Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1516
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.5  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   5.8  
AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical prote...    23   7.6  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 328  DQVNKEDSFKAVVDYIDAQFEAYLQEELKIKRSLSSYH 441
            D   + ++F AV+DY++  F      E  +K     YH
Sbjct: 1643 DHYKQSETFSAVLDYLNMIFICIFSSECLMKIFALRYH 1680


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -2

Query: 689 AVTSDTDSSSTGNW*ISTPFDCSSCIILDLNLCSSVLEMVSAL 561
           A  + T S   GN  ++ P D  SC +L   L +   ++ +AL
Sbjct: 79  AQPTPTASPVPGNMVVAGPIDAGSCALLMAQLQNIGAQLTTAL 121


>AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical protein
           protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 172 KSTLMDSLFNTNFESSPSPHNLPTVKL 252
           K    D  F+T  ++ P+PHN  T+ L
Sbjct: 87  KQDKKDITFSTTQDNFPTPHNRITIVL 113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.134    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,957
Number of Sequences: 2352
Number of extensions: 16328
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)