Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1515
         (666 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr...    31   0.73 
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr...    31   0.73 
U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AF016687-7|AAK72063.1|  881|Caenorhabditis elegans Hypothetical ...    28   6.8  
AF016443-5|AAK68183.1|  284|Caenorhabditis elegans Hypothetical ...    28   6.8  
AC024817-16|AAF59585.2|  610|Caenorhabditis elegans Hypothetical...    28   6.8  
Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ...    27   9.1  
AF016417-6|AAB65283.2|  313|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
            T08G11.1b protein.
          Length = 3185

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 23/77 (29%), Positives = 34/77 (44%)
 Frame = +2

Query: 311  VNSFKPKISDKQLSLRPLQQALAGNLANNVNKLIVPPRQIVQTSPEPTSASPSMTPSETP 490
            ++S + ++SD     + L Q L+GNLA   +  I PP       P P+S   S T +   
Sbjct: 1312 IHSIEAEMSDADY--KTLMQTLSGNLAEGADLAIPPP-------PPPSSLESSNTAAALT 1362

Query: 491  MADSVYRKKYTEQDPGP 541
                   KK  E + GP
Sbjct: 1363 SPGKEKEKKDREANAGP 1379


>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
            T08G11.1a protein.
          Length = 3212

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 23/77 (29%), Positives = 34/77 (44%)
 Frame = +2

Query: 311  VNSFKPKISDKQLSLRPLQQALAGNLANNVNKLIVPPRQIVQTSPEPTSASPSMTPSETP 490
            ++S + ++SD     + L Q L+GNLA   +  I PP       P P+S   S T +   
Sbjct: 1312 IHSIEAEMSDADY--KTLMQTLSGNLAEGADLAIPPP-------PPPSSLESSNTAAALT 1362

Query: 491  MADSVYRKKYTEQDPGP 541
                   KK  E + GP
Sbjct: 1363 SPGKEKEKKDREANAGP 1379


>U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical
           protein F25E2.2 protein.
          Length = 624

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +2

Query: 437 TSPEPTSASPSMTPSETPMADSVYRKKYTEQDPGPYMGHVTLISDSNSTTSLHPLK 604
           T+P+PT+ + + T   TP   +  +   T   P P     T I  + +TT+  PLK
Sbjct: 427 TTPKPTTTTTTTT---TPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPLK 479


>AF016687-7|AAK72063.1|  881|Caenorhabditis elegans Hypothetical
           protein T21D12.9a protein.
          Length = 881

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 485 TPMADSVYRKKYTEQDPGPYMGHVTLISDSNSTTSLHPLKFGNF 616
           TP  D +Y    T++D G Y  H T ++   +  S + + F NF
Sbjct: 667 TPNDDHIYIMNVTKEDQGAYTCHATNVA-GQTQASANLIVFENF 709


>AF016443-5|AAK68183.1|  284|Caenorhabditis elegans Hypothetical
           protein C17E7.13 protein.
          Length = 284

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 645 NILPRLLFFRKFPNLSGCSDVVLLESEIKVTWP 547
           N LP    F++ P  +G     +LESE++++WP
Sbjct: 218 NFLPVPEHFQQKPEENGMMVSRVLESEVRISWP 250


>AC024817-16|AAF59585.2|  610|Caenorhabditis elegans Hypothetical
           protein Y54G2A.13 protein.
          Length = 610

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +2

Query: 437 TSPEPTSASPSMTPSETPMADSVYRKKYTEQDPGPYMGHVTLISDSNSTTS 589
           T P PT+ +P+ T   T   +   +   TE+   P     T ++  N TTS
Sbjct: 158 TPPPPTTTTPTTTLKPTTSPE---KHSTTEEATSPSQNETTSVTTQNPTTS 205


>Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical
           protein C27D8.3b protein.
          Length = 916

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 449 PTSASPSMTPSETPM-ADSVYRKKYTEQDPGPYMGHVTLISDSNSTTS 589
           PTS+S    PSE    A ++ ++ +  Q+  P M  + + S S+ST+S
Sbjct: 752 PTSSSSVHAPSECVFTAPNLPQRYHQNQNHDPLMSMMMMTSSSSSTSS 799


>Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical
           protein C27D8.3a protein.
          Length = 982

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 449 PTSASPSMTPSETPM-ADSVYRKKYTEQDPGPYMGHVTLISDSNSTTS 589
           PTS+S    PSE    A ++ ++ +  Q+  P M  + + S S+ST+S
Sbjct: 818 PTSSSSVHAPSECVFTAPNLPQRYHQNQNHDPLMSMMMMTSSSSSTSS 865


>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
           protein Y71A12B.4 protein.
          Length = 1913

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/73 (20%), Positives = 38/73 (52%)
 Frame = +2

Query: 323 KPKISDKQLSLRPLQQALAGNLANNVNKLIVPPRQIVQTSPEPTSASPSMTPSETPMADS 502
           +PK +D+++  R  +++  G L+  + ++     ++ Q S EP++    +  +   M  +
Sbjct: 87  RPKSADEEIKRR--RRSGGGILSRGLREMNKMVEELEQASEEPSTRKGILGTALKDMEGT 144

Query: 503 VYRKKYTEQDPGP 541
            Y+K Y +++  P
Sbjct: 145 TYQKIYRKREETP 157


>AF016417-6|AAB65283.2|  313|Caenorhabditis elegans Hypothetical
           protein F17A9.6 protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
 Frame = +2

Query: 359 PLQQALAGNLANNVNKLIVPPRQIVQTSPEPTSASP--------SMTPSETPMADSVYRK 514
           P Q  +   L N+++       Q+VQT P  T A+P            + +P + +  + 
Sbjct: 71  PKQMTMYSQLDNDIDAKKENNTQVVQTQPSQTRAAPYQKRAPLKQRQEAVSPSSSNSEQS 130

Query: 515 KYTEQDPGPYMGHVTLISD 571
           KY++Q+    + + T+I +
Sbjct: 131 KYSKQEALAMLDNPTIIKE 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,931,007
Number of Sequences: 27780
Number of extensions: 256356
Number of successful extensions: 1116
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)