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 141 1e-34
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 133 2e-32
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 126 4e-30
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 113 3e-26
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 35 0.014
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 34 0.025
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 32 0.10
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 31 0.18
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 30 0.31
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 29 0.54
SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase Alg11|Schiz... 28 1.6
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 27 3.8
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 27 3.8
SPAC1250.04c |atl1||alkyltransferase-like protein Atl1|Schizosac... 27 3.8
SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces pombe... 27 3.8
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 27 3.8
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 26 5.0
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 26 5.0
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 26 5.0
SPAC24C9.12c |||glycine hydroxymethyltransferase |Schizosaccharo... 26 5.0
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 26 6.6
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 25 8.7
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 8.7
SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces po... 25 8.7
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 162 bits (394), Expect = 4e-41
Identities = 77/212 (36%), Positives = 129/212 (60%), Gaps = 5/212 (2%)
Frame = +1
Query: 64 LSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPS--PHNL 237
L+ +VGFDS+ Q+ K I+ GF FN++ +G +G GKSTL+++LF+ + S +
Sbjct: 9 LNNYVGFDSITSQINRKLIRRGFQFNVMVVGPSGSGKSTLINTLFSAHLMDSKGRLDYQA 68
Query: 238 P---TVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAYLQEE 408
P T ++ + + E+ V+L+L + DT GYGDQ+N + ++ ++ YI Q +YL+ E
Sbjct: 69 PYRQTTEIHVTSQVVRENRVQLQLNLIDTPGYGDQINNDKCWEPIIKYIRDQHSSYLRRE 128
Query: 409 LKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTISKTE 588
L R D+R+H CL+FI PTGH L+ ID+ +K+L VN++P+IAK+D+++ E
Sbjct: 129 LNSHRE-KRLQDTRVHCCLFFIRPTGHSLRPIDIAVLKRLTEVVNVVPVIAKSDSLTLEE 187
Query: 589 LQRFKSKIMQELQSNGVEIYQFPVDDESVSEV 684
FK +I +E + + +Y + DD E+
Sbjct: 188 RAAFKQQIREEFVKHDINLYPYDSDDADEEEI 219
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 153 bits (371), Expect = 3e-38
Identities = 84/220 (38%), Positives = 136/220 (61%), Gaps = 13/220 (5%)
Frame = +1
Query: 61 KLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNL- 237
+L+G+VGF SLP+Q + ++ GF FN+L +GE+G GKSTL+++L N + P+ +L
Sbjct: 71 QLNGYVGFASLPNQWHRRCVRQGFNFNVLVLGESGSGKSTLVNTLLNRDVYP-PTQKSLT 129
Query: 238 --------PTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEA 393
PTV + + E+ E+ + L+L + DT G+GD ++ D ++ V+ I+ +++
Sbjct: 130 GDFGVNPEPTVMINSSAVEIVENGISLQLNVIDTPGFGDFIDNTDCWQPVLTDIEGRYDQ 189
Query: 394 YLQEELKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADT 573
YL EL+ S+ D R+H C++FI PTGH + +++L M L KVNIIPIIAKADT
Sbjct: 190 YL--ELEKHNPRSTIQDPRVHACIFFIQPTGHAISAMELRVMLALHEKVNIIPIIAKADT 247
Query: 574 ISKTELQRFKSKIMQELQSNGVEIYQFPV----DDESVSE 681
++ EL K I++++Q + + I+ P D ESV+E
Sbjct: 248 LTDDELNFTKEMILRDIQYHNIRIFFPPTYETDDPESVAE 287
