Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1481
         (737 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131543-1|BAD18678.1|  205|Homo sapiens protein ( Homo sapiens ...    35   0.27 
BC007587-1|AAH07587.1|  839|Homo sapiens LPHN1 protein protein.        30   10.0 
BC002974-1|AAH02974.1|  154|Homo sapiens LPHN1 protein protein.        30   10.0 
AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein.            30   10.0 
AF307079-1|AAG27461.1| 1469|Homo sapiens lectomedin-2 protein.         30   10.0 
AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of r...    30   10.0 
AB065919-1|BAC06134.1| 1474|Homo sapiens seven transmembrane hel...    30   10.0 
AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.     30   10.0 

>AK131543-1|BAD18678.1|  205|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16779 fis, clone BRHIP3038037. ).
          Length = 205

 Score = 35.1 bits (77), Expect = 0.27
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 603 TPRGPATVAPSPHPIPPLNPQNVLFREALQKCSLRIP 713
           +PR  A+  P PHP+PP +PQ     +     +LR+P
Sbjct: 140 SPRAAASTPPPPHPVPPSSPQPPAQPQPRVTAALRLP 176


>BC007587-1|AAH07587.1|  839|Homo sapiens LPHN1 protein protein.
          Length = 839

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 597 DSTPRGPATVAPSPHPIPPLNPQ 665
           DS+P GP+   P P P PP  P+
Sbjct: 764 DSSPEGPSEALPPPPPAPPGPPE 786


>BC002974-1|AAH02974.1|  154|Homo sapiens LPHN1 protein protein.
          Length = 154

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 597 DSTPRGPATVAPSPHPIPPLNPQ 665
           DS+P GP+   P P P PP  P+
Sbjct: 79  DSSPEGPSEALPPPPPAPPGPPE 101


>AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein.
          Length = 2461

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +3

Query: 597 DSTPRGPATVAPSPHPIPPL--NPQNVLFREALQKCSLRIP 713
           +STP   AT+AP+P P PP   +P  V+ +E  ++ +   P
Sbjct: 777 ESTPASEATLAPTPPPAPPFPSSPPPVVPKEEKEEETAAAP 817


>AF307079-1|AAG27461.1| 1469|Homo sapiens lectomedin-2 protein.
          Length = 1469

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 597  DSTPRGPATVAPSPHPIPPLNPQ 665
            DS+P GP+   P P P PP  P+
Sbjct: 1394 DSSPEGPSEALPPPPPAPPGPPE 1416


>AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of
           retinoic acid and thyroid hormone receptor extended
           isofo protein.
          Length = 2507

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +3

Query: 597 DSTPRGPATVAPSPHPIPPL--NPQNVLFREALQKCSLRIP 713
           +STP   AT+AP+P P PP   +P  V+ +E  ++ +   P
Sbjct: 777 ESTPASEATLAPTPPPAPPFPSSPPPVVPKEEKEEETAAAP 817


>AB065919-1|BAC06134.1| 1474|Homo sapiens seven transmembrane helix
            receptor protein.
          Length = 1474

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 597  DSTPRGPATVAPSPHPIPPLNPQ 665
            DS+P GP+   P P P PP  P+
Sbjct: 1399 DSSPEGPSEALPPPPPAPPGPPE 1421


>AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.
          Length = 1566

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 597  DSTPRGPATVAPSPHPIPPLNPQ 665
            DS+P GP+   P P P PP  P+
Sbjct: 1491 DSSPEGPSEALPPPPPAPPGPPE 1513


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,333,098
Number of Sequences: 237096
Number of extensions: 2366209
Number of successful extensions: 6191
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6178
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)