Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1504
         (575 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    33   0.28 
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ...    33   0.28 
AY180916-2|AAN87267.1|  417|Drosophila melanogaster ORF2 protein.      29   4.5  
AY089699-1|AAL90437.1|  417|Drosophila melanogaster SD06908p pro...    29   4.5  
BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p pro...    28   7.9  
AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB...    28   7.9  
AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA...    28   7.9  

>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
            protein.
          Length = 5327

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 17   ITTETDTYTKIVKEGENEITQTITVVTTKEVISPEKIKITVETTTVSKGSD 169
            ITT   T TK++     EI      VTT +   P+  K+ V TT  +  S+
Sbjct: 4844 ITTTITTVTKVISADGKEIVTEQKTVTTTDSSEPDSEKVVVTTTRTTSESE 4894


>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
            protein.
          Length = 5412

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 17   ITTETDTYTKIVKEGENEITQTITVVTTKEVISPEKIKITVETTTVSKGSD 169
            ITT   T TK++     EI      VTT +   P+  K+ V TT  +  S+
Sbjct: 4929 ITTTITTVTKVISADGKEIVTEQKTVTTTDSSEPDSEKVVVTTTRTTSESE 4979


>AY180916-2|AAN87267.1|  417|Drosophila melanogaster ORF2 protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 13  RNYH*NGYIYENSQRR*K*NYTNYNCGDNQRGDQSRENQNNG--RNYDSQ 156
           +NY+  GY   N  R     + N   G N+RG+QS+ N NN   RN  S+
Sbjct: 359 QNYN-QGYNNNNRGRGGYRGHGNNRDGGNRRGNQSQNNNNNRNVRNVQSE 407


>AY089699-1|AAL90437.1|  417|Drosophila melanogaster SD06908p
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 13  RNYH*NGYIYENSQRR*K*NYTNYNCGDNQRGDQSRENQNNG--RNYDSQ 156
           +NY+  GY   N  R     + N   G N+RG+QS+ N NN   RN  S+
Sbjct: 359 QNYN-QGYNNNNRGRGGYRGHGNNRDGGNRRGNQSQNNNNNRNVRNVQSE 407


>BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p
           protein.
          Length = 1374

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +2

Query: 11  GEITTETDTYTKIVKEGENEITQTITVVTTKEVIS-PEKIKITV-ETTTVSKGS 166
           GE+T   D Y + + +   ++T+ + V +  EV   P  I IT  E  T  KG+
Sbjct: 120 GELTYSVDDYPETIPQACVDMTKVLEVTSAVEVTGHPNSIAITAPERVTFVKGT 173


>AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB,
           isoform B protein.
          Length = 1373

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +2

Query: 11  GEITTETDTYTKIVKEGENEITQTITVVTTKEVIS-PEKIKITV-ETTTVSKGS 166
           GE+T   D Y + + +   ++T+ + V +  EV   P  I IT  E  T  KG+
Sbjct: 107 GELTYSVDDYPETIPQACVDMTKVLEVTSAVEVTGHPNSIAITAPERVTFVKGT 160


>AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA,
           isoform A protein.
          Length = 1553

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +2

Query: 11  GEITTETDTYTKIVKEGENEITQTITVVTTKEVIS-PEKIKITV-ETTTVSKGS 166
           GE+T   D Y + + +   ++T+ + V +  EV   P  I IT  E  T  KG+
Sbjct: 107 GELTYSVDDYPETIPQACVDMTKVLEVTSAVEVTGHPNSIAITAPERVTFVKGT 160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,171,259
Number of Sequences: 53049
Number of extensions: 405806
Number of successful extensions: 1174
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)