Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1477
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   1.7  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    25   2.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.9  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 654 QLIKSNIW*VLVWS 613
           Q++KSN+W  LVWS
Sbjct: 71  QIMKSNVWLRLVWS 84


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -2

Query: 452 RFLLNLNPTDS*ILPSSDQNSVIL 381
           +F++ L+P D+ I+  SDQ+SV +
Sbjct: 533 KFVVKLHPGDNRIIRRSDQSSVTI 556


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 418  QESVGLRFNKNRTTAHYNKVLICS 489
            QE + L+FNK  + A  N+  +CS
Sbjct: 3293 QEILPLQFNKASSMATINEYRVCS 3316


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,922
Number of Sequences: 2352
Number of extensions: 11752
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)