Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1511
(479 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008596-1|AAH08596.1| 336|Homo sapiens TMEM19 protein protein. 32 1.2
AK223148-1|BAD96868.1| 336|Homo sapiens transmembrane protein 1... 31 2.8
AJ549097-1|CAD82835.1| 109|Homo sapiens FUS/BBF2H7 protein prot... 31 2.8
AK001798-1|BAA91918.1| 298|Homo sapiens protein ( Homo sapiens ... 30 3.7
X97260-1|CAA65915.1| 61|Homo sapiens Metallothionein 2 protein. 30 4.8
V00594-1|CAA23841.1| 61|Homo sapiens protein ( Human mRNA for ... 30 4.8
S52379-1|AAB24908.1| 61|Homo sapiens metallothionein-II protein. 30 4.8
J00271-1|AAA59583.1| 61|Homo sapiens metallothionein II protein. 30 4.8
DQ370420-1|ABC79300.1| 61|Homo sapiens metallothionein 2A prot... 30 4.8
BT007315-1|AAP35979.1| 61|Homo sapiens metallothionein 2A prot... 30 4.8
BC070289-1|AAH70289.1| 61|Homo sapiens MT2A protein protein. 30 4.8
BC007034-1|AAH07034.1| 61|Homo sapiens MT2A protein protein. 30 4.8
AY077636-1|AAL76084.1| 61|Homo sapiens zinc-induced metallothi... 30 4.8
BC094799-1|AAH94799.1| 1222|Homo sapiens valosin containing prot... 29 8.5
BC049379-1|AAH49379.1| 785|Homo sapiens VCPIP1 protein protein. 29 8.5
BC001473-1|AAH01473.1| 563|Homo sapiens glucocorticoid modulato... 29 8.5
AL645729-3|CAH72427.1| 573|Homo sapiens glucocorticoid modulato... 29 8.5
AL645729-2|CAH72428.1| 563|Homo sapiens glucocorticoid modulato... 29 8.5
AL645729-1|CAH72426.1| 360|Homo sapiens glucocorticoid modulato... 29 8.5
AK026785-1|BAB15552.1| 439|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK000892-1|BAA91410.1| 563|Homo sapiens protein ( Homo sapiens ... 29 8.5
AJ549093-1|CAD79343.1| 396|Homo sapiens FUS/BBF2H7 protein prot... 29 8.5
AF203694-1|AAG01189.1| 563|Homo sapiens glucocorticoid modulato... 29 8.5
AF173868-1|AAD51352.1| 563|Homo sapiens DNA binding protein p96... 29 8.5
AF099013-1|AAD39355.1| 573|Homo sapiens glucocorticoid modulato... 29 8.5
AB058753-1|BAB47479.1| 1236|Homo sapiens KIAA1850 protein protein. 29 8.5
>BC008596-1|AAH08596.1| 336|Homo sapiens TMEM19 protein protein.
Length = 336
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -3
Query: 300 VTVRVVLVQN--KSFSVDHSDCSNGAFVRFSLCIADCSTFTS 181
V V V++V N K S+DHS G V F L IA+ S FTS
Sbjct: 58 VVVPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANFSFFTS 99
>AK223148-1|BAD96868.1| 336|Homo sapiens transmembrane protein 19
variant protein.
Length = 336
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -3
Query: 300 VTVRVVLVQN--KSFSVDHSDCSNGAFVRFSLCIADCSTFTS 181
+ V V++V N K S+DHS G V F L IA+ S FTS
Sbjct: 58 LVVPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANFSFFTS 99
>AJ549097-1|CAD82835.1| 109|Homo sapiens FUS/BBF2H7 protein
protein.
Length = 109
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 109 YGEDDSNMEMTGFDGSATGDVNISGGEGGAVGDAQAKSN 225
YG+D S+M G G G+ + SGG GG+ G Q S+
Sbjct: 48 YGQDQSSMSSGGGSGGGYGNQDQSGG-GGSGGSLQPASD 85
>AK001798-1|BAA91918.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ10936 fis, clone OVARC1000959, weakly similar to
HYPOTHETICAL PROTEIN MJ0933. ).
