Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1516
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 266 2e-71
AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical... 266 2e-71
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 266 2e-71
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 164 7e-41
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 37 0.018
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 37 0.018
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 34 0.12
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 33 0.16
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 33 0.22
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 33 0.29
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 33 0.29
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 32 0.38
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 32 0.38
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 32 0.38
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 31 0.66
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 31 0.66
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 31 1.2
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 30 1.5
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 30 1.5
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 30 1.5
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 30 1.5
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 30 1.5
AL032658-4|CAA21746.1| 283|Caenorhabditis elegans Hypothetical ... 29 2.7
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 29 3.5
U40942-6|AAP68937.1| 709|Caenorhabditis elegans High temperatur... 29 4.7
U40942-5|AAC47068.1| 729|Caenorhabditis elegans High temperatur... 29 4.7
U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin iso... 29 4.7
AY070228-1|AAL55425.1| 729|Caenorhabditis elegans HID-1 protein. 29 4.7
AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical ... 29 4.7
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 28 6.2
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 28 6.2
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 28 8.1
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 266 bits (651), Expect = 2e-71
Identities = 116/214 (54%), Positives = 166/214 (77%)
Frame = +1
Query: 37 AEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFES 216
++ T R ++L+GHVGFDSLP QLV K+++ GF FN++C+GETG GK+TL++SLFN +
Sbjct: 67 SDHTGRLMQLNGHVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLFNMKLDF 126
Query: 217 SPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAY 396
P H L TV+L+ T ++ E +R+KL + +T G+GDQ++K+ S K +VDY+++QFE Y
Sbjct: 127 EPCNHELKTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETY 186
Query: 397 LQEELKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTI 576
LQEELK +R L ++DSR+H CLYFI PTGHGLK++DLV +++L +VN+IP+IAK+DT
Sbjct: 187 LQEELKPRRMLQYFNDSRIHACLYFISPTGHGLKALDLVTLRELAKRVNVIPVIAKSDTT 246
Query: 577 SKTELQRFKSKIMQELQSNGVEIYQFPVDDESVS 678
K EL RFK+KI+ EL+S ++IY FP DDE+VS
Sbjct: 247 CKDELLRFKAKILSELKSQKIDIYTFPTDDETVS 280
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 693 MNSHLPFAVVGSTDFVK 743
MN +PFAVVGS DFVK
Sbjct: 286 MNKSVPFAVVGSIDFVK 302
>AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical
protein Y50E8A.4b protein.
Length = 461
Score = 266 bits (651), Expect = 2e-71
Identities = 116/214 (54%), Positives = 166/214 (77%)
Frame = +1
Query: 37 AEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFES 216
++ T R ++L+GHVGFDSLP QLV K+++ GF FN++C+GETG GK+TL++SLFN +
Sbjct: 67 SDHTGRLMQLNGHVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLFNMKLDF 126
Query: 217 SPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAY 396
P H L TV+L+ T ++ E +R+KL + +T G+GDQ++K+ S K +VDY+++QFE Y
Sbjct: 127 EPCNHELKTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETY 186
Query: 397 LQEELKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTI 576
LQEELK +R L ++DSR+H CLYFI PTGHGLK++DLV +++L +VN+IP+IAK+DT
Sbjct: 187 LQEELKPRRMLQYFNDSRIHACLYFISPTGHGLKALDLVTLRELAKRVNVIPVIAKSDTT 246
Query: 577 SKTELQRFKSKIMQELQSNGVEIYQFPVDDESVS 678
K EL RFK+KI+ EL+S ++IY FP DDE+VS
Sbjct: 247 CKDELLRFKAKILSELKSQKIDIYTFPTDDETVS 280
