Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1500
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical pr...    31   0.69 
Z81139-6|CAH60791.2|  358|Caenorhabditis elegans Hypothetical pr...    29   4.9  

>Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical
           protein T09F5.16 protein.
          Length = 311

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 20/80 (25%), Positives = 34/80 (42%)
 Frame = -3

Query: 703 SHLYRNTMNQYIHICTLI*LHIYTLK*ICIPPEHIIM*VFINIRLIELSNGMMHEYIEWS 524
           +H Y++     I     I    +TL          +  + + + +  L  G+MH+  E+ 
Sbjct: 49  NHFYKSIKKIQIVNAIYILYFFFTLFMAFFGATFFVFLIPVLLIVFPLVTGLMHDVNEFL 108

Query: 523 YKAISAELFFLYFMFTYHKY 464
              +S + F LYFM  Y KY
Sbjct: 109 LGLLSIQRFCLYFMPNYEKY 128


>Z81139-6|CAH60791.2|  358|Caenorhabditis elegans Hypothetical
           protein W05H5.8 protein.
          Length = 358

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
 Frame = +3

Query: 501 NSADIALYDHSIYSCIIPLDNS-INRILMNTYIIICSGGIHIYFNVYI--------CNYI 653
           NS + +LY   IY    P +   I  I+     I+CS  ++ Y +V +           +
Sbjct: 8   NSTNYSLYWLPIYFYDEPFNQQVIISIVEIALYILCSQAVNAYVHVTLKIRLFHRNLYIL 67

Query: 654 SVQICMYWFMVFL*RCDVV 710
           SV IC+ W+++   +C V+
Sbjct: 68  SVPICILWYLLIAGKCIVI 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,928,102
Number of Sequences: 27780
Number of extensions: 299631
Number of successful extensions: 797
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)