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 147 bits (357), Expect = 1e-36
Identities = 74/203 (36%), Positives = 125/203 (61%), Gaps = 6/203 (2%)
Frame = +1
Query: 76 VGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSP------HNL 237
VG LP+Q +NG F ++ GE+GLGK+T ++LF+T +S P H
Sbjct: 9 VGIADLPNQRHKIVSRNGVAFTLMLCGESGLGKTTFCNTLFSTTIKSHMGPEKVRAKHAE 68
Query: 238 PTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAYLQEELKI 417
TV+++ ELEE N L+LT+ DT G+GD +N +++VV++I+ Q E+Y++++ +
Sbjct: 69 KTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINNSGCWESVVEFIEDQHESYMRQDQQP 128
Query: 418 KRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTISKTELQR 597
R D R+H CLYF+ P +G++ +DL MK + +VN+IP+IAKAD ++ +L
Sbjct: 129 DRR--KIIDMRIHACLYFLRPVRNGVRPMDLEAMKHISKRVNLIPVIAKADMYTRRDLAL 186
Query: 598 FKSKIMQELQSNGVEIYQFPVDD 666
+K++I Q L+ + V +Y+ +D+
Sbjct: 187 YKTRISQVLEYHQVNVYKPNMDE 209
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 141 bits (341), Expect = 1e-34
Identities = 72/219 (32%), Positives = 126/219 (57%), Gaps = 7/219 (3%)
Frame = +1
Query: 46 TLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSL-------FNT 204
T RT G + + L + KS + G N++ +G+ GLG++ +++L N
Sbjct: 24 TARTHITKGQIDIE-LTMRTTKKSSKKGIPLNLMVVGDVGLGRTAFINTLCEKPLIRHNN 82
Query: 205 NFESSPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQ 384
NF+ + + P + T + E ++ LT+ DT +G+ ++ E++F ++ YI++Q
Sbjct: 83 NFDPAEASSVSPVEIVPYQTDIILEDGTKINLTVLDTPHFGEAIDNENNFDIILQYIESQ 142
Query: 385 FEAYLQEELKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAK 564
++ L+EE +IKR+ + + D R+H +YFI PTGHGL+ +D+ M++L +VNIIP IAK
Sbjct: 143 YDNVLEEESRIKRN-ARFCDDRVHALIYFISPTGHGLRELDIELMRRLAPRVNIIPAIAK 201
Query: 565 ADTISKTELQRFKSKIMQELQSNGVEIYQFPVDDESVSE 681
AD+++ ELQ K I +++ + +Y FP D E E
Sbjct: 202 ADSLTAQELQTTKEMINADIEYYKIPVYDFPYDIEEDEE 240
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 133 bits (322), Expect = 2e-32
Identities = 67/217 (30%), Positives = 121/217 (55%)
Frame = +1
Query: 19 DVEPTKAEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLF 198
D P ++ T ++G + Q S+ +NG N++ +GE+ LGK+T ++S
Sbjct: 80 DEVPNSNGKSIPTFHPCNNIGINDFNHQHYSRVCRNGIDINLIVVGESSLGKTTFVNSFL 139
Query: 199 NTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYID 378
+N +++ P T+ H L + + + LTI DT G+GD+ + + ++ + +
Sbjct: 140 QSN-DTNFRPKK--TMDFVEHKATLSDGDQKFNLTIVDTPGFGDKSDNSNCWRPIATNLL 196
Query: 379 AQFEAYLQEELKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPII 558
+ AY Q E+K+ R S DSR+H CL+FI P GH L+ +++ MKK+D VNIIP+I
Sbjct: 197 HRLNAYFQNEVKMDRETSEI-DSRIHGCLFFINPNGHRLQPLEIYIMKKIDQFVNIIPVI 255
Query: 559 AKADTISKTELQRFKSKIMQELQSNGVEIYQFPVDDE 669
KADT++ EL FK +++ ++ + ++ P +++
Sbjct: 256 GKADTMTSDELNHFKKRVIADMVREKIRYFREPHNEK 292
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 126 bits (303), Expect = 4e-30
Identities = 66/200 (33%), Positives = 113/200 (56%), Gaps = 9/200 (4%)
Frame = +1
Query: 76 VGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTN------FESSPSPHNL 237
+ DSLP + + + I+ G +G GK+T ++LF T+ +E++
Sbjct: 11 LNLDSLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKETIAK 70
Query: 238 PTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAYL---QEE 408
T+++K + +EE + LT+ DT G+GD ++ + V +Y+D Q E YL Q
Sbjct: 71 KTLEVKKNKAVIEEDGFHINLTVLDTPGFGDFIDNTSCWNTVAEYLDEQHERYLIHDQNS 130
Query: 409 LKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTISKTE 588
L++ R D+R+HVCLYFI P G+ +D++ MK+L T VN++P+IAKADT + E