Length = 298
Score = 30.3 bits (65), Expect = 3.7
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 294 VRVVLVQN--KSFSVDHSDCSNGAFVRFSLCIADCSTFTS 181
V V++V N K S+DHS G V F L IA+ S FTS
Sbjct: 60 VPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANFSFFTS 99
>X97260-1|CAA65915.1| 61|Homo sapiens Metallothionein 2 protein.
Length = 61
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 343 CIASDSCSCRPSFLC-DCTCSPC 278
C A DSC+C S C +C C+ C
Sbjct: 7 CAAGDSCTCAGSCKCKECKCTSC 29
>V00594-1|CAA23841.1| 61|Homo sapiens protein ( Human mRNA for
metallothionein from cadmium-treated cells. ).
Length = 61
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 343 CIASDSCSCRPSFLC-DCTCSPC 278
C A DSC+C S C +C C+ C
Sbjct: 7 CAAGDSCTCAGSCKCKECKCTSC 29
>S52379-1|AAB24908.1| 61|Homo sapiens metallothionein-II protein.
Length = 61
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 343 CIASDSCSCRPSFLC-DCTCSPC 278
C A DSC+C S C +C C+ C
Sbjct: 7 CAAGDSCTCAGSCKCKECKCTSC 29
>J00271-1|AAA59583.1| 61|Homo sapiens metallothionein II protein.
Length = 61
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 343 CIASDSCSCRPSFLC-DCTCSPC 278
C A DSC+C S C +C C+ C
Sbjct: 7 CAAGDSCTCAGSCKCKECKCTSC 29
>DQ370420-1|ABC79300.1| 61|Homo sapiens metallothionein 2A
protein.
Length = 61
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 343 CIASDSCSCRPSFLC-DCTCSPC 278
C A DSC+C S C +C C+ C
Sbjct: 7 CAAGDSCTCAGSCKCKECKCTSC 29
>BT007315-1|AAP35979.1| 61|Homo sapiens metallothionein 2A
protein.
Length = 61
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 343 CIASDSCSCRPSFLC-DCTCSPC 278
C A DSC+C S C +C C+ C
Sbjct: 7 CAAGDSCTCAGSCKCKECKCTSC 29
>BC070289-1|AAH70289.1| 61|Homo sapiens MT2A protein protein.
Length = 61
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 343 CIASDSCSCRPSFLC-DCTCSPC 278
C A DSC+C S C +C C+ C
Sbjct: 7 CAAGDSCTCAGSCKCKECKCTSC 29
>BC007034-1|AAH07034.1| 61|Homo sapiens MT2A protein protein.
Length = 61
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 343 CIASDSCSCRPSFLC-DCTCSPC 278
C A DSC+C S C +C C+ C
Sbjct: 7 CAAGDSCTCAGSCKCKECKCTSC 29
>AY077636-1|AAL76084.1| 61|Homo sapiens zinc-induced
metallothionein 2A/1A hybrid protein.
Length = 61
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 343 CIASDSCSCRPSFLC-DCTCSPC 278
C A DSC+C S C +C C+ C
Sbjct: 7 CAAGDSCTCAGSCKCKECKCTSC 29
>BC094799-1|AAH94799.1| 1222|Homo sapiens valosin containing protein
(p97)/p47 complex interacting protein 1 protein.
Length = 1222
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 169 VNISGGEGGAVGDAQAKSNEGAIRTVRMING-KTFVLYKD 285
VNI G VGD Q + +E + T ++ G KT L+K+
Sbjct: 666 VNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKE 705
>BC049379-1|AAH49379.1| 785|Homo sapiens VCPIP1 protein protein.
Length = 785
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 169 VNISGGEGGAVGDAQAKSNEGAIRTVRMING-KTFVLYKD 285
VNI G VGD Q + +E + T ++ G KT L+K+
Sbjct: 230 VNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKE 269
>BC001473-1|AAH01473.1| 563|Homo sapiens glucocorticoid modulatory
element binding protein 1 protein.
Length = 563
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +2
Query: 35 KWNQSLLMRVCGMTMKMARTMTKLITERTILIWK*LVLMALQLEMLIFLEVKVEQ 199
+WN +L V T + + ++ I+E T++ WK + + L E++ ++ ++E+
Sbjct: 218 EWNSALTAAVTMATEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEE 272
>AL645729-3|CAH72427.1| 573|Homo sapiens glucocorticoid modulatory
element binding proteinS. cerevisiae) protein.
