Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1499
         (679 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          25   0.88 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   4.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.2  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   8.2  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 12/56 (21%), Positives = 25/56 (44%)
 Frame = +1

Query: 85  YWSTRIIKIN*QYKAVSFFRIF*CSPFDNKVSLER*IAPSRVGRYFSYFYREGTFW 252
           Y++  ++K+N   K V+         FDN   +      +++ + F+Y Y    +W
Sbjct: 212 YYNLTMVKLNWPKKRVTKMSSINPCIFDNATIVNNGPEAAKMAKAFTYTYNYSMYW 267


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 171 IIEWRTLENAKERNSFILLVYFNYSCRPIT 82
           +I+ R L   +E  +  ++V  N+S  P+T
Sbjct: 490 VIDGRVLSVKRELGNDTVIVMMNFSKNPVT 519


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 339 NRHYYTFKP 313
           NRHYY F P
Sbjct: 472 NRHYYAFVP 480


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 435 EKFLVNDYHFTE 470
           +KF+ NDY+F E
Sbjct: 553 QKFINNDYNFNE 564


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,585
Number of Sequences: 438
Number of extensions: 3687
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)