Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1484
         (469 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    27   0.43 
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       25   1.7  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   7.0  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    23   7.0  

>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 26.6 bits (56), Expect = 0.43
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -2

Query: 414 WLLEPIDIYNVNAPPTLRYKF*GLKYSYNGCPTLQTETHYCFMAEIG 274
           ++ +P D YNVN   T   +   L+ +   C  L  E+  C+    G
Sbjct: 98  FVTDPADAYNVNRTETCLQELPALELNAEKCCGLAFESFLCYYYNYG 144


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 444 GRAHSPPGVKWLLEPIDIYNVNAPPTLRYKF*GLKYSYNGCP-TLQTETH 298
           G  H P   +    P+++Y V      R++F  +  + + CP  LQ E H
Sbjct: 257 GTYHDPKKNETTQTPLEVYTVRRGARFRFRF--INAASHVCPLQLQIEDH 304


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 300  HYCFMAEIGWVVVPIRADSQEVLP 229
            H  F AEIG  +V    DS E+LP
Sbjct: 939  HIEFHAEIGMSLVLKVGDSSEMLP 962


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 129 FKEHTYYYIQNEQFYFEH 182
           +  + YYY+QN   Y +H
Sbjct: 136 YSHNQYYYMQNYSNYSQH 153


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,427
Number of Sequences: 2352
Number of extensions: 9061
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)