Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1504
(575 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 27 0.10
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 1.6
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 1.6
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 2.2
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 3.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 3.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 3.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.0
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 6.6
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 8.7
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 8.7
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 27.5 bits (58), Expect = 0.10
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 73 YTNYNCGDNQRGDQSRENQN-NGRNYDSQ 156
Y N N G+ +Q+ +NQN N +N D+Q
Sbjct: 422 YHNQNAGNQNADNQNADNQNANNQNADNQ 450
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 70 NYTNYNCGDNQRGDQSRENQNNGRNYDSQ 156
N N N + R + ++ NQN+ D+Q
Sbjct: 508 NRQNDNKRNGNRQNDNQNNQNDNNRNDNQ 536
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 73 YTNYNCGDNQRGDQSRENQNNGRNY 147
Y+NYN +N + + N N NY
Sbjct: 324 YSNYNNYNNNYNNYNNYNNNYNNNY 348
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 431 DDGQASPSSTKSQIAHSPRSNL 496
++G ASP ST S +SP S +
Sbjct: 129 NNGYASPMSTSSYDPYSPNSKI 150
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 70 NYTNYNCGDNQRGDQSRENQNNG 138
N N DN G+ + N NNG
Sbjct: 248 NNNNNGANDNGNGNGASNNNNNG 270
Score = 21.4 bits (43), Expect = 6.6
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 4 TCRRNYH*NGYIYENSQRR*K*NYTNYNCGDNQRGDQSRENQNNGRN 144
TC+RN + N I + N N +N + + N NNG N
Sbjct: 218 TCQRNSN-NSTITAGN--------ANTNASNNNNNNNNNNNNNNGAN 255
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 340 YVFPIRHQFQGFKSCYAFLGYGK 408
Y+F I +QFQ F + L G+
Sbjct: 181 YIFLIFNQFQDFSESFQILHAGR 203
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 340 YVFPIRHQFQGFKSCYAFLGYGK 408
Y+F I +QFQ F + L G+
Sbjct: 181 YIFLIFNQFQDFSESFQILHAGR 203
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 340 YVFPIRHQFQGFKSCYAFLGYGK 408
Y+F I +QFQ F + L G+
Sbjct: 181 YIFLIFNQFQDFSESFQILHAGR 203
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 82 YNCGDNQRGDQSRENQ 129
YN G+N+ G+Q+ Q
Sbjct: 1564 YNSGNNRSGEQANSQQ 1579
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 439 SVVVTVINTTTFRTPKMRSSS*TPGT 362
+ +T I TTT T +++ TP T
Sbjct: 655 ATTITTITTTTTTTTTTTTTTTTPNT 680
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.4 bits (43), Expect = 6.6
Identities = 5/18 (27%), Positives = 11/18 (61%)
Frame = +3
Query: 519 SFNNLTTRIWIPILHKDP 572
++NN+ +W P + + P
Sbjct: 65 AYNNVNNWLWTPFIERGP 82
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 73 YTNYNCGDNQRGDQSRENQNN 135
Y+NYN +N + N NN
Sbjct: 91 YSNYNNYNNNYNNNYNNNYNN 111
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 73 YTNYNCGDNQRGDQSRENQNN 135
Y+NYN +N + N NN
Sbjct: 91 YSNYNNYNNNYNNNYNNNYNN 111
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,046
Number of Sequences: 438
Number of extensions: 3073
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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