Sbjct: 131 LRVPRK-----DTRVHVCLYFITPVSFGMLPLDVLAMKELSTHVNLVPVIAKADTFTTPE 185
Query: 589 LQRFKSKIMQELQSNGVEIY 648
L + K KI + L++ ++++
Sbjct: 186 LTQIKQKIRRILEAQSIDVF 205
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 113 bits (271), Expect = 3e-26
Identities = 50/142 (35%), Positives = 88/142 (61%)
Frame = +1
Query: 244 VKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAYLQEELKIKR 423
++++ ++ E + LT+ + G+GD+++ SF+ V Y+++QF+ L EE KIKR
Sbjct: 61 LEIREFNADILEDEFHVDLTVIEVNGFGDKIDNSASFEVVTHYLESQFDQALIEESKIKR 120
Query: 424 SLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTISKTELQRFK 603
+ S + D+R+ LYFI P GH L DL MK+ +VN+IP+I ++ ++ EL+ FK
Sbjct: 121 N-SKFTDTRVDALLYFIAPRGHCLSEFDLEAMKRFSKRVNVIPVIGNSNAFTEEELKNFK 179
Query: 604 SKIMQELQSNGVEIYQFPVDDE 669
IM++L+ ++++ FP D E
Sbjct: 180 DVIMKDLKQCNIKVFDFPWDPE 201
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 34.7 bits (76), Expect = 0.014
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +1
Query: 130 FVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 309
++F +L IG++G+GKS L+ + + + S + V K T+ELE V KL I
Sbjct: 7 YLFKLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTFELEGKTV--KLQIW 62
Query: 310 DTVG 321
DT G
Sbjct: 63 DTAG 66
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 33.9 bits (74), Expect = 0.025
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +1
Query: 130 FVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 309
++ +L IG++G+GKS L+ +F +PS + K T EL+ R+KL I
Sbjct: 8 YLIKLLLIGDSGVGKSCLLLRFSEDSF--TPSFITTIGIDFKIRTIELD--GKRIKLQIW 63
Query: 310 DTVG 321
DT G
Sbjct: 64 DTAG 67
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 31.9 bits (69), Expect = 0.10
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +1
Query: 151 IGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRL 294
+G G GKSTL+ ++ + E+ PSP + T AH+ + E++++ +
Sbjct: 476 VGHNGCGKSTLLRAIGDYKVENFPSPDEVKTC-FVAHSLQGEDTSMAI 522
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 31.1 bits (67), Expect = 0.18
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +1
Query: 52 RTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESS 219
R LK+ G D LP V +S++N + L I T +G S + DS+ N +FE +
Sbjct: 573 RDLKVFADYGSDKLPT--VEESLRNSPKPDTLWIHLTVIGHSLVQDSIVNGDFEKA 626
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 30.3 bits (65), Expect = 0.31
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 127 GFVFNILCI-GETGLGKSTLMDSLFNTNFESSPSPHNLPTVK 249
GF ++++ + G GKSTL+++LF T+F + T K
Sbjct: 36 GFNYHVVAVLGSQSTGKSTLLNNLFGTSFSVMDASKRQQTTK 77
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 29.5 bits (63), Expect = 0.54
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +1
Query: 130 FVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 309
++F + IG++G+GKS L+ F + + T+ ++ T + N ++K I
Sbjct: 9 YLFKTVLIGDSGVGKSNLLMRFTRNEF----NIESKSTIGVEFATRNIVLDNKKIKAQIW 64
Query: 310 DTVG 321
DT G
Sbjct: 65 DTAG 68
>SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase
Alg11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 471
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 475 CPTGHGLKSIDLVCMKKLDTKV-NIIPIIAKADTISKTE-LQRFKSKIMQELQSNGV 639
C G G + + +K + T+ N+I ++ D +SK E L+R K+ +L S+ +
Sbjct: 64 CNAGGGGERVLWTAVKSVQTEFPNVISVVYTGDNVSKAEILRRVKNTFEIDLDSSKI 120
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 58 LKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFN 201
+ L GH+ + Q V ++I G +++ +G G GKS L+D + +
