Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1486
(782 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 455 e-129
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 260 1e-70
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 248 5e-67
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 172 4e-44
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 116 3e-27
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 113 4e-26
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 103 4e-23
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 75 9e-15
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 69 8e-13
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 4e-04
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 38 0.002
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 36 0.007
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.11
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.19
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 30 0.43
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 0.57
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.75
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 29 0.99
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 28 1.3
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 1.3
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 27 2.3
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.0
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 27 3.0
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.0
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 5.3
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 7.0
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 7.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 7.0
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 26 7.0
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 25 9.3
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 9.3
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 455 bits (1121), Expect = e-129
Identities = 209/226 (92%), Positives = 220/226 (97%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 283
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 284 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 463
RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121
Query: 464 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 643
I+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 181
Query: 644 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 781
GRDLTDYLMKIL ERGY+F+TTAEREIVRDIKEKLCYVALDFEQE+
Sbjct: 182 GRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQEL 227
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 260 bits (638), Expect = 1e-70
Identities = 117/221 (52%), Positives = 163/221 (73%), Gaps = 1/221 (0%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 301
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 302 KYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 478
+ PIE GI+ NW DME+IW + + ++ L PEEHP+LLTE PL N+EK+ + +ET
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 479 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 658
N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GRD+T
Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVT 191
Query: 659 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 781
DYL L + G+ ++AE+EIVR+IKEK CYVA DF E+
Sbjct: 192 DYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEI 232
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 248 bits (608), Expect = 5e-67
Identities = 115/223 (51%), Positives = 161/223 (72%), Gaps = 2/223 (0%)
Frame = +2
Query: 110 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 283
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 284 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 463
R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P+NP ANREKM +
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121
Query: 464 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 643
MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H + RLD+A
Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVA 181
Query: 644 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 772
GRD T YL+ +L +GY+F TA+ E VR++KEKLCYV+ D E
Sbjct: 182 GRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYDLE 224
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 172 bits (419), Expect = 4e-44
Identities = 102/253 (40%), Positives = 142/253 (56%), Gaps = 34/253 (13%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 250
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 251 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 409
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126
Query: 410 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 565
LLTE PLNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DS
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDS 186
Query: 566 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIVRDIK 739
GDGV+H +P+ EGY + +I + LAGRD+T ++ +L +R S TAER IK
Sbjct: 187 GDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IK 241
Query: 740 EKLCYVALDFEQE 778
E+ CYV D +E