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 693 MNSHLPFAVVGSTDFVK 743
MN +PFAVVGS DFVK
Sbjct: 286 MNKSVPFAVVGSIDFVK 302
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 266 bits (651), Expect = 2e-71
Identities = 116/214 (54%), Positives = 166/214 (77%)
Frame = +1
Query: 37 AEPTLRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFES 216
++ T R ++L+GHVGFDSLP QLV K+++ GF FN++C+GETG GK+TL++SLFN +
Sbjct: 136 SDHTGRLMQLNGHVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLFNMKLDF 195
Query: 217 SPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAY 396
P H L TV+L+ T ++ E +R+KL + +T G+GDQ++K+ S K +VDY+++QFE Y
Sbjct: 196 EPCNHELKTVELRTCTKDVAEGGIRVKLRLVETAGFGDQLDKDKSAKVIVDYLESQFETY 255
Query: 397 LQEELKIKRSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTI 576
LQEELK +R L ++DSR+H CLYFI PTGHGLK++DLV +++L +VN+IP+IAK+DT
Sbjct: 256 LQEELKPRRMLQYFNDSRIHACLYFISPTGHGLKALDLVTLRELAKRVNVIPVIAKSDTT 315
Query: 577 SKTELQRFKSKIMQELQSNGVEIYQFPVDDESVS 678
K EL RFK+KI+ EL+S ++IY FP DDE+VS
Sbjct: 316 CKDELLRFKAKILSELKSQKIDIYTFPTDDETVS 349
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 693 MNSHLPFAVVGSTDFVK 743
MN +PFAVVGS DFVK
Sbjct: 355 MNKSVPFAVVGSIDFVK 371
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 164 bits (398), Expect = 7e-41
Identities = 79/199 (39%), Positives = 132/199 (66%), Gaps = 6/199 (3%)
Frame = +1
Query: 79 GFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLF-----NTNFESSPSPHNLP- 240
GF + P+Q+ ++++NGF F ++ +G +GLGKST +++LF N N + S H P
Sbjct: 29 GFANFPNQVFRRAVKNGFDFTLMVVGRSGLGKSTFINTLFLAEINNLNEKESAPTHPHPS 88
Query: 241 TVKLKAHTYELEESNVRLKLTICDTVGYGDQVNKEDSFKAVVDYIDAQFEAYLQEELKIK 420
TV+++ +L E++V L LT+ DT G+GD VN ++ +V+Y++++F EE +I
Sbjct: 89 TVRVEEKLVKLVENSVSLNLTLVDTPGFGDAVNNSKCWEPIVNYVESKFFEQFCEETRID 148
Query: 421 RSLSSYHDSRLHVCLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTISKTELQRF 600
R D +H+CLYFI P+GHGLK ID+ MK L +VNI+P+I+KAD +++ EL RF
Sbjct: 149 RG-EKIVDKCVHLCLYFIEPSGHGLKPIDIELMKHLHGRVNIVPVISKADCLTRDELLRF 207
Query: 601 KSKIMQELQSNGVEIYQFP 657
K +I+++ ++ +++Y+FP
Sbjct: 208 KKQIVKDAETAEIKLYKFP 226
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +1
Query: 130 FVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 309
++F + IG+ G+GKS L+ F + PH T+ ++ T +E S ++KL I
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKF-MADCPH---TIGVEFGTRIIEVSGQKIKLQIW 65
Query: 310 DTVG 321
DT G
Sbjct: 66 DTAG 69
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +1
Query: 130 FVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 309
++F + IG+ G+GKS L+ F + PH T+ ++ T +E S ++KL I
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKF-MADCPH---TIGVEFGTRIIEVSGQKIKLQIW 65
Query: 310 DTVG 321
DT G
Sbjct: 66 DTAG 69
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 28 PTKAEPTLRTLKLSGHVGFDSLPDQLVSKS--IQNGFVFNILCIGETGLGKSTLMDSLFN 201
P K T TL G VGFD+ + +G NI G +G+G+S++ S N
Sbjct: 674 PAKRRKTRETLSFLGDVGFDTWTGVTTGMGGRVGDGVTKNI-TRGLSGIGRSSMSSSTGN 732
Query: 202 TNFESSPS 225
TN E + S
Sbjct: 733 TNNEDANS 740
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +1
Query: 142 ILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTICDTVG 321
IL IGE+G+GKS+LM + F+ P T+ + + R+KL I DT G
Sbjct: 14 ILIIGESGVGKSSLMLRFVDDVFD----PEQAATIGVDFRVTSMAIDGNRVKLAIWDTAG 69
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +1
Query: 133 VFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTICD 312
+F +L IG++G+GKS+L+ + F S + + T+ + ++ + R+KL I D
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRFADNTF----SENYITTIGVDFKIRTMDINGQRVKLQIWD 65
Query: 313 TVG 321
T G
Sbjct: 66 TAG 68
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 133 VFNILCIGETGLGKSTLM----DSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKL 300
+F +L IG++G+GK+ ++ D FNT F S+ + K T EL+ ++KL
Sbjct: 9 LFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIG------IDFKIKTIELK--GKKIKL 60
Query: 301 TICDTVG 321
I DT G
Sbjct: 61 QIWDTAG 67
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 133 VFNILCIGETGLGKSTLM----DSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKL 300
+F +L IG++G+GK+ ++ D FNT F S+ + K T EL+ ++KL
