Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1500
         (774 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069621-1|AAL39766.1|  595|Drosophila melanogaster LD39177p pro...    31   2.3  
AE014298-911|AAF46175.2|  615|Drosophila melanogaster CG14444-PA...    31   2.3  
AY113238-1|AAM29243.1| 1566|Drosophila melanogaster AT11515p pro...    30   3.1  
AE014134-2480|AAF53382.2| 1566|Drosophila melanogaster CG15287-P...    30   3.1  
K01664-1|AAA28872.1|   81|Drosophila melanogaster protein ( D.me...    30   4.1  

>AY069621-1|AAL39766.1|  595|Drosophila melanogaster LD39177p
           protein.
          Length = 595

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 519 LYDHSIYSCIIPLDNSINRILMN 587
           LYDH +Y C+IP  + +  +L N
Sbjct: 22  LYDHKLYECVIPAADLLRTVLKN 44


>AE014298-911|AAF46175.2|  615|Drosophila melanogaster CG14444-PA,
           isoform A protein.
          Length = 615

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 519 LYDHSIYSCIIPLDNSINRILMN 587
           LYDH +Y C+IP  + +  +L N
Sbjct: 22  LYDHKLYECVIPAADLLRTVLKN 44


>AY113238-1|AAM29243.1| 1566|Drosophila melanogaster AT11515p protein.
          Length = 1566

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 514  ISAELFFLYFMFTYHKYYRSGFICKDDYNNKDQ*MEIYCFIT 389
            I  + F LY     HK Y S F  KD +N+  + +E + F+T
Sbjct: 1482 IEQQRFSLYMAMLKHKVYPSYFQFKDQFNSHVRNIEFFQFMT 1523


>AE014134-2480|AAF53382.2| 1566|Drosophila melanogaster CG15287-PA
            protein.
          Length = 1566

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 514  ISAELFFLYFMFTYHKYYRSGFICKDDYNNKDQ*MEIYCFIT 389
            I  + F LY     HK Y S F  KD +N+  + +E + F+T
Sbjct: 1482 IEQQRFSLYMAMLKHKVYPSYFQFKDQFNSHVRNIEFFQFMT 1523


>K01664-1|AAA28872.1|   81|Drosophila melanogaster protein (
           D.melanogaster Bkm-likeDNA (proximal region X
           chromosome) 5' end, clone CS319.).
          Length = 81

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +3

Query: 549 IPLDNSINRILMNTYI-IICSGGIHIYFNVYICNYISVQICMYWFMVFL*RCDVVVFLVG 725
           I L  S   I ++ Y+ I  S  + IY ++Y+C Y+S+ + +Y   ++L     +   + 
Sbjct: 12  ISLGGSFIGIYLSIYLSIYLSIYLSIYLSIYLCIYLSISLSIY-LSIYLSIYLSIYLSIY 70

Query: 726 LSLFMT 743
           LSL+++
Sbjct: 71  LSLYLS 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,307,597
Number of Sequences: 53049
Number of extensions: 510149
Number of successful extensions: 874
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)