Sbjct: 242 EECCYVCPDIVKE 254
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 116 bits (280), Expect = 3e-27
Identities = 64/223 (28%), Positives = 118/223 (52%), Gaps = 3/223 (1%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 301
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSI 82
Query: 302 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 478
+ P E +++NWD ME++ +TF +L + EHP+ +TE NP R MT+++FE
Sbjct: 83 ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141
Query: 479 FNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 652
+N P++ I + S Y + + ++GIVL+ G+ SH +P+ G + R+ G
Sbjct: 142 YNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQ 201
Query: 653 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 781
+ YL+K+ + SF + C+V+ D+ ++
Sbjct: 202 SSSYLLKLFQIKYPSFPIKMLPSQAELLMHDHCHVSSDYTHDI 244
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 113 bits (271), Expect = 4e-26
Identities = 64/196 (32%), Positives = 101/196 (51%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 287 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 466
G + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K +
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLET 120
Query: 467 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 646
MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L +G
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSG 180
Query: 647 RDLTDYLMKILTERGY 694
+ D L + L ++ +
Sbjct: 181 NAINDILAQTLRDKNF 196
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 103 bits (246), Expect = 4e-23
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 2/200 (1%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 287 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 460
I + +K +GI+ +W+ W +L+V P E+ +++TE NP++ R+++
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIM 121
Query: 461 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 640
+ FE + PA Y+ QAV +A+ ++T +++D G + P+ +G + I + L
Sbjct: 122 EAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSL 181
Query: 641 AGRDLTDYLMKILTERGYSF 700
AG L + ++ F
Sbjct: 182 AGDFLNANIEQLFNTMNIEF 201
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 75.4 bits (177), Expect = 9e-15
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 18/238 (7%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 301
+V+DNG+ KAGFAG P+ + R + G + ++G+E + TL
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57
Query: 302 KYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIM 469
++ H G + +W +W N + P ++ +LLT+ + Q++
Sbjct: 58 QFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLV 117
Query: 470 FETFNTPAMYVAIQAVLSLYASGRTT--------------GIVLDSGDGVSHTVPIYEGY 607
FE F A A L + G T +V+DSG +H +P+ +
Sbjct: 118 FEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFS 177
Query: 608 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 781
A+ R+D+ G+ LT+YL ++++ R Y+ E IV +IKE +CYV+ +F+++M
Sbjct: 178 VQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVNEIKESVCYVSQNFKEDM 233
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 68.9 bits (161), Expect = 8e-13
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Frame = +2
Query: 308 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 475
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 476 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 655
P +A + ++ LYA G G+V+D G + PI +G + A +L L GR +
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYM 231
Query: 656 TDYLMKILTERGYSFTTTAEREIVRDIKE 742
T +L +L E + ++ + DI E
Sbjct: 232 TQHLQNLLRESLPTLKSSGQYVSKEDITE 260
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.9 bits (89), Expect = 4e-04
Identities = 28/85 (32%), Positives = 39/85 (45%)
Frame = +3
Query: 483 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQT 662
++P TSP+ P +R P VP +S P P P PS P PS P+ TS
Sbjct: 997 SKPVSTSPAAPLARV--PPVPKLSSKAP----PVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Query: 663 TL*RSSPSAATRSLPPPSGKSFVTS 737
+ +SS A + P P+ S + S
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPS 1075
Score = 35.1 bits (77), Expect = 0.011
Identities = 24/75 (32%), Positives = 31/75 (41%)
Frame = +3
Query: 492 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTL* 671
P T+P P T PV P S P+ P P PS++ P PS P + +
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV- 1094
Query: 672 RSSPSAATRSLPPPS 716
PS A +P PS
Sbjct: 1095 -PKPSVAAPPVPKPS 1108
Score = 33.9 bits (74), Expect = 0.026
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Frame = +3
Query: 489 PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPCPSTKDTHSPTPSCVWT*PVAT 653
PP +P P P VPP S P A + P P P+ K P PS A
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS-----SEAP 1247
Query: 654 SQTTL*RSSPSAATRSLPPPSGKSFVTSRRSCATSLLTSSRK 779
S +T S PS + + P P+ S + S TS+ S K
Sbjct: 1248 SVSTPRSSVPSPHSNASPSPTSSS-MASAAPARTSVSRSKSK 1288
Score = 29.5 bits (63), Expect = 0.57
Identities = 25/96 (26%), Positives = 37/96 (38%)
Frame = +3
Query: 489 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTL 668
PP T+P P P VP + P P P PS++ TP P + + +
Sbjct: 1212 PPSTAPPVPTPSAGLPPVPVPTAKAP----PVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Query: 669 *RSSPSAATRSLPPPSGKSFVTSRRSCATSLLTSSR 776