Sbjct: 9 LFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIG------IDFKIKTIELK--GKKIKL 60
Query: 301 TICDTVG 321
I DT G
Sbjct: 61 QIWDTAG 67
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 130 FVFNILCIGETGLGKSTLM----DSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLK 297
++F +L IG++G+GK+ ++ D FN +F S+ + K T EL+ ++K
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIG------IDFKIRTIELD--GKKIK 58
Query: 298 LTICDTVG 321
L I DT G
Sbjct: 59 LQIWDTAG 66
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 130 FVFNILCIGETGLGKSTLM----DSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLK 297
++F +L IG++G+GK+ ++ D FN +F S+ + K T EL+ ++K
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIG------IDFKIRTIELD--GKKIK 58
Query: 298 LTICDTVG 321
L I DT G
Sbjct: 59 LQIWDTAG 66
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 130 FVFNILCIGETGLGKSTLM----DSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLK 297
++F +L IG++G+GK+ ++ D FN +F S+ + K T EL+ ++K
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIG------IDFKIRTIELD--GKKIK 58
Query: 298 LTICDTVG 321
L I DT G
Sbjct: 59 LQIWDTAG 66
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 31.5 bits (68), Expect = 0.66
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +1
Query: 130 FVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 309
++F +L IG++G+GKS L+ + + + S + V K T EL+ + KL I
Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTI--KLQIW 65
Query: 310 DTVG 321
DT G
Sbjct: 66 DTAG 69
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 31.5 bits (68), Expect = 0.66
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +1
Query: 130 FVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 309
++F +L IG++G+GKS L+ + + + S + V K T EL+ + KL I
Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTY--TESYISTIGVDFKIRTIELDGKTI--KLQIW 65
Query: 310 DTVG 321
DT G
Sbjct: 66 DTAG 69
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +1
Query: 133 VFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTICD 312
+F +L IG++G+GKS+L+ + F S + + T+ + ++ + R+KL I D
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRFADNTF----SENYITTIGVDFKIRTMDINGQRVKLQIWD 65
Query: 313 T 315
T
Sbjct: 66 T 66
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.5
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +1
Query: 25 EPTKAEPT--LRTLKLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKSTLMDSLF 198
E T AEPT L +LS + F L D+ + I + ++ +G G GK++++ L
Sbjct: 333 ESTAAEPTAVLDQSQLSTRIAFSFLNDRKLH--IGDFIESRVVLLGLDGAGKTSIVRRLK 390
Query: 199 NTNFESSPSPHNLPTVKLKAHTYELEESNVRL 294
++ +PH PT+ T + N RL
Sbjct: 391 KVQMDTVMAPH--PTIGFNIET--IHYKNYRL 418
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 130 FVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 309
++F + IG+TG+GKS L+ + F+ H+L T+ ++ + ++KL I
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQ---PVHDL-TIGVEFGARMVTIDGKQIKLQIW 60
Query: 310 DTVG 321
DT G
Sbjct: 61 DTAG 64
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +1
Query: 109 SKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNV 288
S+ + ++F ++ IG++G+GKS L+ F + T+ ++ T +
Sbjct: 3 SRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFHL----ESKSTIGVEFATRSISVEGK 58
Query: 289 RLKLTICDTVG 321
+K I DT G
Sbjct: 59 TVKAQIWDTAG 69
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = +1
Query: 109 SKSIQNGFVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNV 288
S+ + ++F ++ IG++G+GKS L+ F + + T+ ++ T +
Sbjct: 3 SRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF----NLESKSTIGVEFATRSISVEGK 58
Query: 289 RLKLTICDTVG 321
+K I DT G
Sbjct: 59 TVKAQIWDTAG 69
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 30.3 bits (65), Expect = 1.5
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Frame = +1
Query: 136 FNILCIGETGLGKSTLMDSLFNTNFESSP--SPHNLPTVKLKAHTYELEESNVRLKLTIC 309
+ + E G G+S DS+ +ES P SP N+ + ++ + V T
Sbjct: 1228 YEVNVFSENGFGRSLPTDSVKARTYESVPSGSPRNIVVTAEGSKAAIIKWNPVAELSTNG 1287
Query: 310 DTVGYGDQV--NKEDSFKAVVDYIDAQFEAYLQEELKIKRSLSSYH 441
D +GY +V +E ID ++ L ++ R +SYH
Sbjct: 1288 DVIGYKLRVVPERESLMADETKVIDIPGQSTLMAKVSDLRPFTSYH 1333
>AL032658-4|CAA21746.1| 283|Caenorhabditis elegans Hypothetical
protein Y76A2B.5 protein.
