Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1490
         (316 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0398 - 28644632-28644889,28644997-28645032,28645101-286453...    27   3.1  

>02_05_0398 -
           28644632-28644889,28644997-28645032,28645101-28645364,
           28645439-28645522,28645718-28645798,28645888-28645965,
           28646571-28646672,28646754-28646849,28646955-28647161,
           28647246-28647493,28647577-28647773,28647997-28648112
          Length = 588

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +1

Query: 79  QIYSFFLTYPLSTNGSITIRNTIKELQTKSSM*FKYNRYGNNC 207
           Q++    +   S  G   +R+  K+L     +  K+NRYG  C
Sbjct: 102 QVHEMLESTKKSGRGPTMMRSLWKDLDPNEKIRLKFNRYGQPC 144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,089,580
Number of Sequences: 37544
Number of extensions: 106141
Number of successful extensions: 181
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 386885760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)