Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1490
         (316 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46934-12|CAA87044.3|  539|Caenorhabditis elegans Hypothetical p...    28   1.6  
Z81035-2|CAB02736.1|  379|Caenorhabditis elegans Hypothetical pr...    27   3.8  
Z75546-7|CAA99895.1|  566|Caenorhabditis elegans Hypothetical pr...    26   5.0  
U80024-7|AAW88409.1|  295|Caenorhabditis elegans Serpentine rece...    26   5.0  
U80024-6|AAW88410.1|  300|Caenorhabditis elegans Serpentine rece...    26   5.0  
Z72505-7|CAA96614.1|  333|Caenorhabditis elegans Hypothetical pr...    26   6.6  
Z70780-16|CAA94829.1|  333|Caenorhabditis elegans Hypothetical p...    26   6.6  
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ...    26   6.6  
AC006675-9|AAK84553.1|  431|Caenorhabditis elegans Hypothetical ...    26   6.6  
AC024214-7|AAF36078.2|  189|Caenorhabditis elegans Hypothetical ...    25   8.7  

>Z46934-12|CAA87044.3|  539|Caenorhabditis elegans Hypothetical
           protein ZK1320.6 protein.
          Length = 539

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -3

Query: 308 TILDDKLIRY*NRSNHETPASIRHY*IVISLNXKQLLPYLLYLNYMDDFVCNSL 147
           T+ D  L    + S H T    +H  I ++     L+   L+ +Y+ +FVC  L
Sbjct: 121 TVCDSNLCERCSESTHSTNVLSKHRRIPLTEKPPPLVHCRLHSSYVVEFVCKEL 174


>Z81035-2|CAB02736.1|  379|Caenorhabditis elegans Hypothetical
           protein C15H11.2 protein.
          Length = 379

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 179 NYMDDFVCNSLIVLRIVIDPFV 114
           N   +++ NSL+VL  VI+PF+
Sbjct: 327 NLDSNYILNSLVVLNSVINPFI 348


>Z75546-7|CAA99895.1|  566|Caenorhabditis elegans Hypothetical
           protein R05D11.8 protein.
          Length = 566

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 52  SLVSV-TKDRQIYSFFLTYPLSTNGSITIRNTIK 150
           S++S  TKD  +Y   LT   + NG++T+ N IK
Sbjct: 8   SVISTETKDGNVYQGKLTTYDTNNGNLTMANVIK 41


>U80024-7|AAW88409.1|  295|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 7 protein.
          Length = 295

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 34  FSITYLSLVSVTKDRQIYSFFLTYPLSTNGSI 129
           FSI Y       ++ Q +  ++ +PL T+G+I
Sbjct: 69  FSILYSCFTEEFREHQAFIVYIGFPLQTSGAI 100


>U80024-6|AAW88410.1|  300|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 8 protein.
          Length = 300

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 34  FSITYLSLVSVTKDRQIYSFFLTYPLSTNGSI 129
           FSI Y       +++Q++  ++ +PL T G+I
Sbjct: 69  FSILYSFFTEELREQQVFIVYVGFPLQTVGAI 100


>Z72505-7|CAA96614.1|  333|Caenorhabditis elegans Hypothetical
           protein C50C10.1 protein.
          Length = 333

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +1

Query: 28  RPFSITYLSLVSVTKDRQIYSFFLTYPLSTNGSITI 135
           +PF    + + ++T+D +IY+ F  Y + +N SI +
Sbjct: 183 KPFPFGAIVITALTRDMRIYTIF--YSMFSNASIIL 216


>Z70780-16|CAA94829.1|  333|Caenorhabditis elegans Hypothetical
           protein C50C10.1 protein.
          Length = 333

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +1

Query: 28  RPFSITYLSLVSVTKDRQIYSFFLTYPLSTNGSITI 135
           +PF    + + ++T+D +IY+ F  Y + +N SI +
Sbjct: 183 KPFPFGAIVITALTRDMRIYTIF--YSMFSNASIIL 216


>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
           protein Y113G7B.12 protein.
          Length = 1042

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 79  QIYSFFLTYPLSTNGSITIRNTIKELQTKSSM*FKYN 189
           QIYSFFL +   +N         K L+T++++  K+N
Sbjct: 22  QIYSFFLGFTTESNLCGICLTIRKHLETRNAIISKFN 58


>AC006675-9|AAK84553.1|  431|Caenorhabditis elegans Hypothetical
           protein M02H5.3 protein.
          Length = 431

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +2

Query: 131 QFVTLLKSYKRNHPCNSN 184
           +F  LLK++K N+PC+S+
Sbjct: 6   KFFILLKTHKMNNPCSSS 23


>AC024214-7|AAF36078.2|  189|Caenorhabditis elegans Hypothetical
           protein Y77E11A.8 protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 152 SYKRNHPCNSNTIGMVII 205
           SYK N+ CN N  G++I+
Sbjct: 123 SYKMNYSCNGNFNGLLIL 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,679,895
Number of Sequences: 27780
Number of extensions: 112871
Number of successful extensions: 239
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)