Length = 283
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/40 (27%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 529 DTKVNIIPIIAKADT-ISKTELQRFKSKIMQELQSNGVEI 645
DT+ N+I +++ + + +T L + K + M+E+Q+N ++
Sbjct: 82 DTEHNLINLLSNTNIEVDRTHLAQLKEEAMEEIQANAADV 121
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 133 VFNILCIGETGLGKSTLMDSLFNTNFES-SPSPHNLPTVKLKAHTYELEESNVRLKLTIC 309
VF + IG+ G+GKS L+ F+S PS T+ ++ LE ++KL +
Sbjct: 6 VFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPS-----TLGIEFGFRNLEIDRKKVKLHVW 60
Query: 310 DTVG 321
DT G
Sbjct: 61 DTCG 64
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 325 GDQVNKEDSFKAVVDYIDAQFEAY--LQEELKIKRSLSSYHDS 447
GD S KA+ ++ D F++Y + + K+S SSYH S
Sbjct: 546 GDNFISSSSSKAIENHYDVPFDSYEIVDKSENTKKSSSSYHAS 588
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 325 GDQVNKEDSFKAVVDYIDAQFEAY--LQEELKIKRSLSSYHDS 447
GD S KA+ ++ D F++Y + + K+S SSYH S
Sbjct: 546 GDNFISSSSSKAIENHYDVPFDSYEIVDKSENTKKSSSSYHAS 588
>U40942-6|AAP68937.1| 709|Caenorhabditis elegans High
temperature-induced dauerformation protein 1, isoform b
protein.
Length = 709
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = -2
Query: 662 STGNW*ISTPFDCSSCIILDLNLCSSVLEMVSALAMIGMMFTLVSSFFI 516
+TGN+ + T FDC I+++++ L MV+A ++ ++ + +F+
Sbjct: 436 TTGNYRLQTLFDCFLTIMVNVSPYMKSLSMVAANKLVHLVEAFSTPWFL 484
>U40942-5|AAC47068.1| 729|Caenorhabditis elegans High
temperature-induced dauerformation protein 1, isoform a
protein.
Length = 729
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = -2
Query: 662 STGNW*ISTPFDCSSCIILDLNLCSSVLEMVSALAMIGMMFTLVSSFFI 516
+TGN+ + T FDC I+++++ L MV+A ++ ++ + +F+
Sbjct: 436 TTGNYRLQTLFDCFLTIMVNVSPYMKSLSMVAANKLVHLVEAFSTPWFL 484
>U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin
isoform 3 protein.
Length = 173
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 61 KLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKS 177
K SG + + L D +V K+ N F LC GE G+GKS
Sbjct: 15 KASGRIVME-LYDDVVPKTAGN---FRALCTGENGIGKS 49
>AY070228-1|AAL55425.1| 729|Caenorhabditis elegans HID-1 protein.
Length = 729
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = -2
Query: 662 STGNW*ISTPFDCSSCIILDLNLCSSVLEMVSALAMIGMMFTLVSSFFI 516
+TGN+ + T FDC I+++++ L MV+A ++ ++ + +F+
Sbjct: 436 TTGNYRLQTLFDCFLTIMVNVSPYMKSLSMVAANKLVHLVEAFSTPWFL 484
>AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical
protein Y75B12B.5 protein.
Length = 173
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 61 KLSGHVGFDSLPDQLVSKSIQNGFVFNILCIGETGLGKS 177
K SG + + L D +V K+ N F LC GE G+GKS
Sbjct: 15 KASGRIVME-LYDDVVPKTAGN---FRALCTGENGIGKS 49
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +1
Query: 130 FVFNILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLKAHTYELEESNVRLKLTIC 309
++F + IG+TG+GKS L+ + F+ H+L T+ ++ + ++KL +
Sbjct: 5 YLFKHIIIGDTGVGKSCLLLQFTDKRFQ---PVHDL-TIGVEFGARMVTIDGKQIKLQMW 60
Query: 310 DTVG 321
DT G
Sbjct: 61 DTAG 64
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 142 ILCIGETGLGKSTLMDSLFNTNFESSPSPHNLPTVKLK-AHTYELEESNVRLKLTICDTV 318
++ +GE+G GK+ L+ + FE+ P L T+ + H ++L + DT
Sbjct: 9 VVVVGESGAGKTALLTCFLDNTFETDP----LTTIGIDFKHKIVQLNDGQSIRLQLWDTA 64
Query: 319 G 321
G
Sbjct: 65 G 65
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical protein
F30H5.3 protein.
Length = 1599
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 460 CLYFICPTGHGLKSIDLVCMKKLDTKVNIIPIIAKADTIS-KTELQRF 600
CL C G ++++ VCMKK+ ++ PI + + +T+ RF
Sbjct: 1300 CLDATCTCPEGEEAVEDVCMKKMSRPMSTCPIPGQIPFLELRTKAARF 1347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,906,073
Number of Sequences: 27780
Number of extensions: 333053
Number of successful extensions: 1022
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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