Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1485
         (802 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0154 - 1094256-1094672,1094954-1094977,1095867-1095891,109...    28   7.5  
02_05_0316 - 27825871-27826509                                         28   9.9  

>07_01_0154 -
           1094256-1094672,1094954-1094977,1095867-1095891,
           1096014-1096304,1096391-1096470,1096953-1097052,
           1097143-1097204,1097650-1097750,1097940-1098117,
           1098298-1098924,1099014-1099100,1099804-1099905,
           1100265-1100348,1100580-1100657
          Length = 751

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 22/82 (26%), Positives = 39/82 (47%)
 Frame = -2

Query: 762 RFNKQILNVFLFIDSIFTGTHA*VLRGFKINFMYLILAGFVSPTDYS*HCDAKGSAQ*CL 583
           R+  +++   LF  SIF   H   L    +++ +L+L  ++   D   HC A+   + CL
Sbjct: 446 RWASELIGGKLF-SSIFDPVHVFHLLLLLLHYDHLVLVDYLISKDVGVHC-AQYLLR-CL 502

Query: 582 NIYLQNFHCSTDLTFYNKQFWK 517
            +  Q +H  TD + Y  +  K
Sbjct: 503 RLVTQCWHSFTDDSIYEAKIEK 524


>02_05_0316 - 27825871-27826509
          Length = 212

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +1

Query: 451 GCQQGQWQS*VAAKSKPFQFKRLPELFVVES*VCRTVKIL*VNIKALLCRAL-CITMLTI 627
           G  +G W S  A + +  +F+ +P + + E+        L  +  A +C    C   L+ 
Sbjct: 64  GMAEG-WASSSALQHRRPEFRAIPPMAIEEALPVVRFDELVASAPAAVCGGGDCAVCLSG 122

Query: 628 VCGRDEARQ 654
           +CGRDE R+
Sbjct: 123 ICGRDEVRR 131


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,000,316
Number of Sequences: 37544
Number of extensions: 260670
Number of successful extensions: 416
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)