Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1479
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-972|AAN12101.1|  625|Drosophila melanogaster CG10596-PC...    61   3e-12
BT001836-1|AAN71591.1|  617|Drosophila melanogaster RH50422p pro...    61   3e-12
AE014296-971|AAF50768.1|  617|Drosophila melanogaster CG10596-PA...    61   3e-12
S81027-1|AAB36035.1|  608|Drosophila melanogaster Msr-110 protein.     61   3e-12
AY118587-1|AAM49956.1|  608|Drosophila melanogaster LD44960p pro...    61   3e-12
AE014296-970|AAN12100.1|  608|Drosophila melanogaster CG10596-PB...    61   3e-12

>AE014296-972|AAN12101.1|  625|Drosophila melanogaster CG10596-PC,
           isoform C protein.
          Length = 625

 Score = 60.9 bits (141), Expect(2) = 3e-12
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
 Frame = +3

Query: 357 KLPIQFDLDELAGAFLANNQKGRMNCVVERRN-----DDPMER-RFPFNILGAFAPRSAH 518
           K+P++ DL +LA A L NN+K RMNCVVER++     D P +    PF +     P+ A 
Sbjct: 177 KMPLELDLSDLAAAILRNNKKSRMNCVVERKHAEEIVDSPSKTVALPFGVNLTTDPKKAR 236

Query: 519 --AERVAIICHGGDE 557
              ER++I C GGD+
Sbjct: 237 ITGERISIFCDGGDD 251



 Score = 29.5 bits (63), Expect(2) = 3e-12
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = +3

Query: 3   QLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHALHGVPPMLSSVLPETSQPSSSR 182
           Q++ LD++L+KEL LE        L   EPL    A A       L S+ PE+ +  +++
Sbjct: 93  QVQALDSVLEKELMLETLQQVGKELPRAEPLLGGAAGAAD--DSELQSLEPESRKTEATQ 150

Query: 183 PSLFKDDALNHAESKINEDKLQK 251
            +    D  N        D+LQK
Sbjct: 151 DAEEHPDKDNSYSDSDETDELQK 173


>BT001836-1|AAN71591.1|  617|Drosophila melanogaster RH50422p
           protein.
          Length = 617

 Score = 60.9 bits (141), Expect(2) = 3e-12
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
 Frame = +3

Query: 357 KLPIQFDLDELAGAFLANNQKGRMNCVVERRN-----DDPMER-RFPFNILGAFAPRSAH 518
           K+P++ DL +LA A L NN+K RMNCVVER++     D P +    PF +     P+ A 
Sbjct: 169 KMPLELDLSDLAAAILRNNRKSRMNCVVERKHAEEIVDSPSKTVALPFGVNLTTDPKKAR 228

Query: 519 --AERVAIICHGGDE 557
              ER++I C GGD+
Sbjct: 229 ITGERISIFCDGGDD 243



 Score = 29.5 bits (63), Expect(2) = 3e-12
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = +3

Query: 3   QLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHALHGVPPMLSSVLPETSQPSSSR 182
           Q++ LD++L+KEL LE        L   EPL    A A       L S+ PE+ +  +++
Sbjct: 85  QVQALDSVLEKELMLETLQQVGKELPRAEPLLGGAAGAAD--DSELQSLEPESRKTEATQ 142

Query: 183 PSLFKDDALNHAESKINEDKLQK 251
            +    D  N        D+LQK
Sbjct: 143 DAEEHPDKDNSYSDSDETDELQK 165


>AE014296-971|AAF50768.1|  617|Drosophila melanogaster CG10596-PA,
           isoform A protein.
          Length = 617

 Score = 60.9 bits (141), Expect(2) = 3e-12
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
 Frame = +3

Query: 357 KLPIQFDLDELAGAFLANNQKGRMNCVVERRN-----DDPMER-RFPFNILGAFAPRSAH 518
           K+P++ DL +LA A L NN+K RMNCVVER++     D P +    PF +     P+ A 
Sbjct: 169 KMPLELDLSDLAAAILRNNKKSRMNCVVERKHAEEIVDSPSKTVALPFGVNLTTDPKKAR 228

Query: 519 --AERVAIICHGGDE 557
              ER++I C GGD+
Sbjct: 229 ITGERISIFCDGGDD 243



 Score = 29.5 bits (63), Expect(2) = 3e-12
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = +3

