Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1490
         (316 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3K4 Cluster: Putative uncharacterized protein PFE130...    35   0.40 
UniRef50_Q5CQG0 Cluster: Possible WWE domain; n=2; Cryptosporidi...    31   3.8  
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|...    30   8.7  
UniRef50_P14738 Cluster: Fibronectin-binding protein precursor; ...    30   8.7  

>UniRef50_Q8I3K4 Cluster: Putative uncharacterized protein PFE1300w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE1300w - Plasmodium falciparum
           (isolate 3D7)
          Length = 409

 Score = 34.7 bits (76), Expect = 0.40
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 103 YPLSTNGSITIRNTIKELQTKSSM*FKYNRYGNNCF 210
           YP     ++ +RN IK +   S+M  KYN+Y N C+
Sbjct: 237 YPEKKMDNLIMRNIIKSIDKMSTMRIKYNKYDNICY 272


>UniRef50_Q5CQG0 Cluster: Possible WWE domain; n=2;
            Cryptosporidium|Rep: Possible WWE domain -
            Cryptosporidium parvum Iowa II
          Length = 1246

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -3

Query: 239  HY*IVISLNXKQLLPYLLYLNYMDDFVCNSLIVLRIVIDP 120
            H  I    N  ++ P+L   N++D+FV  + I+++ +IDP
Sbjct: 884  HLDIFRKYNHVKICPWLAISNFVDEFVLRTPILVKCIIDP 923


>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
           stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
          Length = 763

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +1

Query: 37  SITYLSLVSVTKDRQI--YSFFLTYPLSTNGSITIRNTIKELQTKSSM*FKYNRYGN 201
           S  YL++  +  D  I  YS +L+  + T+GSI I N  K  +   S+ FKYN+Y N
Sbjct: 607 SCNYLNIPIIIPDYNIKPYSPYLSGLIDTDGSI-IFNYSKN-RIDCSLLFKYNKYSN 661


>UniRef50_P14738 Cluster: Fibronectin-binding protein precursor;
           n=48; Staphylococcus aureus|Rep: Fibronectin-binding
           protein precursor - Staphylococcus aureus (strain NCTC
           8325)
          Length = 1018

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 58  VSVTKDRQIYSFFLTYPLSTNGSITIRNTIKELQTKSSM*FKY 186
           V VT + +I  F     + TNG+ TI +T+ E QT   +  KY
Sbjct: 295 VDVTAELEINLFIDPKTVQTNGNQTITSTLNEEQTSKELDVKY 337


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,062,991
Number of Sequences: 1657284
Number of extensions: 4571280
Number of successful extensions: 7661
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7661
length of database: 575,637,011
effective HSP length: 81
effective length of database: 441,397,007
effective search space used: 10152131161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)