Length = 573
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +2
Query: 35 KWNQSLLMRVCGMTMKMARTMTKLITERTILIWK*LVLMALQLEMLIFLEVKVEQ 199
+WN +L V T + + ++ I+E T++ WK + + L E++ ++ ++E+
Sbjct: 228 EWNSALTAAVTMATEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEE 282
>AL645729-2|CAH72428.1| 563|Homo sapiens glucocorticoid modulatory
element binding proteinS. cerevisiae) protein.
Length = 563
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +2
Query: 35 KWNQSLLMRVCGMTMKMARTMTKLITERTILIWK*LVLMALQLEMLIFLEVKVEQ 199
+WN +L V T + + ++ I+E T++ WK + + L E++ ++ ++E+
Sbjct: 218 EWNSALTAAVTMATEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEE 272
>AL645729-1|CAH72426.1| 360|Homo sapiens glucocorticoid modulatory
element binding proteinS. cerevisiae) protein.
Length = 360
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +2
Query: 35 KWNQSLLMRVCGMTMKMARTMTKLITERTILIWK*LVLMALQLEMLIFLEVKVEQ 199
+WN +L V T + + ++ I+E T++ WK + + L E++ ++ ++E+
Sbjct: 194 EWNSALTAAVTMATEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEE 248
>AK026785-1|BAB15552.1| 439|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23132 fis, clone LNG08559. ).
Length = 439
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 169 VNISGGEGGAVGDAQAKSNEGAIRTVRMING-KTFVLYKD 285
VNI G VGD Q + +E + T ++ G KT L+K+
Sbjct: 40 VNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKE 79
>AK000892-1|BAA91410.1| 563|Homo sapiens protein ( Homo sapiens
cDNA FLJ10030 fis, clone HEMBA1000851. ).
Length = 563
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +2
Query: 35 KWNQSLLMRVCGMTMKMARTMTKLITERTILIWK*LVLMALQLEMLIFLEVKVEQ 199
+WN +L V T + + ++ I+E T++ WK + + L E++ ++ ++E+
Sbjct: 218 EWNSALTAAVTMATEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEE 272
>AJ549093-1|CAD79343.1| 396|Homo sapiens FUS/BBF2H7 protein
protein.
Length = 396
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 109 YGEDDSNMEMTGFDGSATGDVNISGGEGGAVGDAQAKSNEGA 234
YG+D S+M G G G+ + SGG G +K G+
Sbjct: 60 YGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGSQPHSKPFPGS 101
>AF203694-1|AAG01189.1| 563|Homo sapiens glucocorticoid modulatory
element binding protein 1 protein.
Length = 563
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +2
Query: 35 KWNQSLLMRVCGMTMKMARTMTKLITERTILIWK*LVLMALQLEMLIFLEVKVEQ 199
+WN +L V T + + ++ I+E T++ WK + + L E++ ++ ++E+
Sbjct: 218 EWNSALTAAVTMATEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEE 272
>AF173868-1|AAD51352.1| 563|Homo sapiens DNA binding protein p96PIF
protein.
Length = 563
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +2
Query: 35 KWNQSLLMRVCGMTMKMARTMTKLITERTILIWK*LVLMALQLEMLIFLEVKVEQ 199
+WN +L V T + + ++ I+E T++ WK + + L E++ ++ ++E+
Sbjct: 218 EWNSALTAAVTMATEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEE 272
>AF099013-1|AAD39355.1| 573|Homo sapiens glucocorticoid modulatory
element binding protein-1 protein.
Length = 573
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +2
Query: 35 KWNQSLLMRVCGMTMKMARTMTKLITERTILIWK*LVLMALQLEMLIFLEVKVEQ 199
+WN +L V T + + ++ I+E T++ WK + + L E++ ++ ++E+
Sbjct: 228 EWNSALTAAVTMATEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEIEE 282
>AB058753-1|BAB47479.1| 1236|Homo sapiens KIAA1850 protein protein.
Length = 1236
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 169 VNISGGEGGAVGDAQAKSNEGAIRTVRMING-KTFVLYKD 285
VNI G VGD Q + +E + T ++ G KT L+K+
Sbjct: 680 VNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKE 719
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,675,298
Number of Sequences: 237096
Number of extensions: 1126492
Number of successful extensions: 7127
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7099
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -