Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1481
         (737 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070948-1|AAL48570.1|  189|Drosophila melanogaster RE04191p pro...    29   6.6  
AE013599-2440|AAF57886.2|  189|Drosophila melanogaster CG30457-P...    29   6.6  
AY069778-1|AAL39923.1|  373|Drosophila melanogaster SD01985p pro...    29   8.7  

>AY070948-1|AAL48570.1|  189|Drosophila melanogaster RE04191p
           protein.
          Length = 189

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 615 PATVAPSPHPIPPLNPQNVL 674
           P  VAP+P P+P L PQ VL
Sbjct: 146 PVKVAPAPAPVPVLAPQPVL 165


>AE013599-2440|AAF57886.2|  189|Drosophila melanogaster CG30457-PA
           protein.
          Length = 189

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 615 PATVAPSPHPIPPLNPQNVL 674
           P  VAP+P P+P L PQ VL
Sbjct: 146 PVKVAPAPAPVPVLAPQPVL 165


>AY069778-1|AAL39923.1|  373|Drosophila melanogaster SD01985p
           protein.
          Length = 373

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 603 TPRGPATVAPSPHPIPP 653
           TP  P T+ P PHP PP
Sbjct: 346 TPISPPTLRPHPHPAPP 362


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,751,117
Number of Sequences: 53049
Number of extensions: 719750
Number of successful extensions: 2230
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2230
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)