Query: 3   QLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHALHGVPPMLSSVLPETSQPSSSR 182
           Q++ LD++L+KEL LE        L   EPL    A A       L S+ PE+ +  +++
Sbjct: 85  QVQALDSVLEKELMLETLQQVGKELPRAEPLLGGAAGAAD--DSELQSLEPESRKTEATQ 142

Query: 183 PSLFKDDALNHAESKINEDKLQK 251
            +    D  N        D+LQK
Sbjct: 143 DAEEHPDKDNSYSDSDETDELQK 165


>S81027-1|AAB36035.1|  608|Drosophila melanogaster Msr-110 protein.
          Length = 608

 Score = 60.9 bits (141), Expect(2) = 3e-12
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
 Frame = +3

Query: 357 KLPIQFDLDELAGAFLANNQKGRMNCVVERRN-----DDPMER-RFPFNILGAFAPRSAH 518
           K+P++ DL +LA A L NN+K RMNCVVER++     D P +    PF +     P+ A 
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNCVVERKHAEEIVDSPSKTVALPFGVNLTTDPKKAR 219

Query: 519 --AERVAIICHGGDE 557
              ER++I C GGD+
Sbjct: 220 ITGERISIFCDGGDD 234



 Score = 29.5 bits (63), Expect(2) = 3e-12
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = +3

Query: 3   QLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHALHGVPPMLSSVLPETSQPSSSR 182
           Q++ LD++L+KEL LE        L   EPL    A A       L S+ PE+ +  +++
Sbjct: 76  QVQALDSVLEKELMLETLQQVGKELPRAEPLLGGAAGAAD--DSELQSLEPESRKTEATQ 133

Query: 183 PSLFKDDALNHAESKINEDKLQK 251
            +    D  N        D+LQK
Sbjct: 134 DAEEHPDKDNSYSDSDETDELQK 156


>AY118587-1|AAM49956.1|  608|Drosophila melanogaster LD44960p
           protein.
          Length = 608

 Score = 60.9 bits (141), Expect(2) = 3e-12
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
 Frame = +3

Query: 357 KLPIQFDLDELAGAFLANNQKGRMNCVVERRN-----DDPMER-RFPFNILGAFAPRSAH 518
           K+P++ DL +LA A L NN+K RMNCVVER++     D P +    PF +     P+ A 
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNCVVERKHAEEIVDSPSKTVALPFGVNLTTDPKKAR 219

Query: 519 --AERVAIICHGGDE 557
              ER++I C GGD+
Sbjct: 220 ITGERISIFCDGGDD 234



 Score = 29.5 bits (63), Expect(2) = 3e-12
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = +3

Query: 3   QLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHALHGVPPMLSSVLPETSQPSSSR 182
           Q++ LD++L+KEL LE        L   EPL    A A       L S+ PE+ +  +++
Sbjct: 76  QVQALDSVLEKELMLETLQQVGKELPRAEPLLGGAAGAAD--DSELQSLEPESRKTEATQ 133

Query: 183 PSLFKDDALNHAESKINEDKLQK 251
            +    D  N        D+LQK
Sbjct: 134 DAEEHPDKDNSYSDSDETDELQK 156


>AE014296-970|AAN12100.1|  608|Drosophila melanogaster CG10596-PB,
           isoform B protein.
          Length = 608

 Score = 60.9 bits (141), Expect(2) = 3e-12
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
 Frame = +3

Query: 357 KLPIQFDLDELAGAFLANNQKGRMNCVVERRN-----DDPMER-RFPFNILGAFAPRSAH 518
           K+P++ DL +LA A L NN+K RMNCVVER++     D P +    PF +     P+ A 
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNCVVERKHAEEIVDSPSKTVALPFGVNLTTDPKKAR 219

Query: 519 --AERVAIICHGGDE 557
              ER++I C GGD+
Sbjct: 220 ITGERISIFCDGGDD 234



 Score = 29.5 bits (63), Expect(2) = 3e-12
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = +3

Query: 3   QLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHALHGVPPMLSSVLPETSQPSSSR 182
           Q++ LD++L+KEL LE        L   EPL    A A       L S+ PE+ +  +++
Sbjct: 76  QVQALDSVLEKELMLETLQQVGKELPRAEPLLGGAAGAAD--DSELQSLEPESRKTEATQ 133

Query: 183 PSLFKDDALNHAESKINEDKLQK 251
            +    D  N        D+LQK
Sbjct: 134 DAEEHPDKDNSYSDSDETDELQK 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,898,482
Number of Sequences: 53049
Number of extensions: 745138
Number of successful extensions: 2660
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2647
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)