Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1481
         (737 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648           29   2.9  
01_03_0012 + 11638363-11638476,11638854-11640678,11641855-116420...    29   5.1  
11_01_0066 - 536281-537196,537397-537452                               28   6.7  
04_04_1027 - 30216859-30217212,30218769-30219178,30219395-30219800     28   6.7  
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510...    28   6.7  
03_05_0794 + 27764627-27765142                                         28   8.9  
01_06_1749 - 39636951-39638102                                         28   8.9  
01_06_1119 - 34640611-34640721,34640995-34641075,34641437-346414...    28   8.9  

>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
          Length = 487

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -1

Query: 590 GTLAPRRNQLFLSRAYCNALSNFSAPANTLRA 495
           GTL  RR+     RA+C+AL+  SA A T  A
Sbjct: 183 GTLFSRRDSFITHRAFCDALAEESARAVTAAA 214


>01_03_0012 +
           11638363-11638476,11638854-11640678,11641855-11642096,
           11642198-11642327,11642464-11642774
          Length = 873

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 624 VAPSPHPIPPLNPQNVLFREALQKCSLR 707
           VA +PH + P+   +V+F+     CSLR
Sbjct: 28  VAEAPHDVDPMTNGHVVFQRVENNCSLR 55


>11_01_0066 - 536281-537196,537397-537452
          Length = 323

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 597 DSTPRGPATVAPSPHPIPPLNP 662
           D  P  P T+A  P P+PP +P
Sbjct: 194 DPAPPTPPTIARPPRPLPPASP 215


>04_04_1027 - 30216859-30217212,30218769-30219178,30219395-30219800
          Length = 389

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 597 DSTPRGPATVAPSPHPIPPLNPQNV 671
           D  P  PA V P P P PP  P NV
Sbjct: 16  DLGPPAPAPVPPPPPPPPPPPPANV 40


>03_02_0027 +
           5100865-5100878,5102241-5102708,5102795-5103021,
           5103670-5104577
          Length = 538

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 590 GTLAPRRNQLFLSRAYCNALSNFSAPA 510
           GTL  RR+     RA+C+AL+  SA A
Sbjct: 156 GTLFSRRDSFITHRAFCDALAEESAKA 182


>03_05_0794 + 27764627-27765142
          Length = 171

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 676 NNTFCGFNGGMGWGEGATVAGPR 608
           NN   G +GG  WGE A V G R
Sbjct: 34  NNRDSGVSGGGSWGESACVHGSR 56


>01_06_1749 - 39636951-39638102
          Length = 383

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 321 SSIVRTAAPPFKPKRITA 268
           SS+   AAPPF P RIT+
Sbjct: 164 SSVASAAAPPFDPSRITS 181


>01_06_1119 -
           34640611-34640721,34640995-34641075,34641437-34641496,
           34641596-34641645,34641758-34641809,34642462-34642599,
           34642716-34642979,34643057-34643114,34643178-34643287,
           34643650-34643925
          Length = 399

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 600 STPRGPATVAPSPHPIPPLNP 662
           S PR P  +  SP P+PP  P
Sbjct: 35  SAPRAPLFLLASPRPVPPRRP 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,254,271
Number of Sequences: 37544
Number of extensions: 428263
Number of successful extensions: 1437
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)