Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1515
         (666 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358239-1|AAQ88606.1|  102|Homo sapiens KLIA6249 protein.             31   3.7  
AY358831-1|AAQ89190.1|  512|Homo sapiens MUC13 protein.                31   4.9  
AF286113-1|AAK56861.1|  512|Homo sapiens transmembrane mucin MUC...    31   4.9  
AB035807-1|BAB19651.1|  512|Homo sapiens down-regulated in colon...    31   4.9  
BC038799-1|AAH38799.1|  745|Homo sapiens PCDH21 protein protein.       30   6.5  
AB053448-1|BAB61905.1|  858|Homo sapiens KIAA1775 protein protein.     30   6.5  
S41541-1|AAB22781.1|  186|Homo sapiens acidic neurotrophin 6 gam...    30   8.5  

>AY358239-1|AAQ88606.1|  102|Homo sapiens KLIA6249 protein.
          Length = 102

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +2

Query: 428 IVQTSPEPTSASPSMTPSETPMADSVYRKKYTEQDPGPYM----GHVTLISDSNSTTSLH 595
           + +T  E  + +P+ TP+ETP A++    + T++ P P            + + +T+S+ 
Sbjct: 24  VEETPTETPAETPAETPAETP-AETPAPAEATQETPAPAQETPAATQATSAATQATSSIT 82

Query: 596 PLKFGNFL 619
           P K G+FL
Sbjct: 83  PAKSGSFL 90


>AY358831-1|AAQ89190.1|  512|Homo sapiens MUC13 protein.
          Length = 512

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
 Frame = +2

Query: 326 PKISDKQLSLRPLQQALAGNLANNVNKLIVPPRQIVQTSPEPTSASPSMTPSETPMADSV 505
           P IS    S  P+  A       NVN L       + T+  P     +M PSET   + +
Sbjct: 88  PIISTHSSSTIPIPTAADSESTTNVNSLATSD---IITASSPNDGLITMVPSETQSNNEM 144

Query: 506 YRKKYTEQDPGPYMGHVTL-ISDSNSTTSLHP 598
                  Q  GP  G   L  S  NST   +P
Sbjct: 145 SPTTEDNQSSGPPTGTALLETSTLNSTGPSNP 176


>AF286113-1|AAK56861.1|  512|Homo sapiens transmembrane mucin MUC13
           protein.
          Length = 512

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
 Frame = +2

Query: 326 PKISDKQLSLRPLQQALAGNLANNVNKLIVPPRQIVQTSPEPTSASPSMTPSETPMADSV 505
           P IS    S  P+  A       NVN L       + T+  P     +M PSET   + +
Sbjct: 88  PIISTHSSSTIPIPTAADSESTTNVNSLATSD---IITASSPNDGLITMVPSETQSNNEM 144

Query: 506 YRKKYTEQDPGPYMGHVTL-ISDSNSTTSLHP 598
                  Q  GP  G   L  S  NST   +P
Sbjct: 145 SPTTEDNQSSGPPTGTALLETSTLNSTGPSNP 176


>AB035807-1|BAB19651.1|  512|Homo sapiens down-regulated in colon
           cancer 1 protein.
          Length = 512

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
 Frame = +2

Query: 326 PKISDKQLSLRPLQQALAGNLANNVNKLIVPPRQIVQTSPEPTSASPSMTPSETPMADSV 505
           P IS    S  P+  A       NVN L       + T+  P     +M PSET   + +
Sbjct: 88  PIISTHSSSTIPIPTAADSESTTNVNSLATSD---IITASSPNDGLITMVPSETQSNNEM 144

Query: 506 YRKKYTEQDPGPYMGHVTL-ISDSNSTTSLHP 598
                  Q  GP  G   L  S  NST   +P
Sbjct: 145 SPTTEDNQSSGPPTGTALLETSTLNSTGPSNP 176


>BC038799-1|AAH38799.1|  745|Homo sapiens PCDH21 protein protein.
          Length = 745

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +2

Query: 476 PSETPMADSVYRKKYTEQDPGPYMGHVTLISDSNSTTSLHPLKFGNFLKKSNLGNILQDG 655
           P +TP+   VY    T+ +  P   H++    + S  S+ P  FGN      L    +D 
Sbjct: 45  PEDTPVGSHVYTLNGTDPEGDPISYHISFDPSTRSVFSVDP-TFGNITLVEELDREREDE 103

Query: 656 IK 661
           I+
Sbjct: 104 IE 105


>AB053448-1|BAB61905.1|  858|Homo sapiens KIAA1775 protein protein.
          Length = 858

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +2

Query: 476 PSETPMADSVYRKKYTEQDPGPYMGHVTLISDSNSTTSLHPLKFGNFLKKSNLGNILQDG 655
           P +TP+   VY    T+ +  P   H++    + S  S+ P  FGN      L    +D 
Sbjct: 44  PEDTPVGSHVYTLNGTDPEGDPISYHISFDPSTRSVFSVDP-TFGNITLVEELDREREDE 102

Query: 656 IK 661
           I+
Sbjct: 103 IE 104


>S41541-1|AAB22781.1|  186|Homo sapiens acidic neurotrophin 6 gamma
           protein.
          Length = 186

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = -1

Query: 588 DVVLLESEIKVTWPIYGPGSCSVYFFL*TESAIGVSDGVIEGLAEVGSGEVCTIWRGG 415
           D+V+LE E+    P  G  S   +FF+    A    D   EG   VG G    +W GG
Sbjct: 87  DLVVLEVEVLGEVPAAGSSSLHQHFFVTCFKA----DNSEEGGPGVGGGAAAGVWTGG 140


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,541,192
Number of Sequences: 237096
Number of extensions: 1680703
Number of successful extensions: 6019
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5974
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)