Sbjct: 550 IPLVGHMDEQTKLYQWVRQTIVLGEGNSVIIVGPRGSGKSVLVDDILS 597
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 26.6 bits (56), Expect = 3.8
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +1
Query: 133 VFNILCIGETGLGKSTLMDSLFNTNF 210
+ ++ +GE+G+GK+++M+ N F
Sbjct: 8 LLKVIILGESGVGKTSIMNQYVNRKF 33
>SPAC1250.04c |atl1||alkyltransferase-like protein
Atl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 108
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 553 IIAKADTISKTELQRFKSKIMQELQSNGVEIYQ 651
+I TISK ++ + + L+ GVEIYQ
Sbjct: 59 VINSRGTISKRDISAGEQRQKDRLEEEGVEIYQ 91
>SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 342
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 289 RLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEA 393
R+ L C T G + E+S+K V+D D + A
Sbjct: 166 RVCLDTCHTFAAGYDIRTEESYKKVIDEFDEKVGA 200
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 85 DSLPDQLVSK-SIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLK 255
+ LP++ VSK S+++ GE+ STL D+ + F PSP +L KL+
Sbjct: 518 EGLPNRKVSKLSVESDETAVSASSGESVPTDSTLTDTKSKSVFVHPPSPQSLYVEKLE 575
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 26.2 bits (55), Expect = 5.0
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 145 LCIGETGLGKSTLMDSLFNTNFESSPSPHNL---PTVKLKAHTYELEESNVRLKLTICDT 315
LC+ + + SL F+S+ S + P KL ++ + KLT+ +
Sbjct: 3 LCLSGSSQAIPSKGISLVAARFQSTASRASYVTPPYEKLMGKLQQVRKFLPGQKLTLAEK 62
Query: 316 VGYGDQVNKEDSFKAV 363
V Y VN E+SF V
Sbjct: 63 VLYSHLVNPEESFSGV 78
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 369 IHH--RFETVFFIHLVTVTDSVTDC*LQPDIALLQLISVSLQLNSR*VMR 226
IHH + + + FI L + VT C PD L+ +++ S+ ++ MR
Sbjct: 138 IHHPLKKDLLAFIQLDIAAEVVTACINAPDSVLVDILAASIIAGAKACMR 187
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +1
Query: 145 LCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEES 282
LC G G GKSTLM ++ N E P+ +L TV ++ ++++ES
Sbjct: 465 LC-GPNGSGKSTLMRAIVNGQVEGFPT--HLRTVYVE---HDIDES 504
>SPAC24C9.12c |||glycine hydroxymethyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +1
Query: 340 KEDSFKAVVDYID--AQFEAYLQEEL 411
KE F VVDYID F A LQ+EL
Sbjct: 399 KEQDFVRVVDYIDRALTFAANLQKEL 424
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 25.8 bits (54), Expect = 6.6
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +1
Query: 82 FDSLPDQLVSKSIQNGFVFNILCIGET--GLGKSTLM--DSLFNTN 207
FD LP + + +QN FVF+ I E GL S + +S+++TN
Sbjct: 429 FDYLPARFICLKVQNPFVFHHSFIEEAKKGLNLSQWVQYNSVYSTN 474
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 13 AIDVEPTKAEPTLRTLKLSGHVGFDSLPDQLVSKSIQ 123
A D E K E L+ LKLS H L ++ S +I+
Sbjct: 532 AFDAESDKLERELQQLKLSSHNSMLQLDQRIQSINIE 568
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 94 PDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTN 207
P++LVS + N + GK+TL DSL +N
Sbjct: 6 PEKLVSLQKNQENIRNFTLLAHVDHGKTTLADSLLASN 43
>SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 508
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 319 GYGDQVNKEDSFKAVVDYIDAQFEAYLQEELKIKRS 426
G GD +NK DS K+V++ + + E + Q +L + S
Sbjct: 12 GSGDDLNKLDSLKSVLNDVLSSLERF-QVDLDVATS 46
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.134 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,865,008
Number of Sequences: 5004
Number of extensions: 58647
Number of successful extensions: 221
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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