Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1516
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    31   0.015
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    31   0.015
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   1.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.1  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   3.1  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   5.3  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 30.7 bits (66), Expect = 0.015
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +1

Query: 223 SPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQV-NKEDSFKAVVDYIDAQFEAYL 399
           S H L     +  T E+  S    KL+    + +GD++ +  DSF+A +  I+  +   L
Sbjct: 498 STHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLESSHDSFQAALRSIENYYSGKL 557

Query: 400 QEELKIKRSLSSYHDSRL 453
           +   + + +L  YH  RL
Sbjct: 558 ERTEEQRIALRKYHAPRL 575


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 30.7 bits (66), Expect = 0.015
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +1

Query: 223 SPHNLPTVKLKAHTYELEESNVRLKLTICDTVGYGDQV-NKEDSFKAVVDYIDAQFEAYL 399
           S H L     +  T E+  S    KL+    + +GD++ +  DSF+A +  I+  +   L
Sbjct: 536 STHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLESSHDSFQAALRSIENYYSGKL 595

Query: 400 QEELKIKRSLSSYHDSRL 453
           +   + + +L  YH  RL
Sbjct: 596 ERTEEQRIALRKYHAPRL 613


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 142 ILCIGETGLGKSTLMDSLFNTNFESS 219
           +  +G    GK+TL+D+L NT+   S
Sbjct: 148 VTIMGHVDHGKTTLLDALRNTSIAKS 173


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -2

Query: 656 GNW*ISTPFDCSSCIILDLNLCSSVLEMVSALAM 555
           G W +  P  C S + LD+ LC++ +  + A+++
Sbjct: 102 GTWELG-PMLCDSWVSLDILLCTASILSLCAISI 134


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 475 CPTGHGLKSIDLVCMKKLDTKV 540
           CP G  L S  L+C++K+ T +
Sbjct: 64  CPDGLKLLSDGLMCVEKVSTTI 85


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -1

Query: 672 GLVVHRELVDLHAVRLQLLHYFGLE-PLQLSLGDGVS 565
           GL +H EL    A  + L  Y G E    L+L D V+
Sbjct: 69  GLFLHEELRRTEAFEVDLEFYLGKEWKKNLNLRDSVT 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.134    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,339
Number of Sequences: 438
Number of extensions: 4127
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)