SS ++A + S R +TS SS+
Sbjct: 1268 TSSSMASAAPARTSVSRSKSKAERHETSTSSRKSSK 1303
Score = 29.1 bits (62), Expect = 0.75
Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Frame = +3
Query: 489 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQT 662
PP +PS +P VPPV P+ P P PS P PS PV T
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPST--APPVPTPSA 1224
Query: 663 TL*R-SSPSAATRSLPPPSGKS-FVTSRRSCATS 758
L P+A +P PS ++ V++ RS S
Sbjct: 1225 GLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPS 1258
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +3
Query: 489 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTKDTHSPTPS 626
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 37.5 bits (83), Expect = 0.002
Identities = 28/146 (19%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Frame = +2
Query: 299 LKYPIEHGIVTNWD---------DMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKA 442
L YPI+ G+ D D+ +I+ ++ + L++ + + V+ L +
Sbjct: 198 LFYPIKSGVFNESDYASSQQLLADIYEIFKYSITSLLQIPVSQLSQYSVIFIVPDLYDRV 257
Query: 443 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 622
EK+ I+F + + +++ + + +G + V+D G + + EG +P++
Sbjct: 258 YVEKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNS 317
Query: 623 ILRLDLAGRDLTDYLMKILTERGYSF 700
++++ G D+T MK+L + +
Sbjct: 318 RIKINYGGDDITLLFMKLLMRSHFPY 343
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 35.9 bits (79), Expect = 0.007
Identities = 26/85 (30%), Positives = 35/85 (41%)
Frame = +3
Query: 471 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVA 650
S ++ P S S C+ T +PP T P ST T +P P T
Sbjct: 324 STGTSSSPLPSTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPPPAS-TSSTG 380
Query: 651 TSQTTL*RSSPSAATRSLPPPSGKS 725
TS + L +S S T + PP+G S
Sbjct: 381 TSSSPLLSTSTSCTTSTSIPPTGNS 405
Score = 35.5 bits (78), Expect = 0.009
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +3
Query: 468 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW-TPATVSPTPCPSTKDTHSPTPSCVWT*P 644
C+ ++ PP T S S P VPP S T + PT ST SP P+ +
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCT 230
Query: 645 VATSQTTL*RSSPSA-ATRSLPPPSGKS 725
+TS T SS S T ++PP S S
Sbjct: 231 TSTSIPTGGSSSLSTPITPTVPPTSTSS 258
Score = 34.7 bits (76), Expect = 0.015
Identities = 25/85 (29%), Positives = 34/85 (40%)
Frame = +3
Query: 471 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVA 650
S + P + S C+ T +PP T P ST T +P P T
Sbjct: 270 STDTNSSPLPTTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPPPAS-TSSTG 326
Query: 651 TSQTTL*RSSPSAATRSLPPPSGKS 725
TS + L +S S T + PP+G S
Sbjct: 327 TSSSPLPSTSTSCTTSTSIPPTGNS 351
Score = 32.3 bits (70), Expect = 0.081
Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +3
Query: 480 STRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATS 656
ST P T S S P VPP S T + PT ST SP P+ + +TS
Sbjct: 232 STSIP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTS 290
Query: 657 QTTL*RSSPSAATRSLPPPSGKSFVTSRRSCATS 758
+S + T ++PP S S T +TS
Sbjct: 291 IPPT-GNSTTPVTPTVPPTSTSSTSTPPPPASTS 323
Score = 32.3 bits (70), Expect = 0.081
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +3
Query: 477 HSTRP--PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVA 650
+ST P P P+ S T P PP S + T S +P PST + + + S T
Sbjct: 296 NSTTPVTPTVPPTSTSSTSTPP--PPASTSSTGT-SSSPLPSTSTSCTTSTSIPPTGNST 352
Query: 651 TSQTTL*RSSPSAATRSLPPPSGKSFVTSRRSCATSLLTS 770
T T + +++T + PPP+ S + S S TS
Sbjct: 353 TPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTS 392
Score = 31.5 bits (68), Expect = 0.14
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 468 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPSCVWT*P 644
C+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT------ 167
Query: 645 VATSQTTL*RSSPSAATRSLPPP 713
+TS TT P+ + SL P
Sbjct: 168 TSTSCTTSTSIPPTGGSSSLSTP 190
Score = 30.3 bits (65), Expect = 0.33
Identities = 25/92 (27%), Positives = 38/92 (41%)
Frame = +3
Query: 471 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVA 650
S ST PP S S + + + SC T ++ PT +T T + P+ T P+
Sbjct: 365 SSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSST-PLT 423
Query: 651 TSQTTL*RSSPSAATRSLPPPSGKSFVTSRRS 746
T+ T S P +T P + T+ S
Sbjct: 424 TTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
Score = 29.9 bits (64), Expect = 0.43
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -3
Query: 264 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 103
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.11
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +2
Query: 368 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 511
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.19
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 167 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 310
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.9 bits (64), Expect = 0.43
Identities = 25/80 (31%), Positives = 31/80 (38%)
Frame = +3
Query: 528 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTL*RSSPSAATRSLP 707
T P S TPA V P P PST T W Q + R++PS A P
Sbjct: 833 TSPYATTSSHITPADVHPLPPPSTSTTAG------WNDAPMLGQLPMRRAAPSMAPVRSP 886
Query: 708 PPSGKSFVTSRRSCATSLLT 767
P S + S +S+ T
Sbjct: 887 FPGASSAQPAAMSRTSSVST 906
Score = 27.1 bits (57), Expect = 3.0
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = +3
Query: 504 PSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTL*RSSP 683
P R + P VS +P+ +SP+ P S P T P + + P
Sbjct: 1023 PPTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSSRLPPVSATRPQIPQPPPVSTALP 1082
Query: 684 SAATRSLPPPSGKSFVTSRRSCATSLLT 767
S++ S PP + + +S + ++ LT
Sbjct: 1083 SSSAVSRPPIATSAGRSSTAASTSAPLT 1110
Score = 25.4 bits (53), Expect = 9.3
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +3
Query: 507 SKPCSRCTRPVVPPVSCWT---PATVSPTPCPSTKDTHSPTPSCVWT*PV 647
S+ S T P PP + T PA SP P + H PT S PV
Sbjct: 899 SRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPV 948
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 29.5 bits (63), Expect = 0.57
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 513 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 617
PC+ + PPV+C TP P C K H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.75
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Frame = +3
Query: 489 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTL 668
PP PS P P +PP A ++P P P+ P P P A +
Sbjct: 432 PPSAPPSLPMGAPAAPPLPP-----SAPIAP-PLPAGMPAAPPLPPAAPAPPPAPAPAP- 484
Query: 669 *RSSPSAATRSLPPPSGK-SFVTSRRSCATSLLTSSRK 779
++P A+ LP G+ + + S R+ L SRK
Sbjct: 485 --AAPVASIAELPQQDGRANLMASIRASGGMDLLKSRK 520
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 28.7 bits (61), Expect = 0.99
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 522 RCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTPSCVWT*PVATSQTTL*RSSPSA 689
R P P V + A SP TP P K+T +P+ S P ATS T R P+A
Sbjct: 500 RVAVPSTPSVRSASRAMTSPRTPLPRVKNTQNPSRSISAEPPSATS--TANRRHPTA 554
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 28.3 bits (60), Expect = 1.3
Identities = 30/94 (31%), Positives = 41/94 (43%)
Frame = +3
Query: 489 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTL 668
P C P C P S P + P+ S+ S T S + + +S TTL
Sbjct: 84 PTCCEPGSECIYNG----PYYSQCIPVDIDPSS--SSSSAASSTTSTTSSSSLVSS-TTL 136
Query: 669 *RSSPSAATRSLPPPSGKSFVTSRRSCATSLLTS 770
SSPSA + + PS S ++S S +TS TS
Sbjct: 137 TSSSPSAVSSTTSIPSISSTISS--SVSTSSFTS 168
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 275 VPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 186
+ L+ K+PS PY SRP A S TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 495 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTT 665
C +PS+ C + PV + T S TP P+T + +PTP+ T T+Q+T
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTST--TTTAQST 876
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 513 PCSRCTRPVVPPVSCWTPATVSPTPCPST 599
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 127
Score = 27.1 bits (57), Expect = 3.0
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = -2
Query: 304 FEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIVYY 125
F G +F CLI++IR +SH D EHG II C T L G I+YY
Sbjct: 47 FAGLGIAFIYCLIAFIRE-MSHPSSR-------KDTMEHGL-PIILCST-LMLVGNILYY 96
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 489 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 596
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -3
Query: 267 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 151
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 410 LLTEAPLNPKANREKMTQIMFETFN 484
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 304 FEGQDTSFALCLISYIRVLLSHTDHHA 224
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 675 SSPSAATRSLPPPSGK 722
++PS RSLPPPSG+
Sbjct: 636 ATPSNPPRSLPPPSGQ 651
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 7.0
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 567 ATVSPTPCPSTKDTHSPTPSCVWT*PVATSQTTL*RSSPSAATRSLPPPSGKSFVTSRRS 746
AT S T P++ T + S V T+ +T+ ++ SAAT S SG S VTS +
Sbjct: 1083 ATASVTGSPTSSVTAVSSTSSV----EGTASSTI-AAAASAATLSSDAASGSSTVTSSAT 1137
Query: 747 CATS 758
++S
Sbjct: 1138 ASSS 1141
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 25.8 bits (54), Expect = 7.0
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 510 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P-VATSQT 662
KP S+ TRP +P +T T S P P + + ++ P V++SQ+
Sbjct: 65 KPSSKATRPYIP---SYTRLTYSVPPLPIPPPSEQSLDTIIYRNPSVSSSQS 113
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 25.4 bits (53), Expect = 9.3
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +1
Query: 529 RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPYEDPH 681
R RS HR+ G RR P+R HL R RH + R R H
Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHLSRHH---RHSTTNYHSKRDDRYERRREH 187
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 9.3
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 424 SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRR 573
+PQ + E++ D++R++ +RH RR P +A + R H + R R
Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR 1474
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,428,197
Number of Sequences: 5004
Number of extensions: 78604
Number of successful extensions: 326
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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